Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11715 and A4249_RS16970 are separated by 443 nucleotides A4249_RS16970 and A4249_RS11720 are separated by 151 nucleotides A4249_RS11720 and A4249_RS11725 are separated by 170 nucleotides A4249_RS11725 and A4249_RS11730 are separated by 115 nucleotides
A4249_RS11715: A4249_RS11715 - hypothetical protein, at 2,350,604 to 2,351,641
_RS11715
A4249_RS16970: A4249_RS16970 - hypothetical protein, at 2,352,085 to 2,352,231
_RS16970
A4249_RS11720: A4249_RS11720 - strawberry notch C-terminal domain-containing protein, at 2,352,383 to 2,353,624
_RS11720
A4249_RS11725: A4249_RS11725 - hypothetical protein, at 2,353,795 to 2,354,100
_RS11725
A4249_RS11730: A4249_RS11730 - DUF305 domain-containing protein, at 2,354,216 to 2,354,653
_RS11730
Position (kb)
2352
2353
2354 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2351.639 kb on + strand at 2351.639 kb on + strand at 2351.640 kb on - strand at 2351.669 kb on + strand at 2351.670 kb on - strand at 2351.670 kb on - strand at 2351.670 kb on - strand at 2351.670 kb on - strand at 2351.670 kb on - strand at 2351.673 kb on + strand at 2351.673 kb on + strand at 2351.673 kb on + strand at 2351.673 kb on + strand at 2351.673 kb on + strand at 2351.673 kb on + strand at 2351.673 kb on + strand at 2351.673 kb on + strand at 2351.673 kb on + strand at 2351.674 kb on - strand at 2351.674 kb on - strand at 2351.674 kb on - strand at 2351.674 kb on - strand at 2351.674 kb on - strand at 2351.674 kb on - strand at 2351.674 kb on - strand at 2351.674 kb on - strand at 2351.683 kb on - strand at 2351.683 kb on - strand at 2351.683 kb on - strand at 2351.683 kb on - strand at 2351.683 kb on - strand at 2351.746 kb on + strand at 2351.746 kb on + strand at 2351.746 kb on + strand at 2351.746 kb on + strand at 2351.746 kb on + strand at 2351.746 kb on + strand at 2351.746 kb on + strand at 2351.746 kb on + strand at 2351.747 kb on - strand at 2351.747 kb on - strand at 2351.747 kb on - strand at 2351.747 kb on - strand at 2351.807 kb on - strand at 2351.858 kb on + strand at 2351.880 kb on + strand at 2351.881 kb on - strand at 2351.883 kb on + strand at 2351.883 kb on + strand at 2351.883 kb on + strand at 2351.883 kb on + strand at 2351.884 kb on - strand at 2351.884 kb on - strand at 2351.884 kb on - strand at 2351.884 kb on - strand at 2351.884 kb on - strand at 2351.884 kb on - strand at 2351.887 kb on + strand at 2351.923 kb on + strand at 2351.923 kb on + strand at 2351.924 kb on - strand at 2352.001 kb on + strand at 2352.001 kb on + strand at 2352.001 kb on + strand at 2352.001 kb on + strand at 2352.001 kb on + strand at 2352.001 kb on + strand at 2352.001 kb on + strand at 2352.001 kb on + strand at 2352.002 kb on - strand at 2352.002 kb on - strand at 2352.002 kb on - strand at 2352.002 kb on - strand at 2352.002 kb on - strand at 2352.002 kb on - strand at 2352.002 kb on - strand at 2352.002 kb on - strand at 2352.005 kb on + strand at 2352.005 kb on + strand at 2352.005 kb on + strand at 2352.005 kb on + strand at 2352.006 kb on - strand at 2352.006 kb on - strand at 2352.006 kb on - strand at 2352.006 kb on - strand at 2352.036 kb on + strand at 2352.036 kb on + strand at 2352.036 kb on + strand at 2352.036 kb on + strand at 2352.036 kb on + strand at 2352.036 kb on + strand at 2352.036 kb on + strand at 2352.036 kb on + strand at 2352.036 kb on + strand at 2352.037 kb on - strand at 2352.041 kb on + strand at 2352.041 kb on + strand at 2352.042 kb on - strand at 2352.042 kb on - strand at 2352.059 kb on + strand at 2352.059 kb on + strand at 2352.059 kb on + strand at 2352.059 kb on + strand at 2352.059 kb on + strand at 2352.060 kb on - strand at 2352.060 kb on - strand at 2352.120 kb on + strand, within A4249_RS16970 at 2352.120 kb on + strand, within A4249_RS16970 at 2352.120 kb on + strand, within A4249_RS16970 at 2352.131 kb on + strand, within A4249_RS16970 at 2352.131 kb on + strand, within A4249_RS16970 at 2352.131 kb on + strand, within A4249_RS16970 at 2352.131 kb on + strand, within A4249_RS16970 at 2352.131 kb on + strand, within A4249_RS16970 at 2352.131 kb on + strand, within A4249_RS16970 at 2352.131 kb on + strand, within A4249_RS16970 at 2352.132 kb on - strand, within A4249_RS16970 at 2352.132 kb on - strand, within A4249_RS16970 at 2352.170 kb on + strand, within A4249_RS16970 at 2352.277 kb on - strand at 2352.521 kb on + strand, within A4249_RS11720 at 2352.522 kb on - strand, within A4249_RS11720 at 2353.523 kb on + strand at 2353.523 kb on + strand at 2353.524 kb on - strand at 2353.524 kb on - strand at 2353.638 kb on + strand at 2353.638 kb on + strand at 2353.638 kb on + strand at 2353.638 kb on + strand at 2353.638 kb on + strand at 2353.638 kb on + strand at 2353.638 kb on + strand at 2353.638 kb on + strand at 2353.639 kb on - strand at 2353.723 kb on + strand at 2353.897 kb on + strand, within A4249_RS11725 at 2353.897 kb on + strand, within A4249_RS11725 at 2353.897 kb on + strand, within A4249_RS11725 at 2353.897 kb on + strand, within A4249_RS11725 at 2353.897 kb on + strand, within A4249_RS11725 at 2353.897 kb on + strand, within A4249_RS11725 at 2353.897 kb on + strand, within A4249_RS11725 at 2353.897 kb on + strand, within A4249_RS11725 at 2353.897 kb on + strand, within A4249_RS11725 at 2353.897 kb on + strand, within A4249_RS11725 at 2353.897 kb on + strand, within A4249_RS11725 at 2353.897 kb on + strand, within A4249_RS11725 at 2353.897 kb on + strand, within A4249_RS11725 at 2353.897 kb on + strand, within A4249_RS11725 at 2353.897 kb on + strand, within A4249_RS11725 at 2353.897 kb on + strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.898 kb on - strand, within A4249_RS11725 at 2353.955 kb on + strand, within A4249_RS11725 at 2353.955 kb on + strand, within A4249_RS11725 at 2353.956 kb on - strand, within A4249_RS11725 at 2353.956 kb on - strand, within A4249_RS11725 at 2353.956 kb on - strand, within A4249_RS11725 at 2354.015 kb on + strand, within A4249_RS11725 at 2354.016 kb on - strand, within A4249_RS11725 at 2354.016 kb on - strand, within A4249_RS11725 at 2354.126 kb on + strand at 2354.127 kb on - strand at 2354.128 kb on + strand at 2354.128 kb on + strand at 2354.128 kb on + strand at 2354.128 kb on + strand at 2354.128 kb on + strand at 2354.128 kb on + strand at 2354.129 kb on - strand at 2354.129 kb on - strand at 2354.129 kb on - strand at 2354.129 kb on - strand at 2354.129 kb on - strand at 2354.129 kb on - strand at 2354.129 kb on - strand at 2354.153 kb on + strand at 2354.154 kb on - strand at 2354.154 kb on - strand at 2354.269 kb on + strand, within A4249_RS11730 at 2354.270 kb on - strand, within A4249_RS11730 at 2354.270 kb on - strand, within A4249_RS11730 at 2354.427 kb on + strand, within A4249_RS11730 at 2354.427 kb on + strand, within A4249_RS11730 at 2354.428 kb on - strand, within A4249_RS11730 at 2354.440 kb on + strand, within A4249_RS11730 at 2354.441 kb on - strand, within A4249_RS11730 at 2354.472 kb on + strand, within A4249_RS11730 at 2354.472 kb on + strand, within A4249_RS11730 at 2354.472 kb on + strand, within A4249_RS11730 at 2354.473 kb on - strand, within A4249_RS11730 at 2354.473 kb on - strand, within A4249_RS11730 at 2354.473 kb on - strand, within A4249_RS11730 at 2354.473 kb on - strand, within A4249_RS11730 at 2354.473 kb on - strand, within A4249_RS11730 at 2354.473 kb on - strand, within A4249_RS11730
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 2,351,639 + +0.8 2,351,639 + +0.7 2,351,640 - +0.1 2,351,669 + -0.8 2,351,670 - -0.3 2,351,670 - -0.4 2,351,670 - +0.8 2,351,670 - +0.0 2,351,670 - -0.5 2,351,673 + +0.4 2,351,673 + -1.4 2,351,673 + -2.2 2,351,673 + -0.1 2,351,673 + -0.8 2,351,673 + +0.7 2,351,673 + -0.6 2,351,673 + +0.5 2,351,673 + -0.6 2,351,674 - +0.2 2,351,674 - -0.2 2,351,674 - -0.7 2,351,674 - +0.3 2,351,674 - +0.5 2,351,674 - -0.1 2,351,674 - +0.0 2,351,674 - -0.2 2,351,683 - +0.6 2,351,683 - +0.7 2,351,683 - -1.3 2,351,683 - +0.9 2,351,683 - -0.6 2,351,746 + -0.3 2,351,746 + +1.2 2,351,746 + -0.3 2,351,746 + +0.1 2,351,746 + +0.3 2,351,746 + +0.1 2,351,746 + +1.9 2,351,746 + +0.9 2,351,747 - +0.5 2,351,747 - +0.9 2,351,747 - -0.0 2,351,747 - -1.7 2,351,807 - +0.8 2,351,858 + +0.1 2,351,880 + +1.0 2,351,881 - +1.0 2,351,883 + -0.9 2,351,883 + -0.6 2,351,883 + +0.2 2,351,883 + -0.0 2,351,884 - +0.7 2,351,884 - -0.5 2,351,884 - +0.8 2,351,884 - -0.8 2,351,884 - +0.0 2,351,884 - +0.6 2,351,887 + -0.8 2,351,923 + -0.1 2,351,923 + -0.8 2,351,924 - -0.4 2,352,001 + -0.1 2,352,001 + -0.5 2,352,001 + +0.5 2,352,001 + +1.0 2,352,001 + -0.1 2,352,001 + +1.1 2,352,001 + +1.7 2,352,001 + +0.7 2,352,002 - -1.1 2,352,002 - +0.1 2,352,002 - -0.2 2,352,002 - -2.0 2,352,002 - -1.3 2,352,002 - -0.2 2,352,002 - +1.1 2,352,002 - -0.6 2,352,005 + +0.9 2,352,005 + -0.2 2,352,005 + -0.6 2,352,005 + -1.8 2,352,006 - +0.9 2,352,006 - -0.0 2,352,006 - +0.2 2,352,006 - +0.5 2,352,036 + +0.6 2,352,036 + -0.2 2,352,036 + -0.6 2,352,036 + -0.6 2,352,036 + -1.2 2,352,036 + +0.5 2,352,036 + -0.2 2,352,036 + +0.3 2,352,036 + -1.5 2,352,037 - -1.1 2,352,041 + +0.1 2,352,041 + -0.1 2,352,042 - -0.2 2,352,042 - +0.3 2,352,059 + +0.6 2,352,059 + -0.6 2,352,059 + +0.1 2,352,059 + -0.6 2,352,059 + +0.1 2,352,060 - +1.1 2,352,060 - -0.9 2,352,120 + A4249_RS16970 0.24 -1.0 2,352,120 + A4249_RS16970 0.24 -1.1 2,352,120 + A4249_RS16970 0.24 +0.0 2,352,131 + A4249_RS16970 0.31 -0.1 2,352,131 + A4249_RS16970 0.31 -0.2 2,352,131 + A4249_RS16970 0.31 +0.1 2,352,131 + A4249_RS16970 0.31 -0.5 2,352,131 + A4249_RS16970 0.31 +0.8 2,352,131 + A4249_RS16970 0.31 -1.2 2,352,131 + A4249_RS16970 0.31 +0.2 2,352,132 - A4249_RS16970 0.32 +0.9 2,352,132 - A4249_RS16970 0.32 -3.5 2,352,170 + A4249_RS16970 0.58 -0.5 2,352,277 - +1.3 2,352,521 + A4249_RS11720 0.11 -0.9 2,352,522 - A4249_RS11720 0.11 -1.7 2,353,523 + -0.8 2,353,523 + -0.5 2,353,524 - +1.9 2,353,524 - +0.5 2,353,638 + +0.1 2,353,638 + -0.5 2,353,638 + -0.5 2,353,638 + +0.3 2,353,638 + +0.5 2,353,638 + +0.8 2,353,638 + +0.4 2,353,638 + +0.4 2,353,639 - -0.3 2,353,723 + +0.3 2,353,897 + A4249_RS11725 0.33 -0.3 2,353,897 + A4249_RS11725 0.33 +1.7 2,353,897 + A4249_RS11725 0.33 +1.0 2,353,897 + A4249_RS11725 0.33 +0.9 2,353,897 + A4249_RS11725 0.33 +0.9 2,353,897 + A4249_RS11725 0.33 -0.0 2,353,897 + A4249_RS11725 0.33 -0.8 2,353,897 + A4249_RS11725 0.33 -1.2 2,353,897 + A4249_RS11725 0.33 -0.4 2,353,897 + A4249_RS11725 0.33 -0.7 2,353,897 + A4249_RS11725 0.33 +0.6 2,353,897 + A4249_RS11725 0.33 +0.8 2,353,897 + A4249_RS11725 0.33 -0.3 2,353,897 + A4249_RS11725 0.33 -1.4 2,353,897 + A4249_RS11725 0.33 -1.5 2,353,897 + A4249_RS11725 0.33 -0.1 2,353,898 - A4249_RS11725 0.34 -0.3 2,353,898 - A4249_RS11725 0.34 -0.6 2,353,898 - A4249_RS11725 0.34 +0.1 2,353,898 - A4249_RS11725 0.34 -0.1 2,353,898 - A4249_RS11725 0.34 +0.5 2,353,898 - A4249_RS11725 0.34 +0.0 2,353,898 - A4249_RS11725 0.34 -0.3 2,353,898 - A4249_RS11725 0.34 +1.0 2,353,898 - A4249_RS11725 0.34 -1.1 2,353,898 - A4249_RS11725 0.34 +0.1 2,353,898 - A4249_RS11725 0.34 +0.0 2,353,898 - A4249_RS11725 0.34 -1.0 2,353,898 - A4249_RS11725 0.34 +0.3 2,353,898 - A4249_RS11725 0.34 +0.6 2,353,898 - A4249_RS11725 0.34 -1.1 2,353,898 - A4249_RS11725 0.34 +0.2 2,353,898 - A4249_RS11725 0.34 -0.9 2,353,898 - A4249_RS11725 0.34 +0.8 2,353,898 - A4249_RS11725 0.34 -0.3 2,353,955 + A4249_RS11725 0.52 +0.6 2,353,955 + A4249_RS11725 0.52 +0.5 2,353,956 - A4249_RS11725 0.53 -0.5 2,353,956 - A4249_RS11725 0.53 +1.6 2,353,956 - A4249_RS11725 0.53 -0.5 2,354,015 + A4249_RS11725 0.72 -0.3 2,354,016 - A4249_RS11725 0.72 -0.2 2,354,016 - A4249_RS11725 0.72 -0.9 2,354,126 + -0.9 2,354,127 - -0.6 2,354,128 + +0.5 2,354,128 + +0.1 2,354,128 + +0.6 2,354,128 + -1.5 2,354,128 + +0.2 2,354,128 + +0.8 2,354,129 - +0.2 2,354,129 - -0.4 2,354,129 - +0.2 2,354,129 - +1.5 2,354,129 - -0.6 2,354,129 - -1.0 2,354,129 - +0.4 2,354,153 + +0.4 2,354,154 - -0.4 2,354,154 - +0.7 2,354,269 + A4249_RS11730 0.12 -0.1 2,354,270 - A4249_RS11730 0.12 -0.0 2,354,270 - A4249_RS11730 0.12 -2.0 2,354,427 + A4249_RS11730 0.48 -0.1 2,354,427 + A4249_RS11730 0.48 -1.4 2,354,428 - A4249_RS11730 0.48 -0.3 2,354,440 + A4249_RS11730 0.51 -0.5 2,354,441 - A4249_RS11730 0.51 -0.1 2,354,472 + A4249_RS11730 0.58 -0.2 2,354,472 + A4249_RS11730 0.58 +0.1 2,354,472 + A4249_RS11730 0.58 +0.3 2,354,473 - A4249_RS11730 0.59 -1.0 2,354,473 - A4249_RS11730 0.59 -0.1 2,354,473 - A4249_RS11730 0.59 -0.8 2,354,473 - A4249_RS11730 0.59 -0.4 2,354,473 - A4249_RS11730 0.59 -0.5 2,354,473 - A4249_RS11730 0.59 +1.9
Or see this region's nucleotide sequence