Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11260

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11255 and A4249_RS11260 are separated by 69 nucleotidesA4249_RS11260 and A4249_RS11265 are separated by 115 nucleotidesA4249_RS11265 and A4249_RS11270 overlap by 4 nucleotides A4249_RS11255: A4249_RS11255 - S9 family peptidase, at 2,265,618 to 2,267,729 _RS11255 A4249_RS11260: A4249_RS11260 - S9 family peptidase, at 2,267,799 to 2,269,898 _RS11260 A4249_RS11265: A4249_RS11265 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 2,270,014 to 2,270,868 _RS11265 A4249_RS11270: A4249_RS11270 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE, at 2,270,865 to 2,271,323 _RS11270 Position (kb) 2267 2268 2269 2270Strain fitness (log2 ratio) -2 -1 0 1at 2267.022 kb on - strand, within A4249_RS11255at 2267.155 kb on + strand, within A4249_RS11255at 2267.155 kb on + strand, within A4249_RS11255at 2267.155 kb on + strand, within A4249_RS11255at 2267.155 kb on + strand, within A4249_RS11255at 2267.155 kb on + strand, within A4249_RS11255at 2267.155 kb on + strand, within A4249_RS11255at 2267.155 kb on + strand, within A4249_RS11255at 2267.155 kb on + strand, within A4249_RS11255at 2267.156 kb on - strand, within A4249_RS11255at 2267.233 kb on + strand, within A4249_RS11255at 2267.383 kb on + strand, within A4249_RS11255at 2267.383 kb on + strand, within A4249_RS11255at 2267.384 kb on - strand, within A4249_RS11255at 2267.475 kb on + strand, within A4249_RS11255at 2267.475 kb on + strand, within A4249_RS11255at 2267.476 kb on - strand, within A4249_RS11255at 2267.534 kb on - strandat 2267.542 kb on + strandat 2267.542 kb on + strandat 2267.542 kb on + strandat 2267.543 kb on - strandat 2267.543 kb on - strandat 2267.543 kb on - strandat 2267.543 kb on - strandat 2267.543 kb on - strandat 2267.543 kb on - strandat 2267.543 kb on - strandat 2267.602 kb on + strandat 2267.602 kb on + strandat 2267.602 kb on + strandat 2267.602 kb on + strandat 2267.602 kb on + strandat 2267.602 kb on + strandat 2267.602 kb on + strandat 2267.602 kb on + strandat 2267.602 kb on + strandat 2267.603 kb on - strandat 2267.603 kb on - strandat 2267.603 kb on - strandat 2267.767 kb on + strandat 2267.768 kb on - strandat 2267.768 kb on - strandat 2267.768 kb on - strandat 2267.768 kb on - strandat 2267.816 kb on + strandat 2267.817 kb on - strandat 2267.817 kb on - strandat 2267.817 kb on - strandat 2267.819 kb on - strandat 2268.028 kb on + strand, within A4249_RS11260at 2268.029 kb on - strand, within A4249_RS11260at 2268.029 kb on - strand, within A4249_RS11260at 2268.029 kb on - strand, within A4249_RS11260at 2268.052 kb on + strand, within A4249_RS11260at 2268.052 kb on + strand, within A4249_RS11260at 2268.052 kb on + strand, within A4249_RS11260at 2268.053 kb on - strand, within A4249_RS11260at 2268.053 kb on - strand, within A4249_RS11260at 2268.053 kb on - strand, within A4249_RS11260at 2268.053 kb on - strand, within A4249_RS11260at 2268.053 kb on - strand, within A4249_RS11260at 2268.053 kb on - strand, within A4249_RS11260at 2268.053 kb on - strand, within A4249_RS11260at 2268.053 kb on - strand, within A4249_RS11260at 2268.197 kb on + strand, within A4249_RS11260at 2268.197 kb on + strand, within A4249_RS11260at 2268.197 kb on + strand, within A4249_RS11260at 2268.197 kb on + strand, within A4249_RS11260at 2268.197 kb on + strand, within A4249_RS11260at 2268.198 kb on - strand, within A4249_RS11260at 2268.198 kb on - strand, within A4249_RS11260at 2268.198 kb on - strand, within A4249_RS11260at 2268.198 kb on - strand, within A4249_RS11260at 2268.198 kb on - strand, within A4249_RS11260at 2268.198 kb on - strand, within A4249_RS11260at 2268.198 kb on - strand, within A4249_RS11260at 2268.198 kb on - strand, within A4249_RS11260at 2268.198 kb on - strand, within A4249_RS11260at 2268.206 kb on + strand, within A4249_RS11260at 2268.206 kb on + strand, within A4249_RS11260at 2268.207 kb on - strand, within A4249_RS11260at 2268.207 kb on - strand, within A4249_RS11260at 2268.207 kb on - strand, within A4249_RS11260at 2268.207 kb on - strand, within A4249_RS11260at 2268.207 kb on - strand, within A4249_RS11260at 2268.207 kb on - strand, within A4249_RS11260at 2268.207 kb on - strand, within A4249_RS11260at 2268.207 kb on - strand, within A4249_RS11260at 2268.207 kb on - strand, within A4249_RS11260at 2268.208 kb on + strand, within A4249_RS11260at 2268.208 kb on + strand, within A4249_RS11260at 2268.208 kb on + strand, within A4249_RS11260at 2268.208 kb on + strand, within A4249_RS11260at 2268.209 kb on - strand, within A4249_RS11260at 2268.209 kb on - strand, within A4249_RS11260at 2268.209 kb on - strand, within A4249_RS11260at 2268.209 kb on - strand, within A4249_RS11260at 2268.209 kb on - strand, within A4249_RS11260at 2268.217 kb on + strand, within A4249_RS11260at 2268.395 kb on - strand, within A4249_RS11260at 2268.407 kb on + strand, within A4249_RS11260at 2268.408 kb on - strand, within A4249_RS11260at 2268.408 kb on - strand, within A4249_RS11260at 2268.409 kb on + strand, within A4249_RS11260at 2268.409 kb on + strand, within A4249_RS11260at 2268.410 kb on - strand, within A4249_RS11260at 2268.410 kb on - strand, within A4249_RS11260at 2268.410 kb on - strand, within A4249_RS11260at 2268.430 kb on + strand, within A4249_RS11260at 2268.430 kb on + strand, within A4249_RS11260at 2268.431 kb on - strand, within A4249_RS11260at 2268.431 kb on - strand, within A4249_RS11260at 2268.431 kb on - strand, within A4249_RS11260at 2268.431 kb on - strand, within A4249_RS11260at 2268.478 kb on + strand, within A4249_RS11260at 2268.478 kb on + strand, within A4249_RS11260at 2268.478 kb on + strand, within A4249_RS11260at 2268.478 kb on + strand, within A4249_RS11260at 2268.478 kb on + strand, within A4249_RS11260at 2268.478 kb on + strand, within A4249_RS11260at 2268.478 kb on + strand, within A4249_RS11260at 2268.478 kb on + strand, within A4249_RS11260at 2268.479 kb on - strand, within A4249_RS11260at 2268.691 kb on + strand, within A4249_RS11260at 2268.691 kb on + strand, within A4249_RS11260at 2268.691 kb on + strand, within A4249_RS11260at 2268.691 kb on + strand, within A4249_RS11260at 2268.692 kb on - strand, within A4249_RS11260at 2268.692 kb on - strand, within A4249_RS11260at 2268.692 kb on - strand, within A4249_RS11260at 2268.692 kb on - strand, within A4249_RS11260at 2268.718 kb on + strand, within A4249_RS11260at 2268.719 kb on - strand, within A4249_RS11260at 2269.073 kb on + strand, within A4249_RS11260at 2269.073 kb on + strand, within A4249_RS11260at 2269.073 kb on + strand, within A4249_RS11260at 2269.074 kb on - strand, within A4249_RS11260at 2269.074 kb on - strand, within A4249_RS11260at 2269.117 kb on + strand, within A4249_RS11260at 2269.266 kb on - strand, within A4249_RS11260at 2269.306 kb on + strand, within A4249_RS11260at 2269.306 kb on + strand, within A4249_RS11260at 2269.307 kb on - strand, within A4249_RS11260at 2269.307 kb on - strand, within A4249_RS11260at 2269.307 kb on - strand, within A4249_RS11260at 2269.528 kb on + strand, within A4249_RS11260at 2269.528 kb on + strand, within A4249_RS11260at 2269.528 kb on + strand, within A4249_RS11260at 2269.528 kb on + strand, within A4249_RS11260at 2269.528 kb on + strand, within A4249_RS11260at 2269.529 kb on - strand, within A4249_RS11260at 2269.529 kb on - strand, within A4249_RS11260at 2269.529 kb on - strand, within A4249_RS11260at 2269.529 kb on - strand, within A4249_RS11260at 2269.529 kb on - strand, within A4249_RS11260at 2269.529 kb on - strand, within A4249_RS11260at 2269.529 kb on - strand, within A4249_RS11260at 2269.529 kb on - strand, within A4249_RS11260at 2269.529 kb on - strand, within A4249_RS11260at 2269.529 kb on - strand, within A4249_RS11260at 2269.592 kb on + strand, within A4249_RS11260at 2269.592 kb on + strand, within A4249_RS11260at 2269.593 kb on - strand, within A4249_RS11260at 2269.687 kb on + strand, within A4249_RS11260at 2269.687 kb on + strand, within A4249_RS11260at 2269.811 kb on + strandat 2269.889 kb on + strandat 2269.889 kb on + strandat 2269.889 kb on + strandat 2269.930 kb on + strandat 2269.930 kb on + strandat 2269.931 kb on - strandat 2269.931 kb on - strandat 2270.131 kb on + strand, within A4249_RS11265at 2270.131 kb on + strand, within A4249_RS11265at 2270.131 kb on + strand, within A4249_RS11265at 2270.146 kb on + strand, within A4249_RS11265at 2270.209 kb on + strand, within A4249_RS11265at 2270.209 kb on + strand, within A4249_RS11265at 2270.209 kb on + strand, within A4249_RS11265at 2270.210 kb on - strand, within A4249_RS11265at 2270.366 kb on - strand, within A4249_RS11265at 2270.595 kb on + strand, within A4249_RS11265at 2270.596 kb on - strand, within A4249_RS11265at 2270.596 kb on - strand, within A4249_RS11265at 2270.604 kb on + strand, within A4249_RS11265at 2270.604 kb on + strand, within A4249_RS11265at 2270.605 kb on - strand, within A4249_RS11265at 2270.605 kb on - strand, within A4249_RS11265at 2270.605 kb on - strand, within A4249_RS11265at 2270.608 kb on + strand, within A4249_RS11265at 2270.608 kb on + strand, within A4249_RS11265at 2270.608 kb on + strand, within A4249_RS11265at 2270.608 kb on + strand, within A4249_RS11265at 2270.608 kb on + strand, within A4249_RS11265at 2270.609 kb on - strand, within A4249_RS11265at 2270.609 kb on - strand, within A4249_RS11265at 2270.609 kb on - strand, within A4249_RS11265

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,267,022 - A4249_RS11255 0.66 +0.0
2,267,155 + A4249_RS11255 0.73 +0.2
2,267,155 + A4249_RS11255 0.73 +0.8
2,267,155 + A4249_RS11255 0.73 -1.6
2,267,155 + A4249_RS11255 0.73 +0.6
2,267,155 + A4249_RS11255 0.73 +0.2
2,267,155 + A4249_RS11255 0.73 -1.3
2,267,155 + A4249_RS11255 0.73 -1.0
2,267,155 + A4249_RS11255 0.73 -0.7
2,267,156 - A4249_RS11255 0.73 -0.4
2,267,233 + A4249_RS11255 0.76 -0.0
2,267,383 + A4249_RS11255 0.84 +0.1
2,267,383 + A4249_RS11255 0.84 +0.9
2,267,384 - A4249_RS11255 0.84 -0.7
2,267,475 + A4249_RS11255 0.88 +1.1
2,267,475 + A4249_RS11255 0.88 +0.1
2,267,476 - A4249_RS11255 0.88 -0.6
2,267,534 - -0.0
2,267,542 + +0.1
2,267,542 + +0.0
2,267,542 + +0.2
2,267,543 - -1.2
2,267,543 - -0.2
2,267,543 - -0.2
2,267,543 - -1.1
2,267,543 - -0.7
2,267,543 - -0.4
2,267,543 - +0.3
2,267,602 + +0.7
2,267,602 + +0.3
2,267,602 + -0.1
2,267,602 + -0.0
2,267,602 + -0.6
2,267,602 + +0.2
2,267,602 + +0.9
2,267,602 + -0.8
2,267,602 + -0.6
2,267,603 - +0.3
2,267,603 - -0.9
2,267,603 - -0.0
2,267,767 + -0.2
2,267,768 - -0.7
2,267,768 - +0.2
2,267,768 - -0.0
2,267,768 - -0.5
2,267,816 + +0.2
2,267,817 - +0.8
2,267,817 - -0.9
2,267,817 - -0.6
2,267,819 - -1.5
2,268,028 + A4249_RS11260 0.11 -0.7
2,268,029 - A4249_RS11260 0.11 -0.5
2,268,029 - A4249_RS11260 0.11 +0.4
2,268,029 - A4249_RS11260 0.11 -0.9
2,268,052 + A4249_RS11260 0.12 -0.4
2,268,052 + A4249_RS11260 0.12 +1.7
2,268,052 + A4249_RS11260 0.12 -0.4
2,268,053 - A4249_RS11260 0.12 +0.2
2,268,053 - A4249_RS11260 0.12 +0.3
2,268,053 - A4249_RS11260 0.12 -1.0
2,268,053 - A4249_RS11260 0.12 -0.5
2,268,053 - A4249_RS11260 0.12 +1.3
2,268,053 - A4249_RS11260 0.12 +0.3
2,268,053 - A4249_RS11260 0.12 +0.0
2,268,053 - A4249_RS11260 0.12 +0.6
2,268,197 + A4249_RS11260 0.19 +1.0
2,268,197 + A4249_RS11260 0.19 -0.3
2,268,197 + A4249_RS11260 0.19 -0.4
2,268,197 + A4249_RS11260 0.19 +0.7
2,268,197 + A4249_RS11260 0.19 -2.2
2,268,198 - A4249_RS11260 0.19 -0.0
2,268,198 - A4249_RS11260 0.19 -0.5
2,268,198 - A4249_RS11260 0.19 -0.6
2,268,198 - A4249_RS11260 0.19 -1.0
2,268,198 - A4249_RS11260 0.19 +1.7
2,268,198 - A4249_RS11260 0.19 +0.0
2,268,198 - A4249_RS11260 0.19 -0.4
2,268,198 - A4249_RS11260 0.19 -0.3
2,268,198 - A4249_RS11260 0.19 -0.0
2,268,206 + A4249_RS11260 0.19 -0.4
2,268,206 + A4249_RS11260 0.19 +0.1
2,268,207 - A4249_RS11260 0.19 -0.1
2,268,207 - A4249_RS11260 0.19 +0.4
2,268,207 - A4249_RS11260 0.19 -0.1
2,268,207 - A4249_RS11260 0.19 +1.0
2,268,207 - A4249_RS11260 0.19 -0.8
2,268,207 - A4249_RS11260 0.19 +0.0
2,268,207 - A4249_RS11260 0.19 -0.1
2,268,207 - A4249_RS11260 0.19 +0.6
2,268,207 - A4249_RS11260 0.19 +0.9
2,268,208 + A4249_RS11260 0.19 -1.4
2,268,208 + A4249_RS11260 0.19 -0.7
2,268,208 + A4249_RS11260 0.19 -0.3
2,268,208 + A4249_RS11260 0.19 +0.1
2,268,209 - A4249_RS11260 0.20 +0.6
2,268,209 - A4249_RS11260 0.20 -1.7
2,268,209 - A4249_RS11260 0.20 -0.6
2,268,209 - A4249_RS11260 0.20 +0.4
2,268,209 - A4249_RS11260 0.20 -0.3
2,268,217 + A4249_RS11260 0.20 +0.9
2,268,395 - A4249_RS11260 0.28 +1.2
2,268,407 + A4249_RS11260 0.29 -0.3
2,268,408 - A4249_RS11260 0.29 -0.2
2,268,408 - A4249_RS11260 0.29 -1.3
2,268,409 + A4249_RS11260 0.29 +0.4
2,268,409 + A4249_RS11260 0.29 +0.1
2,268,410 - A4249_RS11260 0.29 -0.6
2,268,410 - A4249_RS11260 0.29 -1.1
2,268,410 - A4249_RS11260 0.29 -1.2
2,268,430 + A4249_RS11260 0.30 -0.5
2,268,430 + A4249_RS11260 0.30 -0.4
2,268,431 - A4249_RS11260 0.30 -0.1
2,268,431 - A4249_RS11260 0.30 -0.9
2,268,431 - A4249_RS11260 0.30 +1.2
2,268,431 - A4249_RS11260 0.30 -0.8
2,268,478 + A4249_RS11260 0.32 +0.2
2,268,478 + A4249_RS11260 0.32 -0.2
2,268,478 + A4249_RS11260 0.32 -0.5
2,268,478 + A4249_RS11260 0.32 +0.4
2,268,478 + A4249_RS11260 0.32 +0.9
2,268,478 + A4249_RS11260 0.32 -0.5
2,268,478 + A4249_RS11260 0.32 +0.6
2,268,478 + A4249_RS11260 0.32 +0.5
2,268,479 - A4249_RS11260 0.32 -0.1
2,268,691 + A4249_RS11260 0.42 -0.3
2,268,691 + A4249_RS11260 0.42 +0.1
2,268,691 + A4249_RS11260 0.42 +1.2
2,268,691 + A4249_RS11260 0.42 +0.9
2,268,692 - A4249_RS11260 0.43 +1.7
2,268,692 - A4249_RS11260 0.43 -0.8
2,268,692 - A4249_RS11260 0.43 -0.9
2,268,692 - A4249_RS11260 0.43 +0.4
2,268,718 + A4249_RS11260 0.44 +1.0
2,268,719 - A4249_RS11260 0.44 +0.2
2,269,073 + A4249_RS11260 0.61 +0.0
2,269,073 + A4249_RS11260 0.61 -0.1
2,269,073 + A4249_RS11260 0.61 -0.1
2,269,074 - A4249_RS11260 0.61 -0.2
2,269,074 - A4249_RS11260 0.61 -0.8
2,269,117 + A4249_RS11260 0.63 +0.2
2,269,266 - A4249_RS11260 0.70 -0.1
2,269,306 + A4249_RS11260 0.72 +0.3
2,269,306 + A4249_RS11260 0.72 +0.1
2,269,307 - A4249_RS11260 0.72 +0.8
2,269,307 - A4249_RS11260 0.72 -0.7
2,269,307 - A4249_RS11260 0.72 -0.2
2,269,528 + A4249_RS11260 0.82 -0.5
2,269,528 + A4249_RS11260 0.82 -0.5
2,269,528 + A4249_RS11260 0.82 -0.1
2,269,528 + A4249_RS11260 0.82 -0.3
2,269,528 + A4249_RS11260 0.82 -1.0
2,269,529 - A4249_RS11260 0.82 +0.2
2,269,529 - A4249_RS11260 0.82 -0.2
2,269,529 - A4249_RS11260 0.82 +0.7
2,269,529 - A4249_RS11260 0.82 +0.2
2,269,529 - A4249_RS11260 0.82 -0.6
2,269,529 - A4249_RS11260 0.82 -0.3
2,269,529 - A4249_RS11260 0.82 +0.7
2,269,529 - A4249_RS11260 0.82 -0.2
2,269,529 - A4249_RS11260 0.82 -0.1
2,269,529 - A4249_RS11260 0.82 +0.3
2,269,592 + A4249_RS11260 0.85 -0.3
2,269,592 + A4249_RS11260 0.85 +0.6
2,269,593 - A4249_RS11260 0.85 +0.8
2,269,687 + A4249_RS11260 0.90 -0.1
2,269,687 + A4249_RS11260 0.90 +0.1
2,269,811 + +0.1
2,269,889 + -0.8
2,269,889 + +0.6
2,269,889 + -0.9
2,269,930 + +0.3
2,269,930 + +0.2
2,269,931 - -0.6
2,269,931 - +0.1
2,270,131 + A4249_RS11265 0.14 +0.7
2,270,131 + A4249_RS11265 0.14 -1.1
2,270,131 + A4249_RS11265 0.14 -0.3
2,270,146 + A4249_RS11265 0.15 +0.7
2,270,209 + A4249_RS11265 0.23 +0.1
2,270,209 + A4249_RS11265 0.23 +0.4
2,270,209 + A4249_RS11265 0.23 -1.2
2,270,210 - A4249_RS11265 0.23 +0.5
2,270,366 - A4249_RS11265 0.41 +0.1
2,270,595 + A4249_RS11265 0.68 +0.3
2,270,596 - A4249_RS11265 0.68 +0.0
2,270,596 - A4249_RS11265 0.68 +0.6
2,270,604 + A4249_RS11265 0.69 -0.2
2,270,604 + A4249_RS11265 0.69 +0.4
2,270,605 - A4249_RS11265 0.69 +0.0
2,270,605 - A4249_RS11265 0.69 +0.8
2,270,605 - A4249_RS11265 0.69 -0.0
2,270,608 + A4249_RS11265 0.69 +0.0
2,270,608 + A4249_RS11265 0.69 +0.3
2,270,608 + A4249_RS11265 0.69 +0.5
2,270,608 + A4249_RS11265 0.69 -0.4
2,270,608 + A4249_RS11265 0.69 +1.0
2,270,609 - A4249_RS11265 0.70 +0.6
2,270,609 - A4249_RS11265 0.70 +1.1
2,270,609 - A4249_RS11265 0.70 +0.5

Or see this region's nucleotide sequence