Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11145 and A4249_RS11150 are separated by 167 nucleotides A4249_RS11150 and A4249_RS11155 are separated by 519 nucleotides
A4249_RS11145: A4249_RS11145 - TonB-dependent receptor, at 2,242,656 to 2,245,967
_RS11145
A4249_RS11150: A4249_RS11150 - capsular biosynthesis protein, at 2,246,135 to 2,247,265
_RS11150
A4249_RS11155: A4249_RS11155 - outer membrane beta-barrel protein, at 2,247,785 to 2,248,939
_RS11155
Position (kb)
2246
2247
2248 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2245.153 kb on + strand, within A4249_RS11145 at 2245.153 kb on + strand, within A4249_RS11145 at 2245.154 kb on - strand, within A4249_RS11145 at 2245.195 kb on + strand, within A4249_RS11145 at 2245.195 kb on + strand, within A4249_RS11145 at 2245.283 kb on - strand, within A4249_RS11145 at 2245.662 kb on - strand at 2245.726 kb on + strand at 2245.727 kb on - strand at 2245.858 kb on + strand at 2245.859 kb on - strand at 2245.859 kb on - strand at 2245.859 kb on - strand at 2245.859 kb on - strand at 2245.859 kb on - strand at 2245.859 kb on - strand at 2245.897 kb on + strand at 2245.898 kb on - strand at 2245.968 kb on + strand at 2245.968 kb on + strand at 2245.968 kb on + strand at 2245.968 kb on + strand at 2245.969 kb on - strand at 2245.969 kb on - strand at 2245.973 kb on + strand at 2245.974 kb on - strand at 2246.058 kb on + strand at 2246.058 kb on + strand at 2246.058 kb on + strand at 2246.058 kb on + strand at 2246.070 kb on + strand at 2246.070 kb on + strand at 2246.070 kb on + strand at 2246.071 kb on - strand at 2246.071 kb on - strand at 2246.071 kb on - strand at 2246.071 kb on - strand at 2246.071 kb on - strand at 2246.071 kb on - strand at 2246.083 kb on + strand at 2246.083 kb on + strand at 2246.084 kb on - strand at 2246.084 kb on - strand at 2246.122 kb on + strand at 2246.122 kb on + strand at 2246.123 kb on - strand at 2246.136 kb on + strand at 2246.137 kb on - strand at 2246.137 kb on - strand at 2246.137 kb on - strand at 2246.205 kb on + strand at 2246.205 kb on + strand at 2246.205 kb on + strand at 2246.206 kb on - strand at 2246.206 kb on - strand at 2246.206 kb on - strand at 2246.206 kb on - strand at 2246.632 kb on - strand, within A4249_RS11150 at 2246.641 kb on - strand, within A4249_RS11150 at 2246.641 kb on - strand, within A4249_RS11150 at 2246.705 kb on + strand, within A4249_RS11150 at 2246.706 kb on - strand, within A4249_RS11150 at 2246.754 kb on + strand, within A4249_RS11150 at 2246.754 kb on + strand, within A4249_RS11150 at 2246.754 kb on + strand, within A4249_RS11150 at 2246.754 kb on + strand, within A4249_RS11150 at 2246.755 kb on - strand, within A4249_RS11150 at 2246.800 kb on - strand, within A4249_RS11150 at 2246.811 kb on + strand, within A4249_RS11150 at 2246.811 kb on + strand, within A4249_RS11150 at 2246.811 kb on + strand, within A4249_RS11150 at 2246.812 kb on - strand, within A4249_RS11150 at 2246.812 kb on - strand, within A4249_RS11150 at 2246.848 kb on + strand, within A4249_RS11150 at 2246.849 kb on - strand, within A4249_RS11150 at 2246.849 kb on - strand, within A4249_RS11150 at 2246.849 kb on - strand, within A4249_RS11150 at 2246.849 kb on - strand, within A4249_RS11150 at 2246.853 kb on + strand, within A4249_RS11150 at 2246.854 kb on - strand, within A4249_RS11150 at 2246.854 kb on - strand, within A4249_RS11150 at 2246.863 kb on + strand, within A4249_RS11150 at 2246.864 kb on - strand, within A4249_RS11150 at 2246.899 kb on + strand, within A4249_RS11150 at 2246.912 kb on + strand, within A4249_RS11150 at 2246.913 kb on - strand, within A4249_RS11150 at 2247.012 kb on + strand, within A4249_RS11150 at 2247.013 kb on - strand, within A4249_RS11150 at 2247.013 kb on - strand, within A4249_RS11150 at 2247.013 kb on - strand, within A4249_RS11150 at 2247.078 kb on + strand, within A4249_RS11150 at 2247.078 kb on + strand, within A4249_RS11150 at 2247.078 kb on + strand, within A4249_RS11150 at 2247.079 kb on - strand, within A4249_RS11150 at 2247.441 kb on + strand at 2247.441 kb on - strand at 2247.442 kb on - strand at 2247.510 kb on + strand at 2247.567 kb on + strand at 2247.568 kb on - strand at 2247.667 kb on + strand at 2247.667 kb on + strand at 2247.668 kb on - strand at 2247.668 kb on - strand at 2247.668 kb on - strand at 2247.668 kb on - strand at 2247.668 kb on - strand at 2247.668 kb on - strand at 2247.668 kb on - strand at 2247.668 kb on - strand at 2247.720 kb on + strand at 2247.721 kb on - strand at 2247.787 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 2,245,153 + A4249_RS11145 0.75 +0.9 2,245,153 + A4249_RS11145 0.75 +1.6 2,245,154 - A4249_RS11145 0.75 +0.4 2,245,195 + A4249_RS11145 0.77 +1.0 2,245,195 + A4249_RS11145 0.77 +1.4 2,245,283 - A4249_RS11145 0.79 -1.9 2,245,662 - -0.1 2,245,726 + -0.0 2,245,727 - -0.6 2,245,858 + -0.3 2,245,859 - -0.1 2,245,859 - +1.7 2,245,859 - +0.7 2,245,859 - +1.1 2,245,859 - +0.8 2,245,859 - -0.9 2,245,897 + +0.1 2,245,898 - +0.1 2,245,968 + +0.3 2,245,968 + +1.7 2,245,968 + +0.4 2,245,968 + +1.7 2,245,969 - -1.5 2,245,969 - +0.4 2,245,973 + -0.0 2,245,974 - +0.5 2,246,058 + +0.6 2,246,058 + +0.9 2,246,058 + -0.3 2,246,058 + +1.1 2,246,070 + -0.5 2,246,070 + +1.3 2,246,070 + +2.1 2,246,071 - +0.0 2,246,071 - -0.7 2,246,071 - +0.5 2,246,071 - -0.2 2,246,071 - -0.4 2,246,071 - -0.5 2,246,083 + +0.5 2,246,083 + -1.0 2,246,084 - -0.3 2,246,084 - -0.0 2,246,122 + -0.0 2,246,122 + -0.2 2,246,123 - +0.4 2,246,136 + -0.2 2,246,137 - -1.0 2,246,137 - -0.4 2,246,137 - -1.5 2,246,205 + -0.8 2,246,205 + -1.5 2,246,205 + +0.4 2,246,206 - +2.1 2,246,206 - -1.9 2,246,206 - +0.5 2,246,206 - -0.3 2,246,632 - A4249_RS11150 0.44 -0.6 2,246,641 - A4249_RS11150 0.45 -1.7 2,246,641 - A4249_RS11150 0.45 +0.3 2,246,705 + A4249_RS11150 0.50 +0.4 2,246,706 - A4249_RS11150 0.50 -1.3 2,246,754 + A4249_RS11150 0.55 -1.3 2,246,754 + A4249_RS11150 0.55 -0.1 2,246,754 + A4249_RS11150 0.55 -0.3 2,246,754 + A4249_RS11150 0.55 -0.2 2,246,755 - A4249_RS11150 0.55 +0.1 2,246,800 - A4249_RS11150 0.59 -0.5 2,246,811 + A4249_RS11150 0.60 -0.3 2,246,811 + A4249_RS11150 0.60 +0.3 2,246,811 + A4249_RS11150 0.60 -2.6 2,246,812 - A4249_RS11150 0.60 -1.2 2,246,812 - A4249_RS11150 0.60 -0.0 2,246,848 + A4249_RS11150 0.63 +0.1 2,246,849 - A4249_RS11150 0.63 -0.4 2,246,849 - A4249_RS11150 0.63 -1.4 2,246,849 - A4249_RS11150 0.63 -1.6 2,246,849 - A4249_RS11150 0.63 -0.8 2,246,853 + A4249_RS11150 0.63 -1.9 2,246,854 - A4249_RS11150 0.64 -0.5 2,246,854 - A4249_RS11150 0.64 -0.5 2,246,863 + A4249_RS11150 0.64 -0.5 2,246,864 - A4249_RS11150 0.64 -0.2 2,246,899 + A4249_RS11150 0.68 -0.9 2,246,912 + A4249_RS11150 0.69 -0.8 2,246,913 - A4249_RS11150 0.69 -1.1 2,247,012 + A4249_RS11150 0.78 -0.3 2,247,013 - A4249_RS11150 0.78 -1.1 2,247,013 - A4249_RS11150 0.78 +0.7 2,247,013 - A4249_RS11150 0.78 -1.4 2,247,078 + A4249_RS11150 0.83 -0.6 2,247,078 + A4249_RS11150 0.83 -0.2 2,247,078 + A4249_RS11150 0.83 -2.1 2,247,079 - A4249_RS11150 0.83 -0.7 2,247,441 + +0.2 2,247,441 - -1.2 2,247,442 - -1.8 2,247,510 + -0.7 2,247,567 + +1.0 2,247,568 - +0.1 2,247,667 + +0.3 2,247,667 + -0.3 2,247,668 - -0.5 2,247,668 - +0.2 2,247,668 - -0.9 2,247,668 - -0.3 2,247,668 - +0.1 2,247,668 - -0.6 2,247,668 - +0.4 2,247,668 - -1.0 2,247,720 + -1.5 2,247,721 - +0.6 2,247,787 - -0.9
Or see this region's nucleotide sequence