Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11150

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11145 and A4249_RS11150 are separated by 167 nucleotidesA4249_RS11150 and A4249_RS11155 are separated by 519 nucleotides A4249_RS11145: A4249_RS11145 - TonB-dependent receptor, at 2,242,656 to 2,245,967 _RS11145 A4249_RS11150: A4249_RS11150 - capsular biosynthesis protein, at 2,246,135 to 2,247,265 _RS11150 A4249_RS11155: A4249_RS11155 - outer membrane beta-barrel protein, at 2,247,785 to 2,248,939 _RS11155 Position (kb) 2246 2247 2248Strain fitness (log2 ratio) -2 -1 0 1 2at 2245.153 kb on + strand, within A4249_RS11145at 2245.153 kb on + strand, within A4249_RS11145at 2245.154 kb on - strand, within A4249_RS11145at 2245.195 kb on + strand, within A4249_RS11145at 2245.195 kb on + strand, within A4249_RS11145at 2245.283 kb on - strand, within A4249_RS11145at 2245.662 kb on - strandat 2245.726 kb on + strandat 2245.727 kb on - strandat 2245.858 kb on + strandat 2245.859 kb on - strandat 2245.859 kb on - strandat 2245.859 kb on - strandat 2245.859 kb on - strandat 2245.859 kb on - strandat 2245.859 kb on - strandat 2245.897 kb on + strandat 2245.898 kb on - strandat 2245.968 kb on + strandat 2245.968 kb on + strandat 2245.968 kb on + strandat 2245.968 kb on + strandat 2245.969 kb on - strandat 2245.969 kb on - strandat 2245.973 kb on + strandat 2245.974 kb on - strandat 2246.058 kb on + strandat 2246.058 kb on + strandat 2246.058 kb on + strandat 2246.058 kb on + strandat 2246.070 kb on + strandat 2246.070 kb on + strandat 2246.070 kb on + strandat 2246.071 kb on - strandat 2246.071 kb on - strandat 2246.071 kb on - strandat 2246.071 kb on - strandat 2246.071 kb on - strandat 2246.071 kb on - strandat 2246.083 kb on + strandat 2246.083 kb on + strandat 2246.084 kb on - strandat 2246.084 kb on - strandat 2246.122 kb on + strandat 2246.122 kb on + strandat 2246.123 kb on - strandat 2246.136 kb on + strandat 2246.137 kb on - strandat 2246.137 kb on - strandat 2246.137 kb on - strandat 2246.205 kb on + strandat 2246.205 kb on + strandat 2246.205 kb on + strandat 2246.206 kb on - strandat 2246.206 kb on - strandat 2246.206 kb on - strandat 2246.206 kb on - strandat 2246.632 kb on - strand, within A4249_RS11150at 2246.641 kb on - strand, within A4249_RS11150at 2246.641 kb on - strand, within A4249_RS11150at 2246.705 kb on + strand, within A4249_RS11150at 2246.706 kb on - strand, within A4249_RS11150at 2246.754 kb on + strand, within A4249_RS11150at 2246.754 kb on + strand, within A4249_RS11150at 2246.754 kb on + strand, within A4249_RS11150at 2246.754 kb on + strand, within A4249_RS11150at 2246.755 kb on - strand, within A4249_RS11150at 2246.800 kb on - strand, within A4249_RS11150at 2246.811 kb on + strand, within A4249_RS11150at 2246.811 kb on + strand, within A4249_RS11150at 2246.811 kb on + strand, within A4249_RS11150at 2246.812 kb on - strand, within A4249_RS11150at 2246.812 kb on - strand, within A4249_RS11150at 2246.848 kb on + strand, within A4249_RS11150at 2246.849 kb on - strand, within A4249_RS11150at 2246.849 kb on - strand, within A4249_RS11150at 2246.849 kb on - strand, within A4249_RS11150at 2246.849 kb on - strand, within A4249_RS11150at 2246.853 kb on + strand, within A4249_RS11150at 2246.854 kb on - strand, within A4249_RS11150at 2246.854 kb on - strand, within A4249_RS11150at 2246.863 kb on + strand, within A4249_RS11150at 2246.864 kb on - strand, within A4249_RS11150at 2246.899 kb on + strand, within A4249_RS11150at 2246.912 kb on + strand, within A4249_RS11150at 2246.913 kb on - strand, within A4249_RS11150at 2247.012 kb on + strand, within A4249_RS11150at 2247.013 kb on - strand, within A4249_RS11150at 2247.013 kb on - strand, within A4249_RS11150at 2247.013 kb on - strand, within A4249_RS11150at 2247.078 kb on + strand, within A4249_RS11150at 2247.078 kb on + strand, within A4249_RS11150at 2247.078 kb on + strand, within A4249_RS11150at 2247.079 kb on - strand, within A4249_RS11150at 2247.441 kb on + strandat 2247.441 kb on - strandat 2247.442 kb on - strandat 2247.510 kb on + strandat 2247.567 kb on + strandat 2247.568 kb on - strandat 2247.667 kb on + strandat 2247.667 kb on + strandat 2247.668 kb on - strandat 2247.668 kb on - strandat 2247.668 kb on - strandat 2247.668 kb on - strandat 2247.668 kb on - strandat 2247.668 kb on - strandat 2247.668 kb on - strandat 2247.668 kb on - strandat 2247.720 kb on + strandat 2247.721 kb on - strandat 2247.787 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,245,153 + A4249_RS11145 0.75 +0.9
2,245,153 + A4249_RS11145 0.75 +1.6
2,245,154 - A4249_RS11145 0.75 +0.4
2,245,195 + A4249_RS11145 0.77 +1.0
2,245,195 + A4249_RS11145 0.77 +1.4
2,245,283 - A4249_RS11145 0.79 -1.9
2,245,662 - -0.1
2,245,726 + -0.0
2,245,727 - -0.6
2,245,858 + -0.3
2,245,859 - -0.1
2,245,859 - +1.7
2,245,859 - +0.7
2,245,859 - +1.1
2,245,859 - +0.8
2,245,859 - -0.9
2,245,897 + +0.1
2,245,898 - +0.1
2,245,968 + +0.3
2,245,968 + +1.7
2,245,968 + +0.4
2,245,968 + +1.7
2,245,969 - -1.5
2,245,969 - +0.4
2,245,973 + -0.0
2,245,974 - +0.5
2,246,058 + +0.6
2,246,058 + +0.9
2,246,058 + -0.3
2,246,058 + +1.1
2,246,070 + -0.5
2,246,070 + +1.3
2,246,070 + +2.1
2,246,071 - +0.0
2,246,071 - -0.7
2,246,071 - +0.5
2,246,071 - -0.2
2,246,071 - -0.4
2,246,071 - -0.5
2,246,083 + +0.5
2,246,083 + -1.0
2,246,084 - -0.3
2,246,084 - -0.0
2,246,122 + -0.0
2,246,122 + -0.2
2,246,123 - +0.4
2,246,136 + -0.2
2,246,137 - -1.0
2,246,137 - -0.4
2,246,137 - -1.5
2,246,205 + -0.8
2,246,205 + -1.5
2,246,205 + +0.4
2,246,206 - +2.1
2,246,206 - -1.9
2,246,206 - +0.5
2,246,206 - -0.3
2,246,632 - A4249_RS11150 0.44 -0.6
2,246,641 - A4249_RS11150 0.45 -1.7
2,246,641 - A4249_RS11150 0.45 +0.3
2,246,705 + A4249_RS11150 0.50 +0.4
2,246,706 - A4249_RS11150 0.50 -1.3
2,246,754 + A4249_RS11150 0.55 -1.3
2,246,754 + A4249_RS11150 0.55 -0.1
2,246,754 + A4249_RS11150 0.55 -0.3
2,246,754 + A4249_RS11150 0.55 -0.2
2,246,755 - A4249_RS11150 0.55 +0.1
2,246,800 - A4249_RS11150 0.59 -0.5
2,246,811 + A4249_RS11150 0.60 -0.3
2,246,811 + A4249_RS11150 0.60 +0.3
2,246,811 + A4249_RS11150 0.60 -2.6
2,246,812 - A4249_RS11150 0.60 -1.2
2,246,812 - A4249_RS11150 0.60 -0.0
2,246,848 + A4249_RS11150 0.63 +0.1
2,246,849 - A4249_RS11150 0.63 -0.4
2,246,849 - A4249_RS11150 0.63 -1.4
2,246,849 - A4249_RS11150 0.63 -1.6
2,246,849 - A4249_RS11150 0.63 -0.8
2,246,853 + A4249_RS11150 0.63 -1.9
2,246,854 - A4249_RS11150 0.64 -0.5
2,246,854 - A4249_RS11150 0.64 -0.5
2,246,863 + A4249_RS11150 0.64 -0.5
2,246,864 - A4249_RS11150 0.64 -0.2
2,246,899 + A4249_RS11150 0.68 -0.9
2,246,912 + A4249_RS11150 0.69 -0.8
2,246,913 - A4249_RS11150 0.69 -1.1
2,247,012 + A4249_RS11150 0.78 -0.3
2,247,013 - A4249_RS11150 0.78 -1.1
2,247,013 - A4249_RS11150 0.78 +0.7
2,247,013 - A4249_RS11150 0.78 -1.4
2,247,078 + A4249_RS11150 0.83 -0.6
2,247,078 + A4249_RS11150 0.83 -0.2
2,247,078 + A4249_RS11150 0.83 -2.1
2,247,079 - A4249_RS11150 0.83 -0.7
2,247,441 + +0.2
2,247,441 - -1.2
2,247,442 - -1.8
2,247,510 + -0.7
2,247,567 + +1.0
2,247,568 - +0.1
2,247,667 + +0.3
2,247,667 + -0.3
2,247,668 - -0.5
2,247,668 - +0.2
2,247,668 - -0.9
2,247,668 - -0.3
2,247,668 - +0.1
2,247,668 - -0.6
2,247,668 - +0.4
2,247,668 - -1.0
2,247,720 + -1.5
2,247,721 - +0.6
2,247,787 - -0.9

Or see this region's nucleotide sequence