Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10505

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10495 and A4249_RS10500 are separated by 16 nucleotidesA4249_RS10500 and A4249_RS10505 are separated by 3 nucleotidesA4249_RS10505 and A4249_RS10510 are separated by 71 nucleotides A4249_RS10495: A4249_RS10495 - DUF2170 family protein, at 2,110,896 to 2,111,576 _RS10495 A4249_RS10500: A4249_RS10500 - PspA/IM30 family protein, at 2,111,593 to 2,112,333 _RS10500 A4249_RS10505: A4249_RS10505 - glutathionylspermidine synthase family protein, at 2,112,337 to 2,113,503 _RS10505 A4249_RS10510: A4249_RS10510 - hypothetical protein, at 2,113,575 to 2,114,453 _RS10510 Position (kb) 2112 2113 2114Strain fitness (log2 ratio) -2 -1 0 1 2at 2111.448 kb on + strand, within A4249_RS10495at 2111.448 kb on + strand, within A4249_RS10495at 2111.448 kb on + strand, within A4249_RS10495at 2111.448 kb on + strand, within A4249_RS10495at 2111.448 kb on + strand, within A4249_RS10495at 2111.449 kb on - strand, within A4249_RS10495at 2111.449 kb on - strand, within A4249_RS10495at 2111.449 kb on - strand, within A4249_RS10495at 2111.449 kb on - strand, within A4249_RS10495at 2111.449 kb on - strand, within A4249_RS10495at 2111.449 kb on - strand, within A4249_RS10495at 2111.449 kb on - strand, within A4249_RS10495at 2111.449 kb on - strand, within A4249_RS10495at 2111.809 kb on + strand, within A4249_RS10500at 2111.809 kb on + strand, within A4249_RS10500at 2111.809 kb on + strand, within A4249_RS10500at 2111.809 kb on + strand, within A4249_RS10500at 2111.810 kb on - strand, within A4249_RS10500at 2111.810 kb on - strand, within A4249_RS10500at 2111.810 kb on - strand, within A4249_RS10500at 2111.810 kb on - strand, within A4249_RS10500at 2112.449 kb on - strandat 2112.449 kb on - strandat 2112.449 kb on - strandat 2112.449 kb on - strandat 2112.570 kb on + strand, within A4249_RS10505at 2112.571 kb on - strand, within A4249_RS10505at 2112.571 kb on - strand, within A4249_RS10505at 2112.592 kb on + strand, within A4249_RS10505at 2112.592 kb on + strand, within A4249_RS10505at 2112.592 kb on + strand, within A4249_RS10505at 2112.593 kb on - strand, within A4249_RS10505at 2112.593 kb on - strand, within A4249_RS10505at 2112.593 kb on - strand, within A4249_RS10505at 2112.593 kb on - strand, within A4249_RS10505at 2112.593 kb on - strand, within A4249_RS10505at 2112.593 kb on - strand, within A4249_RS10505at 2112.593 kb on - strand, within A4249_RS10505at 2112.631 kb on + strand, within A4249_RS10505at 2112.631 kb on + strand, within A4249_RS10505at 2112.632 kb on - strand, within A4249_RS10505at 2112.632 kb on - strand, within A4249_RS10505at 2112.632 kb on - strand, within A4249_RS10505at 2112.632 kb on - strand, within A4249_RS10505at 2112.632 kb on - strand, within A4249_RS10505at 2112.652 kb on + strand, within A4249_RS10505at 2112.652 kb on + strand, within A4249_RS10505at 2112.652 kb on + strand, within A4249_RS10505at 2112.652 kb on + strand, within A4249_RS10505at 2112.653 kb on - strand, within A4249_RS10505at 2112.679 kb on + strand, within A4249_RS10505at 2112.679 kb on + strand, within A4249_RS10505at 2112.679 kb on + strand, within A4249_RS10505at 2112.679 kb on + strand, within A4249_RS10505at 2112.680 kb on - strand, within A4249_RS10505at 2112.680 kb on - strand, within A4249_RS10505at 2112.680 kb on - strand, within A4249_RS10505at 2112.685 kb on + strand, within A4249_RS10505at 2112.685 kb on + strand, within A4249_RS10505at 2112.685 kb on + strand, within A4249_RS10505at 2112.685 kb on + strand, within A4249_RS10505at 2112.685 kb on + strand, within A4249_RS10505at 2112.685 kb on + strand, within A4249_RS10505at 2112.686 kb on - strand, within A4249_RS10505at 2112.686 kb on - strand, within A4249_RS10505at 2112.686 kb on - strand, within A4249_RS10505at 2112.686 kb on - strand, within A4249_RS10505at 2112.686 kb on - strand, within A4249_RS10505at 2112.686 kb on - strand, within A4249_RS10505at 2112.686 kb on - strand, within A4249_RS10505at 2112.686 kb on - strand, within A4249_RS10505at 2112.686 kb on - strand, within A4249_RS10505at 2112.712 kb on + strand, within A4249_RS10505at 2112.712 kb on + strand, within A4249_RS10505at 2112.713 kb on - strand, within A4249_RS10505at 2112.713 kb on - strand, within A4249_RS10505at 2112.713 kb on - strand, within A4249_RS10505at 2112.713 kb on - strand, within A4249_RS10505at 2112.713 kb on - strand, within A4249_RS10505at 2112.713 kb on - strand, within A4249_RS10505at 2112.713 kb on - strand, within A4249_RS10505at 2113.034 kb on - strand, within A4249_RS10505at 2113.034 kb on - strand, within A4249_RS10505at 2113.034 kb on - strand, within A4249_RS10505at 2113.063 kb on + strand, within A4249_RS10505at 2113.063 kb on + strand, within A4249_RS10505at 2113.064 kb on - strand, within A4249_RS10505at 2113.064 kb on - strand, within A4249_RS10505at 2113.139 kb on + strand, within A4249_RS10505at 2113.139 kb on + strand, within A4249_RS10505at 2113.139 kb on + strand, within A4249_RS10505at 2113.139 kb on + strand, within A4249_RS10505at 2113.139 kb on + strand, within A4249_RS10505at 2113.139 kb on + strand, within A4249_RS10505at 2113.140 kb on - strand, within A4249_RS10505at 2113.140 kb on - strand, within A4249_RS10505at 2113.140 kb on - strand, within A4249_RS10505at 2113.181 kb on + strand, within A4249_RS10505at 2113.181 kb on + strand, within A4249_RS10505at 2113.181 kb on + strand, within A4249_RS10505at 2113.182 kb on - strand, within A4249_RS10505at 2113.182 kb on - strand, within A4249_RS10505at 2113.192 kb on + strand, within A4249_RS10505at 2113.193 kb on - strand, within A4249_RS10505at 2113.234 kb on + strand, within A4249_RS10505at 2113.234 kb on + strand, within A4249_RS10505at 2113.234 kb on + strand, within A4249_RS10505at 2113.234 kb on + strand, within A4249_RS10505at 2113.234 kb on + strand, within A4249_RS10505at 2113.234 kb on + strand, within A4249_RS10505at 2113.235 kb on - strand, within A4249_RS10505at 2113.235 kb on - strand, within A4249_RS10505at 2113.235 kb on - strand, within A4249_RS10505at 2113.235 kb on - strand, within A4249_RS10505at 2113.235 kb on - strand, within A4249_RS10505at 2113.235 kb on - strand, within A4249_RS10505at 2113.235 kb on - strand, within A4249_RS10505at 2113.235 kb on - strand, within A4249_RS10505at 2113.235 kb on - strand, within A4249_RS10505at 2113.235 kb on - strand, within A4249_RS10505at 2113.235 kb on - strand, within A4249_RS10505at 2113.235 kb on - strand, within A4249_RS10505at 2113.235 kb on - strand, within A4249_RS10505at 2113.447 kb on - strandat 2113.653 kb on + strandat 2113.653 kb on + strandat 2113.653 kb on + strandat 2113.654 kb on - strandat 2113.857 kb on + strand, within A4249_RS10510at 2113.858 kb on - strand, within A4249_RS10510at 2113.887 kb on + strand, within A4249_RS10510at 2113.888 kb on - strand, within A4249_RS10510at 2113.888 kb on - strand, within A4249_RS10510at 2113.938 kb on + strand, within A4249_RS10510at 2114.094 kb on + strand, within A4249_RS10510at 2114.095 kb on - strand, within A4249_RS10510at 2114.095 kb on - strand, within A4249_RS10510at 2114.124 kb on + strand, within A4249_RS10510at 2114.125 kb on - strand, within A4249_RS10510at 2114.370 kb on + strandat 2114.371 kb on - strandat 2114.406 kb on + strandat 2114.451 kb on + strandat 2114.452 kb on - strandat 2114.502 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,111,448 + A4249_RS10495 0.81 +0.6
2,111,448 + A4249_RS10495 0.81 +0.3
2,111,448 + A4249_RS10495 0.81 +0.4
2,111,448 + A4249_RS10495 0.81 +0.4
2,111,448 + A4249_RS10495 0.81 -0.2
2,111,449 - A4249_RS10495 0.81 +0.5
2,111,449 - A4249_RS10495 0.81 -0.2
2,111,449 - A4249_RS10495 0.81 -0.6
2,111,449 - A4249_RS10495 0.81 +1.9
2,111,449 - A4249_RS10495 0.81 +1.0
2,111,449 - A4249_RS10495 0.81 +1.7
2,111,449 - A4249_RS10495 0.81 -0.5
2,111,449 - A4249_RS10495 0.81 -0.8
2,111,809 + A4249_RS10500 0.29 +0.4
2,111,809 + A4249_RS10500 0.29 -0.3
2,111,809 + A4249_RS10500 0.29 -1.0
2,111,809 + A4249_RS10500 0.29 -0.7
2,111,810 - A4249_RS10500 0.29 -1.4
2,111,810 - A4249_RS10500 0.29 +0.4
2,111,810 - A4249_RS10500 0.29 +0.5
2,111,810 - A4249_RS10500 0.29 -1.3
2,112,449 - +0.5
2,112,449 - +2.4
2,112,449 - +0.6
2,112,449 - +0.2
2,112,570 + A4249_RS10505 0.20 +1.1
2,112,571 - A4249_RS10505 0.20 -0.7
2,112,571 - A4249_RS10505 0.20 +0.6
2,112,592 + A4249_RS10505 0.22 -0.4
2,112,592 + A4249_RS10505 0.22 -0.7
2,112,592 + A4249_RS10505 0.22 +0.6
2,112,593 - A4249_RS10505 0.22 -0.0
2,112,593 - A4249_RS10505 0.22 -0.0
2,112,593 - A4249_RS10505 0.22 -1.0
2,112,593 - A4249_RS10505 0.22 -0.2
2,112,593 - A4249_RS10505 0.22 -0.0
2,112,593 - A4249_RS10505 0.22 -0.3
2,112,593 - A4249_RS10505 0.22 -0.2
2,112,631 + A4249_RS10505 0.25 -2.1
2,112,631 + A4249_RS10505 0.25 +1.0
2,112,632 - A4249_RS10505 0.25 +1.0
2,112,632 - A4249_RS10505 0.25 -1.3
2,112,632 - A4249_RS10505 0.25 -0.2
2,112,632 - A4249_RS10505 0.25 -1.1
2,112,632 - A4249_RS10505 0.25 -0.0
2,112,652 + A4249_RS10505 0.27 -0.7
2,112,652 + A4249_RS10505 0.27 -0.4
2,112,652 + A4249_RS10505 0.27 +1.0
2,112,652 + A4249_RS10505 0.27 +0.4
2,112,653 - A4249_RS10505 0.27 +0.4
2,112,679 + A4249_RS10505 0.29 +0.1
2,112,679 + A4249_RS10505 0.29 +1.5
2,112,679 + A4249_RS10505 0.29 +1.1
2,112,679 + A4249_RS10505 0.29 +0.1
2,112,680 - A4249_RS10505 0.29 +1.0
2,112,680 - A4249_RS10505 0.29 +0.3
2,112,680 - A4249_RS10505 0.29 +1.2
2,112,685 + A4249_RS10505 0.30 +0.5
2,112,685 + A4249_RS10505 0.30 +0.7
2,112,685 + A4249_RS10505 0.30 +0.2
2,112,685 + A4249_RS10505 0.30 +0.1
2,112,685 + A4249_RS10505 0.30 -0.1
2,112,685 + A4249_RS10505 0.30 -0.0
2,112,686 - A4249_RS10505 0.30 +0.5
2,112,686 - A4249_RS10505 0.30 -0.6
2,112,686 - A4249_RS10505 0.30 -0.1
2,112,686 - A4249_RS10505 0.30 -0.5
2,112,686 - A4249_RS10505 0.30 -0.8
2,112,686 - A4249_RS10505 0.30 +0.6
2,112,686 - A4249_RS10505 0.30 +1.2
2,112,686 - A4249_RS10505 0.30 +0.1
2,112,686 - A4249_RS10505 0.30 +0.1
2,112,712 + A4249_RS10505 0.32 -0.6
2,112,712 + A4249_RS10505 0.32 -1.0
2,112,713 - A4249_RS10505 0.32 +0.2
2,112,713 - A4249_RS10505 0.32 -1.2
2,112,713 - A4249_RS10505 0.32 -0.4
2,112,713 - A4249_RS10505 0.32 +1.8
2,112,713 - A4249_RS10505 0.32 +0.4
2,112,713 - A4249_RS10505 0.32 +1.0
2,112,713 - A4249_RS10505 0.32 -0.6
2,113,034 - A4249_RS10505 0.60 +0.5
2,113,034 - A4249_RS10505 0.60 -1.3
2,113,034 - A4249_RS10505 0.60 -0.8
2,113,063 + A4249_RS10505 0.62 +0.4
2,113,063 + A4249_RS10505 0.62 +0.7
2,113,064 - A4249_RS10505 0.62 +0.4
2,113,064 - A4249_RS10505 0.62 +0.1
2,113,139 + A4249_RS10505 0.69 +0.1
2,113,139 + A4249_RS10505 0.69 -0.5
2,113,139 + A4249_RS10505 0.69 -0.7
2,113,139 + A4249_RS10505 0.69 -0.7
2,113,139 + A4249_RS10505 0.69 -1.0
2,113,139 + A4249_RS10505 0.69 -2.4
2,113,140 - A4249_RS10505 0.69 +0.1
2,113,140 - A4249_RS10505 0.69 +0.9
2,113,140 - A4249_RS10505 0.69 +0.4
2,113,181 + A4249_RS10505 0.72 -1.3
2,113,181 + A4249_RS10505 0.72 -0.3
2,113,181 + A4249_RS10505 0.72 +0.3
2,113,182 - A4249_RS10505 0.72 +2.5
2,113,182 - A4249_RS10505 0.72 +0.1
2,113,192 + A4249_RS10505 0.73 +0.3
2,113,193 - A4249_RS10505 0.73 +0.1
2,113,234 + A4249_RS10505 0.77 +0.9
2,113,234 + A4249_RS10505 0.77 +0.6
2,113,234 + A4249_RS10505 0.77 -0.8
2,113,234 + A4249_RS10505 0.77 -0.3
2,113,234 + A4249_RS10505 0.77 -1.8
2,113,234 + A4249_RS10505 0.77 +0.8
2,113,235 - A4249_RS10505 0.77 -0.4
2,113,235 - A4249_RS10505 0.77 -0.6
2,113,235 - A4249_RS10505 0.77 +1.5
2,113,235 - A4249_RS10505 0.77 +0.1
2,113,235 - A4249_RS10505 0.77 +0.3
2,113,235 - A4249_RS10505 0.77 +1.0
2,113,235 - A4249_RS10505 0.77 -0.2
2,113,235 - A4249_RS10505 0.77 -0.6
2,113,235 - A4249_RS10505 0.77 -1.7
2,113,235 - A4249_RS10505 0.77 +0.9
2,113,235 - A4249_RS10505 0.77 +0.5
2,113,235 - A4249_RS10505 0.77 +1.0
2,113,235 - A4249_RS10505 0.77 +1.1
2,113,447 - -0.8
2,113,653 + -1.9
2,113,653 + +0.4
2,113,653 + +1.1
2,113,654 - -1.8
2,113,857 + A4249_RS10510 0.32 +1.4
2,113,858 - A4249_RS10510 0.32 -0.6
2,113,887 + A4249_RS10510 0.35 -1.5
2,113,888 - A4249_RS10510 0.36 -1.0
2,113,888 - A4249_RS10510 0.36 +0.4
2,113,938 + A4249_RS10510 0.41 -0.0
2,114,094 + A4249_RS10510 0.59 -0.4
2,114,095 - A4249_RS10510 0.59 -1.9
2,114,095 - A4249_RS10510 0.59 -0.5
2,114,124 + A4249_RS10510 0.62 +0.5
2,114,125 - A4249_RS10510 0.63 +0.4
2,114,370 + -0.5
2,114,371 - -0.5
2,114,406 + +1.1
2,114,451 + -1.0
2,114,452 - -0.7
2,114,502 + +0.4

Or see this region's nucleotide sequence