Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10455

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10445 and A4249_RS10450 are separated by 61 nucleotidesA4249_RS10450 and A4249_RS10455 are separated by 77 nucleotidesA4249_RS10455 and A4249_RS10460 are separated by 90 nucleotides A4249_RS10445: A4249_RS10445 - von Willebrand factor type A domain-containing protein, at 2,100,403 to 2,102,244 _RS10445 A4249_RS10450: A4249_RS10450 - CBS domain-containing protein, at 2,102,306 to 2,102,713 _RS10450 A4249_RS10455: A4249_RS10455 - hypothetical protein, at 2,102,791 to 2,103,360 _RS10455 A4249_RS10460: A4249_RS10460 - ATP-binding protein, at 2,103,451 to 2,105,835 _RS10460 Position (kb) 2102 2103 2104Strain fitness (log2 ratio) -2 -1 0 1 2at 2101.841 kb on - strand, within A4249_RS10445at 2101.888 kb on + strand, within A4249_RS10445at 2101.944 kb on + strand, within A4249_RS10445at 2101.957 kb on + strand, within A4249_RS10445at 2101.957 kb on + strand, within A4249_RS10445at 2101.957 kb on + strand, within A4249_RS10445at 2101.958 kb on - strand, within A4249_RS10445at 2101.958 kb on - strand, within A4249_RS10445at 2102.119 kb on + strandat 2102.119 kb on + strandat 2102.174 kb on - strandat 2102.678 kb on + strandat 2102.678 kb on + strandat 2102.678 kb on + strandat 2102.678 kb on + strandat 2102.678 kb on + strandat 2102.678 kb on + strandat 2102.679 kb on - strandat 2102.914 kb on + strand, within A4249_RS10455at 2102.914 kb on + strand, within A4249_RS10455at 2102.914 kb on + strand, within A4249_RS10455at 2102.914 kb on + strand, within A4249_RS10455at 2102.914 kb on + strand, within A4249_RS10455at 2102.914 kb on + strand, within A4249_RS10455at 2102.914 kb on + strand, within A4249_RS10455at 2102.914 kb on + strand, within A4249_RS10455at 2102.914 kb on + strand, within A4249_RS10455at 2102.914 kb on + strand, within A4249_RS10455at 2102.914 kb on + strand, within A4249_RS10455at 2102.914 kb on + strand, within A4249_RS10455at 2102.914 kb on + strand, within A4249_RS10455at 2102.914 kb on + strand, within A4249_RS10455at 2102.915 kb on - strand, within A4249_RS10455at 2102.915 kb on - strand, within A4249_RS10455at 2102.915 kb on - strand, within A4249_RS10455at 2102.915 kb on - strand, within A4249_RS10455at 2102.915 kb on - strand, within A4249_RS10455at 2102.915 kb on - strand, within A4249_RS10455at 2102.915 kb on - strand, within A4249_RS10455at 2102.915 kb on - strand, within A4249_RS10455at 2102.915 kb on - strand, within A4249_RS10455at 2102.915 kb on - strand, within A4249_RS10455at 2102.915 kb on - strand, within A4249_RS10455at 2102.915 kb on - strand, within A4249_RS10455at 2102.915 kb on - strand, within A4249_RS10455at 2102.915 kb on - strand, within A4249_RS10455at 2102.993 kb on + strand, within A4249_RS10455at 2102.994 kb on - strand, within A4249_RS10455at 2102.994 kb on - strand, within A4249_RS10455at 2103.073 kb on + strand, within A4249_RS10455at 2103.073 kb on + strand, within A4249_RS10455at 2103.073 kb on + strand, within A4249_RS10455at 2103.134 kb on - strand, within A4249_RS10455at 2103.134 kb on - strand, within A4249_RS10455at 2103.134 kb on - strand, within A4249_RS10455at 2103.359 kb on - strandat 2103.412 kb on + strandat 2103.568 kb on + strandat 2103.569 kb on - strandat 2103.569 kb on - strandat 2103.569 kb on - strandat 2104.108 kb on + strand, within A4249_RS10460at 2104.108 kb on + strand, within A4249_RS10460at 2104.108 kb on + strand, within A4249_RS10460at 2104.108 kb on + strand, within A4249_RS10460at 2104.109 kb on - strand, within A4249_RS10460at 2104.109 kb on - strand, within A4249_RS10460at 2104.109 kb on - strand, within A4249_RS10460at 2104.216 kb on + strand, within A4249_RS10460at 2104.216 kb on + strand, within A4249_RS10460at 2104.216 kb on + strand, within A4249_RS10460at 2104.217 kb on - strand, within A4249_RS10460at 2104.217 kb on - strand, within A4249_RS10460at 2104.319 kb on + strand, within A4249_RS10460at 2104.319 kb on + strand, within A4249_RS10460at 2104.319 kb on + strand, within A4249_RS10460at 2104.319 kb on + strand, within A4249_RS10460at 2104.320 kb on - strand, within A4249_RS10460at 2104.320 kb on - strand, within A4249_RS10460at 2104.320 kb on - strand, within A4249_RS10460at 2104.320 kb on - strand, within A4249_RS10460at 2104.320 kb on - strand, within A4249_RS10460at 2104.348 kb on + strand, within A4249_RS10460at 2104.348 kb on + strand, within A4249_RS10460at 2104.348 kb on + strand, within A4249_RS10460at 2104.348 kb on + strand, within A4249_RS10460at 2104.348 kb on + strand, within A4249_RS10460at 2104.348 kb on + strand, within A4249_RS10460at 2104.348 kb on + strand, within A4249_RS10460at 2104.348 kb on + strand, within A4249_RS10460at 2104.348 kb on + strand, within A4249_RS10460at 2104.349 kb on - strand, within A4249_RS10460at 2104.349 kb on - strand, within A4249_RS10460at 2104.349 kb on - strand, within A4249_RS10460at 2104.349 kb on - strand, within A4249_RS10460at 2104.349 kb on - strand, within A4249_RS10460at 2104.349 kb on - strand, within A4249_RS10460at 2104.349 kb on - strand, within A4249_RS10460at 2104.349 kb on - strand, within A4249_RS10460at 2104.349 kb on - strand, within A4249_RS10460at 2104.349 kb on - strand, within A4249_RS10460at 2104.350 kb on + strand, within A4249_RS10460at 2104.350 kb on + strand, within A4249_RS10460at 2104.351 kb on - strand, within A4249_RS10460at 2104.351 kb on - strand, within A4249_RS10460at 2104.351 kb on - strand, within A4249_RS10460at 2104.351 kb on - strand, within A4249_RS10460at 2104.351 kb on - strand, within A4249_RS10460at 2104.351 kb on - strand, within A4249_RS10460

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,101,841 - A4249_RS10445 0.78 +0.6
2,101,888 + A4249_RS10445 0.81 -0.2
2,101,944 + A4249_RS10445 0.84 -1.4
2,101,957 + A4249_RS10445 0.84 -1.5
2,101,957 + A4249_RS10445 0.84 -0.9
2,101,957 + A4249_RS10445 0.84 -2.0
2,101,958 - A4249_RS10445 0.84 +0.6
2,101,958 - A4249_RS10445 0.84 +0.6
2,102,119 + +0.2
2,102,119 + +1.2
2,102,174 - -2.1
2,102,678 + +0.3
2,102,678 + -0.5
2,102,678 + -0.3
2,102,678 + -0.2
2,102,678 + +1.0
2,102,678 + +1.9
2,102,679 - -0.9
2,102,914 + A4249_RS10455 0.22 +0.1
2,102,914 + A4249_RS10455 0.22 +0.5
2,102,914 + A4249_RS10455 0.22 +0.1
2,102,914 + A4249_RS10455 0.22 -0.0
2,102,914 + A4249_RS10455 0.22 +0.3
2,102,914 + A4249_RS10455 0.22 -0.2
2,102,914 + A4249_RS10455 0.22 -1.1
2,102,914 + A4249_RS10455 0.22 -0.4
2,102,914 + A4249_RS10455 0.22 +1.2
2,102,914 + A4249_RS10455 0.22 -0.4
2,102,914 + A4249_RS10455 0.22 +1.2
2,102,914 + A4249_RS10455 0.22 -0.6
2,102,914 + A4249_RS10455 0.22 -0.7
2,102,914 + A4249_RS10455 0.22 +1.5
2,102,915 - A4249_RS10455 0.22 +0.1
2,102,915 - A4249_RS10455 0.22 +1.2
2,102,915 - A4249_RS10455 0.22 -1.0
2,102,915 - A4249_RS10455 0.22 +0.2
2,102,915 - A4249_RS10455 0.22 -0.5
2,102,915 - A4249_RS10455 0.22 -0.3
2,102,915 - A4249_RS10455 0.22 +0.5
2,102,915 - A4249_RS10455 0.22 +0.6
2,102,915 - A4249_RS10455 0.22 +0.6
2,102,915 - A4249_RS10455 0.22 +0.2
2,102,915 - A4249_RS10455 0.22 -1.5
2,102,915 - A4249_RS10455 0.22 -0.4
2,102,915 - A4249_RS10455 0.22 +0.2
2,102,915 - A4249_RS10455 0.22 +0.6
2,102,993 + A4249_RS10455 0.35 -0.7
2,102,994 - A4249_RS10455 0.36 -1.8
2,102,994 - A4249_RS10455 0.36 -0.5
2,103,073 + A4249_RS10455 0.49 -0.4
2,103,073 + A4249_RS10455 0.49 +0.3
2,103,073 + A4249_RS10455 0.49 -0.2
2,103,134 - A4249_RS10455 0.60 +0.4
2,103,134 - A4249_RS10455 0.60 -0.2
2,103,134 - A4249_RS10455 0.60 -0.2
2,103,359 - -0.4
2,103,412 + -0.7
2,103,568 + -1.1
2,103,569 - -1.4
2,103,569 - -0.3
2,103,569 - -1.6
2,104,108 + A4249_RS10460 0.28 -0.7
2,104,108 + A4249_RS10460 0.28 +1.7
2,104,108 + A4249_RS10460 0.28 +0.6
2,104,108 + A4249_RS10460 0.28 -0.4
2,104,109 - A4249_RS10460 0.28 -0.5
2,104,109 - A4249_RS10460 0.28 -0.9
2,104,109 - A4249_RS10460 0.28 -0.0
2,104,216 + A4249_RS10460 0.32 -0.6
2,104,216 + A4249_RS10460 0.32 -1.0
2,104,216 + A4249_RS10460 0.32 -0.9
2,104,217 - A4249_RS10460 0.32 -2.4
2,104,217 - A4249_RS10460 0.32 +0.1
2,104,319 + A4249_RS10460 0.36 -0.4
2,104,319 + A4249_RS10460 0.36 +0.1
2,104,319 + A4249_RS10460 0.36 -1.0
2,104,319 + A4249_RS10460 0.36 -0.9
2,104,320 - A4249_RS10460 0.36 -0.9
2,104,320 - A4249_RS10460 0.36 +1.0
2,104,320 - A4249_RS10460 0.36 -1.0
2,104,320 - A4249_RS10460 0.36 -0.3
2,104,320 - A4249_RS10460 0.36 -0.6
2,104,348 + A4249_RS10460 0.38 -0.6
2,104,348 + A4249_RS10460 0.38 -0.4
2,104,348 + A4249_RS10460 0.38 -1.5
2,104,348 + A4249_RS10460 0.38 -0.4
2,104,348 + A4249_RS10460 0.38 -1.4
2,104,348 + A4249_RS10460 0.38 -0.1
2,104,348 + A4249_RS10460 0.38 +0.1
2,104,348 + A4249_RS10460 0.38 +0.2
2,104,348 + A4249_RS10460 0.38 +1.1
2,104,349 - A4249_RS10460 0.38 +0.0
2,104,349 - A4249_RS10460 0.38 -0.1
2,104,349 - A4249_RS10460 0.38 -0.9
2,104,349 - A4249_RS10460 0.38 -0.0
2,104,349 - A4249_RS10460 0.38 -0.7
2,104,349 - A4249_RS10460 0.38 -0.3
2,104,349 - A4249_RS10460 0.38 +0.1
2,104,349 - A4249_RS10460 0.38 -0.1
2,104,349 - A4249_RS10460 0.38 -0.2
2,104,349 - A4249_RS10460 0.38 -1.0
2,104,350 + A4249_RS10460 0.38 -0.5
2,104,350 + A4249_RS10460 0.38 -0.0
2,104,351 - A4249_RS10460 0.38 -1.8
2,104,351 - A4249_RS10460 0.38 -1.9
2,104,351 - A4249_RS10460 0.38 -0.5
2,104,351 - A4249_RS10460 0.38 -0.8
2,104,351 - A4249_RS10460 0.38 +0.2
2,104,351 - A4249_RS10460 0.38 -0.3

Or see this region's nucleotide sequence