Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10360 and A4249_RS10365 are separated by 79 nucleotides A4249_RS10365 and A4249_RS10370 overlap by 4 nucleotides A4249_RS10370 and A4249_RS10375 are separated by 55 nucleotides A4249_RS10375 and A4249_RS10380 are separated by 84 nucleotides
A4249_RS10360: A4249_RS10360 - HAMP domain-containing sensor histidine kinase, at 2,078,080 to 2,079,789
_RS10360
A4249_RS10365: A4249_RS10365 - hypothetical protein, at 2,079,869 to 2,080,132
_RS10365
A4249_RS10370: A4249_RS10370 - hypothetical protein, at 2,080,129 to 2,080,989
_RS10370
A4249_RS10375: A4249_RS10375 - DUF1491 family protein, at 2,081,045 to 2,081,374
_RS10375
A4249_RS10380: A4249_RS10380 - DUF3883 domain-containing protein, at 2,081,459 to 2,082,403
_RS10380
Position (kb)
2080
2081 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2079.167 kb on - strand, within A4249_RS10360 at 2079.794 kb on + strand at 2079.794 kb on + strand at 2079.795 kb on - strand at 2079.795 kb on - strand at 2079.795 kb on - strand at 2079.828 kb on - strand at 2079.828 kb on - strand at 2079.828 kb on - strand at 2079.828 kb on - strand at 2079.835 kb on + strand at 2079.835 kb on + strand at 2079.835 kb on + strand at 2079.835 kb on + strand at 2079.835 kb on + strand at 2079.835 kb on + strand at 2079.836 kb on - strand at 2079.836 kb on - strand at 2079.836 kb on - strand at 2079.836 kb on - strand at 2079.836 kb on - strand at 2079.836 kb on - strand at 2079.868 kb on + strand at 2079.869 kb on - strand at 2080.050 kb on + strand, within A4249_RS10365 at 2080.051 kb on - strand, within A4249_RS10365 at 2080.051 kb on - strand, within A4249_RS10365 at 2080.130 kb on + strand at 2080.130 kb on + strand at 2080.130 kb on + strand at 2080.131 kb on - strand at 2080.131 kb on - strand at 2080.330 kb on - strand, within A4249_RS10370 at 2080.583 kb on + strand, within A4249_RS10370 at 2080.583 kb on + strand, within A4249_RS10370 at 2080.583 kb on + strand, within A4249_RS10370 at 2080.583 kb on + strand, within A4249_RS10370 at 2080.584 kb on - strand, within A4249_RS10370 at 2080.802 kb on + strand, within A4249_RS10370 at 2080.803 kb on - strand, within A4249_RS10370 at 2080.886 kb on + strand, within A4249_RS10370 at 2080.887 kb on - strand, within A4249_RS10370 at 2080.982 kb on - strand at 2080.982 kb on - strand at 2081.108 kb on + strand, within A4249_RS10375 at 2081.108 kb on + strand, within A4249_RS10375 at 2081.108 kb on + strand, within A4249_RS10375 at 2081.109 kb on - strand, within A4249_RS10375 at 2081.165 kb on + strand, within A4249_RS10375 at 2081.166 kb on - strand, within A4249_RS10375 at 2081.166 kb on - strand, within A4249_RS10375 at 2081.166 kb on - strand, within A4249_RS10375 at 2081.276 kb on + strand, within A4249_RS10375 at 2081.276 kb on + strand, within A4249_RS10375 at 2081.276 kb on + strand, within A4249_RS10375 at 2081.276 kb on + strand, within A4249_RS10375 at 2081.276 kb on + strand, within A4249_RS10375 at 2081.276 kb on + strand, within A4249_RS10375 at 2081.276 kb on + strand, within A4249_RS10375 at 2081.277 kb on - strand, within A4249_RS10375 at 2081.277 kb on - strand, within A4249_RS10375 at 2081.277 kb on - strand, within A4249_RS10375 at 2081.277 kb on - strand, within A4249_RS10375 at 2081.277 kb on - strand, within A4249_RS10375 at 2081.277 kb on - strand, within A4249_RS10375 at 2081.277 kb on - strand, within A4249_RS10375 at 2081.277 kb on - strand, within A4249_RS10375 at 2081.277 kb on - strand, within A4249_RS10375 at 2081.277 kb on - strand, within A4249_RS10375 at 2081.297 kb on + strand, within A4249_RS10375 at 2081.297 kb on + strand, within A4249_RS10375 at 2081.372 kb on + strand at 2081.372 kb on + strand at 2081.372 kb on + strand at 2081.372 kb on + strand at 2081.372 kb on + strand at 2081.372 kb on + strand at 2081.373 kb on - strand at 2081.373 kb on - strand at 2081.373 kb on - strand at 2081.373 kb on - strand at 2081.373 kb on - strand at 2081.373 kb on - strand at 2081.413 kb on + strand at 2081.413 kb on + strand at 2081.413 kb on + strand at 2081.414 kb on - strand at 2081.414 kb on - strand at 2081.414 kb on - strand at 2081.435 kb on + strand at 2081.435 kb on + strand at 2081.436 kb on - strand at 2081.525 kb on + strand at 2081.526 kb on - strand at 2081.526 kb on - strand at 2081.708 kb on + strand, within A4249_RS10380 at 2081.708 kb on + strand, within A4249_RS10380 at 2081.709 kb on - strand, within A4249_RS10380 at 2081.745 kb on + strand, within A4249_RS10380 at 2081.745 kb on + strand, within A4249_RS10380 at 2081.746 kb on - strand, within A4249_RS10380 at 2081.766 kb on + strand, within A4249_RS10380 at 2081.766 kb on + strand, within A4249_RS10380 at 2081.767 kb on - strand, within A4249_RS10380 at 2081.767 kb on - strand, within A4249_RS10380
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 2,079,167 - A4249_RS10360 0.64 +0.5 2,079,794 + -0.0 2,079,794 + -0.3 2,079,795 - -0.3 2,079,795 - +0.0 2,079,795 - +0.2 2,079,828 - +0.0 2,079,828 - +0.5 2,079,828 - -0.9 2,079,828 - -0.1 2,079,835 + -1.5 2,079,835 + -0.5 2,079,835 + +0.2 2,079,835 + -0.1 2,079,835 + -1.4 2,079,835 + -0.3 2,079,836 - +0.4 2,079,836 - -0.0 2,079,836 - +0.1 2,079,836 - -0.5 2,079,836 - -0.2 2,079,836 - +0.3 2,079,868 + +0.5 2,079,869 - -1.5 2,080,050 + A4249_RS10365 0.69 -0.0 2,080,051 - A4249_RS10365 0.69 +1.0 2,080,051 - A4249_RS10365 0.69 +0.2 2,080,130 + -0.6 2,080,130 + -0.6 2,080,130 + -0.5 2,080,131 - -0.5 2,080,131 - +0.1 2,080,330 - A4249_RS10370 0.23 +0.1 2,080,583 + A4249_RS10370 0.53 -0.4 2,080,583 + A4249_RS10370 0.53 +0.2 2,080,583 + A4249_RS10370 0.53 +0.1 2,080,583 + A4249_RS10370 0.53 +0.4 2,080,584 - A4249_RS10370 0.53 -0.3 2,080,802 + A4249_RS10370 0.78 +1.2 2,080,803 - A4249_RS10370 0.78 -0.2 2,080,886 + A4249_RS10370 0.88 -0.7 2,080,887 - A4249_RS10370 0.88 -0.9 2,080,982 - -0.1 2,080,982 - +0.2 2,081,108 + A4249_RS10375 0.19 -0.8 2,081,108 + A4249_RS10375 0.19 +0.6 2,081,108 + A4249_RS10375 0.19 +1.4 2,081,109 - A4249_RS10375 0.19 +0.7 2,081,165 + A4249_RS10375 0.36 -0.4 2,081,166 - A4249_RS10375 0.37 +2.3 2,081,166 - A4249_RS10375 0.37 +0.1 2,081,166 - A4249_RS10375 0.37 -0.0 2,081,276 + A4249_RS10375 0.70 -0.3 2,081,276 + A4249_RS10375 0.70 +0.8 2,081,276 + A4249_RS10375 0.70 +0.6 2,081,276 + A4249_RS10375 0.70 -0.4 2,081,276 + A4249_RS10375 0.70 -0.4 2,081,276 + A4249_RS10375 0.70 +2.1 2,081,276 + A4249_RS10375 0.70 -1.0 2,081,277 - A4249_RS10375 0.70 +0.8 2,081,277 - A4249_RS10375 0.70 -0.2 2,081,277 - A4249_RS10375 0.70 -0.9 2,081,277 - A4249_RS10375 0.70 +1.4 2,081,277 - A4249_RS10375 0.70 +0.7 2,081,277 - A4249_RS10375 0.70 +1.3 2,081,277 - A4249_RS10375 0.70 +0.5 2,081,277 - A4249_RS10375 0.70 -0.7 2,081,277 - A4249_RS10375 0.70 -0.5 2,081,277 - A4249_RS10375 0.70 +0.4 2,081,297 + A4249_RS10375 0.76 +0.1 2,081,297 + A4249_RS10375 0.76 -0.3 2,081,372 + +0.6 2,081,372 + -0.8 2,081,372 + -0.3 2,081,372 + +0.3 2,081,372 + -0.4 2,081,372 + -1.2 2,081,373 - -0.1 2,081,373 - +0.3 2,081,373 - -1.5 2,081,373 - -0.7 2,081,373 - +0.3 2,081,373 - -1.0 2,081,413 + +1.2 2,081,413 + +0.1 2,081,413 + +0.6 2,081,414 - -0.8 2,081,414 - -0.5 2,081,414 - -1.5 2,081,435 + +0.1 2,081,435 + -2.0 2,081,436 - +0.5 2,081,525 + -1.7 2,081,526 - +1.2 2,081,526 - -1.5 2,081,708 + A4249_RS10380 0.26 +0.6 2,081,708 + A4249_RS10380 0.26 -0.4 2,081,709 - A4249_RS10380 0.26 -0.0 2,081,745 + A4249_RS10380 0.30 +1.1 2,081,745 + A4249_RS10380 0.30 -0.1 2,081,746 - A4249_RS10380 0.30 -0.1 2,081,766 + A4249_RS10380 0.32 -1.8 2,081,766 + A4249_RS10380 0.32 -0.0 2,081,767 - A4249_RS10380 0.33 -0.0 2,081,767 - A4249_RS10380 0.33 -0.1
Or see this region's nucleotide sequence