Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS08410 and A4249_RS08415 are separated by 62 nucleotides A4249_RS08415 and A4249_RS08420 overlap by 4 nucleotides A4249_RS08420 and A4249_RS08425 are separated by 2 nucleotides
A4249_RS08410: A4249_RS08410 - D-alanyl-D-alanine carboxypeptidase family protein, at 1,687,471 to 1,688,961
_RS08410
A4249_RS08415: A4249_RS08415 - PA0069 family radical SAM protein, at 1,689,024 to 1,690,088
_RS08415
A4249_RS08420: A4249_RS08420 - hypothetical protein, at 1,690,085 to 1,690,480
_RS08420
A4249_RS08425: A4249_RS08425 - class I SAM-dependent RNA methyltransferase, at 1,690,483 to 1,691,727
_RS08425
Position (kb) 1689
1690
1691 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 1688.053 kb on + strand, within A4249_RS08410 at 1688.054 kb on - strand, within A4249_RS08410 at 1688.054 kb on - strand, within A4249_RS08410 at 1688.056 kb on + strand, within A4249_RS08410 at 1688.056 kb on + strand, within A4249_RS08410 at 1688.056 kb on + strand, within A4249_RS08410 at 1688.057 kb on - strand, within A4249_RS08410 at 1688.063 kb on - strand, within A4249_RS08410 at 1688.140 kb on + strand, within A4249_RS08410 at 1688.161 kb on + strand, within A4249_RS08410 at 1688.179 kb on + strand, within A4249_RS08410 at 1688.179 kb on + strand, within A4249_RS08410 at 1688.180 kb on - strand, within A4249_RS08410 at 1688.180 kb on - strand, within A4249_RS08410 at 1688.180 kb on - strand, within A4249_RS08410 at 1688.180 kb on - strand, within A4249_RS08410 at 1688.180 kb on - strand, within A4249_RS08410 at 1688.180 kb on - strand, within A4249_RS08410 at 1688.180 kb on - strand, within A4249_RS08410 at 1688.181 kb on + strand, within A4249_RS08410 at 1688.182 kb on - strand, within A4249_RS08410 at 1688.405 kb on - strand, within A4249_RS08410 at 1688.405 kb on - strand, within A4249_RS08410 at 1688.405 kb on - strand, within A4249_RS08410 at 1688.405 kb on - strand, within A4249_RS08410 at 1688.461 kb on + strand, within A4249_RS08410 at 1688.462 kb on - strand, within A4249_RS08410 at 1688.462 kb on - strand, within A4249_RS08410 at 1688.464 kb on - strand, within A4249_RS08410 at 1688.464 kb on - strand, within A4249_RS08410 at 1688.861 kb on - strand at 1689.228 kb on + strand, within A4249_RS08415 at 1689.228 kb on + strand, within A4249_RS08415 at 1689.228 kb on + strand, within A4249_RS08415 at 1689.228 kb on + strand, within A4249_RS08415 at 1689.228 kb on + strand, within A4249_RS08415 at 1689.255 kb on + strand, within A4249_RS08415 at 1689.255 kb on + strand, within A4249_RS08415 at 1689.255 kb on + strand, within A4249_RS08415 at 1689.255 kb on + strand, within A4249_RS08415 at 1689.255 kb on + strand, within A4249_RS08415 at 1689.255 kb on + strand, within A4249_RS08415 at 1689.256 kb on - strand, within A4249_RS08415 at 1689.256 kb on - strand, within A4249_RS08415 at 1689.256 kb on - strand, within A4249_RS08415 at 1689.261 kb on + strand, within A4249_RS08415 at 1689.261 kb on + strand, within A4249_RS08415 at 1689.292 kb on + strand, within A4249_RS08415 at 1689.400 kb on + strand, within A4249_RS08415 at 1689.400 kb on + strand, within A4249_RS08415 at 1689.401 kb on - strand, within A4249_RS08415 at 1689.401 kb on - strand, within A4249_RS08415 at 1689.401 kb on - strand, within A4249_RS08415 at 1689.401 kb on - strand, within A4249_RS08415 at 1689.401 kb on - strand, within A4249_RS08415 at 1689.401 kb on - strand, within A4249_RS08415 at 1689.410 kb on + strand, within A4249_RS08415 at 1689.410 kb on + strand, within A4249_RS08415 at 1689.410 kb on + strand, within A4249_RS08415 at 1689.410 kb on + strand, within A4249_RS08415 at 1689.410 kb on + strand, within A4249_RS08415 at 1689.410 kb on + strand, within A4249_RS08415 at 1689.410 kb on + strand, within A4249_RS08415 at 1689.411 kb on - strand, within A4249_RS08415 at 1689.411 kb on - strand, within A4249_RS08415 at 1689.411 kb on - strand, within A4249_RS08415 at 1689.411 kb on - strand, within A4249_RS08415 at 1689.411 kb on - strand, within A4249_RS08415 at 1689.411 kb on - strand, within A4249_RS08415 at 1689.411 kb on - strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.789 kb on + strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.790 kb on - strand, within A4249_RS08415 at 1689.912 kb on + strand, within A4249_RS08415 at 1689.912 kb on + strand, within A4249_RS08415 at 1689.912 kb on + strand, within A4249_RS08415 at 1689.913 kb on - strand, within A4249_RS08415 at 1689.913 kb on - strand, within A4249_RS08415 at 1689.913 kb on - strand, within A4249_RS08415 at 1689.913 kb on - strand, within A4249_RS08415 at 1689.913 kb on - strand, within A4249_RS08415 at 1689.999 kb on + strand at 1690.086 kb on + strand at 1690.087 kb on - strand at 1690.724 kb on + strand, within A4249_RS08425
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 1,688,053 + A4249_RS08410 0.39 -0.3 1,688,054 - A4249_RS08410 0.39 -0.3 1,688,054 - A4249_RS08410 0.39 -0.1 1,688,056 + A4249_RS08410 0.39 +0.0 1,688,056 + A4249_RS08410 0.39 -0.3 1,688,056 + A4249_RS08410 0.39 +0.3 1,688,057 - A4249_RS08410 0.39 -0.3 1,688,063 - A4249_RS08410 0.40 -0.3 1,688,140 + A4249_RS08410 0.45 -0.3 1,688,161 + A4249_RS08410 0.46 -0.2 1,688,179 + A4249_RS08410 0.47 -0.2 1,688,179 + A4249_RS08410 0.47 -0.3 1,688,180 - A4249_RS08410 0.48 -0.4 1,688,180 - A4249_RS08410 0.48 +0.1 1,688,180 - A4249_RS08410 0.48 +0.0 1,688,180 - A4249_RS08410 0.48 -0.3 1,688,180 - A4249_RS08410 0.48 -0.3 1,688,180 - A4249_RS08410 0.48 -0.4 1,688,180 - A4249_RS08410 0.48 +0.1 1,688,181 + A4249_RS08410 0.48 -0.2 1,688,182 - A4249_RS08410 0.48 +0.0 1,688,405 - A4249_RS08410 0.63 +0.1 1,688,405 - A4249_RS08410 0.63 -0.5 1,688,405 - A4249_RS08410 0.63 +0.3 1,688,405 - A4249_RS08410 0.63 -0.5 1,688,461 + A4249_RS08410 0.66 -0.5 1,688,462 - A4249_RS08410 0.66 -0.2 1,688,462 - A4249_RS08410 0.66 -0.2 1,688,464 - A4249_RS08410 0.67 +0.0 1,688,464 - A4249_RS08410 0.67 +0.0 1,688,861 - +0.1 1,689,228 + A4249_RS08415 0.19 -0.2 1,689,228 + A4249_RS08415 0.19 -0.3 1,689,228 + A4249_RS08415 0.19 +0.4 1,689,228 + A4249_RS08415 0.19 -0.2 1,689,228 + A4249_RS08415 0.19 -0.3 1,689,255 + A4249_RS08415 0.22 -0.8 1,689,255 + A4249_RS08415 0.22 +0.2 1,689,255 + A4249_RS08415 0.22 +0.4 1,689,255 + A4249_RS08415 0.22 -0.1 1,689,255 + A4249_RS08415 0.22 +1.3 1,689,255 + A4249_RS08415 0.22 -0.2 1,689,256 - A4249_RS08415 0.22 -0.7 1,689,256 - A4249_RS08415 0.22 -0.3 1,689,256 - A4249_RS08415 0.22 +0.4 1,689,261 + A4249_RS08415 0.22 -0.9 1,689,261 + A4249_RS08415 0.22 -0.3 1,689,292 + A4249_RS08415 0.25 -0.5 1,689,400 + A4249_RS08415 0.35 -0.7 1,689,400 + A4249_RS08415 0.35 -0.0 1,689,401 - A4249_RS08415 0.35 -1.1 1,689,401 - A4249_RS08415 0.35 -0.3 1,689,401 - A4249_RS08415 0.35 -0.9 1,689,401 - A4249_RS08415 0.35 -1.0 1,689,401 - A4249_RS08415 0.35 -0.2 1,689,401 - A4249_RS08415 0.35 -2.6 1,689,410 + A4249_RS08415 0.36 +0.1 1,689,410 + A4249_RS08415 0.36 -0.3 1,689,410 + A4249_RS08415 0.36 +0.7 1,689,410 + A4249_RS08415 0.36 -0.5 1,689,410 + A4249_RS08415 0.36 -0.1 1,689,410 + A4249_RS08415 0.36 +1.9 1,689,410 + A4249_RS08415 0.36 +0.7 1,689,411 - A4249_RS08415 0.36 -0.4 1,689,411 - A4249_RS08415 0.36 +0.5 1,689,411 - A4249_RS08415 0.36 +0.2 1,689,411 - A4249_RS08415 0.36 +0.0 1,689,411 - A4249_RS08415 0.36 -0.3 1,689,411 - A4249_RS08415 0.36 -1.7 1,689,411 - A4249_RS08415 0.36 -0.0 1,689,789 + A4249_RS08415 0.72 +1.4 1,689,789 + A4249_RS08415 0.72 -0.5 1,689,789 + A4249_RS08415 0.72 +0.6 1,689,789 + A4249_RS08415 0.72 +0.0 1,689,789 + A4249_RS08415 0.72 +0.4 1,689,789 + A4249_RS08415 0.72 -0.7 1,689,789 + A4249_RS08415 0.72 +0.3 1,689,789 + A4249_RS08415 0.72 -0.0 1,689,789 + A4249_RS08415 0.72 +0.7 1,689,789 + A4249_RS08415 0.72 +1.0 1,689,789 + A4249_RS08415 0.72 +0.2 1,689,789 + A4249_RS08415 0.72 -0.6 1,689,789 + A4249_RS08415 0.72 +0.3 1,689,789 + A4249_RS08415 0.72 -0.3 1,689,789 + A4249_RS08415 0.72 +0.1 1,689,789 + A4249_RS08415 0.72 -1.0 1,689,789 + A4249_RS08415 0.72 -0.4 1,689,789 + A4249_RS08415 0.72 +3.0 1,689,789 + A4249_RS08415 0.72 -0.6 1,689,789 + A4249_RS08415 0.72 +0.2 1,689,789 + A4249_RS08415 0.72 -0.2 1,689,789 + A4249_RS08415 0.72 -0.2 1,689,789 + A4249_RS08415 0.72 +0.7 1,689,789 + A4249_RS08415 0.72 -1.4 1,689,789 + A4249_RS08415 0.72 -0.2 1,689,789 + A4249_RS08415 0.72 -0.4 1,689,789 + A4249_RS08415 0.72 -0.6 1,689,790 - A4249_RS08415 0.72 +0.3 1,689,790 - A4249_RS08415 0.72 +0.0 1,689,790 - A4249_RS08415 0.72 -0.1 1,689,790 - A4249_RS08415 0.72 -1.4 1,689,790 - A4249_RS08415 0.72 -0.1 1,689,790 - A4249_RS08415 0.72 -0.5 1,689,790 - A4249_RS08415 0.72 -1.8 1,689,790 - A4249_RS08415 0.72 +0.9 1,689,790 - A4249_RS08415 0.72 -0.3 1,689,790 - A4249_RS08415 0.72 -0.7 1,689,790 - A4249_RS08415 0.72 -0.4 1,689,790 - A4249_RS08415 0.72 +0.0 1,689,790 - A4249_RS08415 0.72 -0.9 1,689,790 - A4249_RS08415 0.72 -0.0 1,689,790 - A4249_RS08415 0.72 -0.5 1,689,790 - A4249_RS08415 0.72 +0.3 1,689,790 - A4249_RS08415 0.72 +0.2 1,689,790 - A4249_RS08415 0.72 -0.2 1,689,790 - A4249_RS08415 0.72 -0.1 1,689,790 - A4249_RS08415 0.72 -2.0 1,689,790 - A4249_RS08415 0.72 -0.4 1,689,790 - A4249_RS08415 0.72 -0.5 1,689,790 - A4249_RS08415 0.72 -1.3 1,689,790 - A4249_RS08415 0.72 -0.3 1,689,912 + A4249_RS08415 0.83 -0.0 1,689,912 + A4249_RS08415 0.83 +1.0 1,689,912 + A4249_RS08415 0.83 -0.4 1,689,913 - A4249_RS08415 0.83 +0.2 1,689,913 - A4249_RS08415 0.83 -0.1 1,689,913 - A4249_RS08415 0.83 +1.2 1,689,913 - A4249_RS08415 0.83 -0.7 1,689,913 - A4249_RS08415 0.83 -0.4 1,689,999 + +0.4 1,690,086 + +0.2 1,690,087 - -1.7 1,690,724 + A4249_RS08425 0.19 -0.3
Or see this region's nucleotide sequence