Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07610

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS07600 and A4249_RS07605 are separated by 63 nucleotidesA4249_RS07605 and A4249_RS07610 are separated by 73 nucleotidesA4249_RS07610 and A4249_RS07615 are separated by 142 nucleotidesA4249_RS07615 and A4249_RS07620 are separated by 4 nucleotides A4249_RS07600: A4249_RS07600 - hypothetical protein, at 1,515,461 to 1,515,655 _RS07600 A4249_RS07605: A4249_RS07605 - MoxR family ATPase, at 1,515,719 to 1,516,579 _RS07605 A4249_RS07610: A4249_RS07610 - methyltransferase type 11, at 1,516,653 to 1,517,456 _RS07610 A4249_RS07615: A4249_RS07615 - HD family hydrolase, at 1,517,599 to 1,518,192 _RS07615 A4249_RS07620: A4249_RS07620 - NAD regulator, at 1,518,197 to 1,519,129 _RS07620 Position (kb) 1516 1517 1518Strain fitness (log2 ratio) -2 -1 0 1at 1515.718 kb on + strandat 1515.718 kb on + strandat 1515.718 kb on + strandat 1515.718 kb on + strandat 1515.719 kb on - strandat 1515.719 kb on - strandat 1515.746 kb on + strandat 1515.746 kb on + strandat 1515.746 kb on + strandat 1515.746 kb on + strandat 1515.746 kb on + strandat 1515.746 kb on + strandat 1515.746 kb on + strandat 1515.746 kb on + strandat 1515.746 kb on + strandat 1515.746 kb on + strandat 1515.747 kb on - strandat 1515.747 kb on - strandat 1515.747 kb on - strandat 1515.747 kb on - strandat 1515.747 kb on - strandat 1515.747 kb on - strandat 1515.747 kb on - strandat 1515.748 kb on + strandat 1515.748 kb on + strandat 1515.748 kb on + strandat 1515.748 kb on + strandat 1515.748 kb on + strandat 1515.748 kb on + strandat 1515.748 kb on + strandat 1515.748 kb on + strandat 1515.748 kb on + strandat 1515.749 kb on - strandat 1515.749 kb on - strandat 1515.749 kb on - strandat 1515.749 kb on - strandat 1515.749 kb on - strandat 1515.749 kb on - strandat 1515.851 kb on + strand, within A4249_RS07605at 1515.852 kb on - strand, within A4249_RS07605at 1515.852 kb on - strand, within A4249_RS07605at 1515.852 kb on - strand, within A4249_RS07605at 1515.852 kb on - strand, within A4249_RS07605at 1515.852 kb on - strand, within A4249_RS07605at 1515.929 kb on + strand, within A4249_RS07605at 1515.929 kb on + strand, within A4249_RS07605at 1515.929 kb on + strand, within A4249_RS07605at 1515.929 kb on + strand, within A4249_RS07605at 1515.929 kb on + strand, within A4249_RS07605at 1515.929 kb on + strand, within A4249_RS07605at 1515.929 kb on + strand, within A4249_RS07605at 1515.929 kb on + strand, within A4249_RS07605at 1515.929 kb on + strand, within A4249_RS07605at 1515.929 kb on + strand, within A4249_RS07605at 1515.930 kb on - strand, within A4249_RS07605at 1515.930 kb on - strand, within A4249_RS07605at 1515.930 kb on - strand, within A4249_RS07605at 1515.930 kb on - strand, within A4249_RS07605at 1515.930 kb on - strand, within A4249_RS07605at 1515.930 kb on - strand, within A4249_RS07605at 1515.930 kb on - strand, within A4249_RS07605at 1515.930 kb on - strand, within A4249_RS07605at 1515.930 kb on - strand, within A4249_RS07605at 1515.930 kb on - strand, within A4249_RS07605at 1515.935 kb on + strand, within A4249_RS07605at 1515.935 kb on + strand, within A4249_RS07605at 1515.936 kb on - strand, within A4249_RS07605at 1515.936 kb on - strand, within A4249_RS07605at 1516.001 kb on + strand, within A4249_RS07605at 1516.001 kb on + strand, within A4249_RS07605at 1516.002 kb on - strand, within A4249_RS07605at 1516.133 kb on + strand, within A4249_RS07605at 1516.133 kb on + strand, within A4249_RS07605at 1516.133 kb on + strand, within A4249_RS07605at 1516.133 kb on + strand, within A4249_RS07605at 1516.133 kb on + strand, within A4249_RS07605at 1516.133 kb on + strand, within A4249_RS07605at 1516.133 kb on + strand, within A4249_RS07605at 1516.133 kb on + strand, within A4249_RS07605at 1516.133 kb on + strand, within A4249_RS07605at 1516.134 kb on - strand, within A4249_RS07605at 1516.134 kb on - strand, within A4249_RS07605at 1516.134 kb on - strand, within A4249_RS07605at 1516.134 kb on - strand, within A4249_RS07605at 1516.134 kb on - strand, within A4249_RS07605at 1516.134 kb on - strand, within A4249_RS07605at 1516.134 kb on - strand, within A4249_RS07605at 1516.134 kb on - strand, within A4249_RS07605at 1516.346 kb on + strand, within A4249_RS07605at 1516.346 kb on + strand, within A4249_RS07605at 1516.346 kb on + strand, within A4249_RS07605at 1516.346 kb on + strand, within A4249_RS07605at 1516.347 kb on - strand, within A4249_RS07605at 1516.347 kb on - strand, within A4249_RS07605at 1516.347 kb on - strand, within A4249_RS07605at 1516.347 kb on - strand, within A4249_RS07605at 1516.347 kb on - strand, within A4249_RS07605at 1516.347 kb on - strand, within A4249_RS07605at 1516.432 kb on + strand, within A4249_RS07605at 1517.283 kb on + strand, within A4249_RS07610at 1517.283 kb on + strand, within A4249_RS07610at 1517.284 kb on - strand, within A4249_RS07610at 1517.290 kb on + strand, within A4249_RS07610at 1517.290 kb on + strand, within A4249_RS07610at 1517.504 kb on + strandat 1517.504 kb on + strandat 1517.505 kb on - strandat 1517.505 kb on - strandat 1517.505 kb on - strandat 1517.830 kb on + strand, within A4249_RS07615at 1517.830 kb on + strand, within A4249_RS07615at 1517.830 kb on + strand, within A4249_RS07615at 1517.830 kb on + strand, within A4249_RS07615at 1517.831 kb on - strand, within A4249_RS07615at 1517.831 kb on - strand, within A4249_RS07615at 1517.831 kb on - strand, within A4249_RS07615at 1517.881 kb on + strand, within A4249_RS07615at 1517.881 kb on + strand, within A4249_RS07615at 1517.881 kb on + strand, within A4249_RS07615at 1517.881 kb on + strand, within A4249_RS07615at 1517.882 kb on - strand, within A4249_RS07615at 1518.070 kb on + strand, within A4249_RS07615at 1518.071 kb on - strand, within A4249_RS07615at 1518.071 kb on - strand, within A4249_RS07615at 1518.118 kb on + strand, within A4249_RS07615at 1518.119 kb on - strand, within A4249_RS07615at 1518.190 kb on + strandat 1518.191 kb on - strandat 1518.191 kb on - strandat 1518.363 kb on + strand, within A4249_RS07620at 1518.419 kb on + strand, within A4249_RS07620at 1518.419 kb on + strand, within A4249_RS07620at 1518.419 kb on + strand, within A4249_RS07620at 1518.419 kb on + strand, within A4249_RS07620at 1518.419 kb on + strand, within A4249_RS07620at 1518.419 kb on + strand, within A4249_RS07620at 1518.420 kb on - strand, within A4249_RS07620at 1518.420 kb on - strand, within A4249_RS07620at 1518.420 kb on - strand, within A4249_RS07620at 1518.420 kb on - strand, within A4249_RS07620at 1518.420 kb on - strand, within A4249_RS07620at 1518.420 kb on - strand, within A4249_RS07620at 1518.420 kb on - strand, within A4249_RS07620at 1518.420 kb on - strand, within A4249_RS07620at 1518.420 kb on - strand, within A4249_RS07620

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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1,515,718 + -0.4
1,515,718 + +0.2
1,515,718 + -0.0
1,515,718 + -0.3
1,515,719 - -0.5
1,515,719 - +0.0
1,515,746 + +1.2
1,515,746 + +1.1
1,515,746 + -1.9
1,515,746 + +0.2
1,515,746 + -0.1
1,515,746 + +0.2
1,515,746 + -0.4
1,515,746 + -0.7
1,515,746 + -1.2
1,515,746 + +1.4
1,515,747 - +0.5
1,515,747 - +0.3
1,515,747 - +0.4
1,515,747 - -0.1
1,515,747 - -2.4
1,515,747 - +1.5
1,515,747 - -0.5
1,515,748 + +0.6
1,515,748 + -0.5
1,515,748 + +0.7
1,515,748 + -0.1
1,515,748 + -0.5
1,515,748 + -0.4
1,515,748 + +0.1
1,515,748 + -1.0
1,515,748 + +0.7
1,515,749 - -1.2
1,515,749 - +0.2
1,515,749 - +0.5
1,515,749 - -0.3
1,515,749 - +1.2
1,515,749 - +1.2
1,515,851 + A4249_RS07605 0.15 +0.1
1,515,852 - A4249_RS07605 0.15 -0.7
1,515,852 - A4249_RS07605 0.15 -0.5
1,515,852 - A4249_RS07605 0.15 -0.5
1,515,852 - A4249_RS07605 0.15 -0.3
1,515,852 - A4249_RS07605 0.15 -0.6
1,515,929 + A4249_RS07605 0.24 -0.9
1,515,929 + A4249_RS07605 0.24 +0.6
1,515,929 + A4249_RS07605 0.24 +0.1
1,515,929 + A4249_RS07605 0.24 +0.5
1,515,929 + A4249_RS07605 0.24 +0.8
1,515,929 + A4249_RS07605 0.24 +0.2
1,515,929 + A4249_RS07605 0.24 +0.5
1,515,929 + A4249_RS07605 0.24 -0.1
1,515,929 + A4249_RS07605 0.24 -0.1
1,515,929 + A4249_RS07605 0.24 +1.2
1,515,930 - A4249_RS07605 0.25 -0.2
1,515,930 - A4249_RS07605 0.25 -1.1
1,515,930 - A4249_RS07605 0.25 -0.5
1,515,930 - A4249_RS07605 0.25 +0.1
1,515,930 - A4249_RS07605 0.25 +0.7
1,515,930 - A4249_RS07605 0.25 -0.6
1,515,930 - A4249_RS07605 0.25 +0.5
1,515,930 - A4249_RS07605 0.25 +0.8
1,515,930 - A4249_RS07605 0.25 -0.8
1,515,930 - A4249_RS07605 0.25 +0.3
1,515,935 + A4249_RS07605 0.25 -0.2
1,515,935 + A4249_RS07605 0.25 -0.1
1,515,936 - A4249_RS07605 0.25 +0.5
1,515,936 - A4249_RS07605 0.25 +0.2
1,516,001 + A4249_RS07605 0.33 +0.2
1,516,001 + A4249_RS07605 0.33 +0.5
1,516,002 - A4249_RS07605 0.33 -0.8
1,516,133 + A4249_RS07605 0.48 -2.4
1,516,133 + A4249_RS07605 0.48 -0.8
1,516,133 + A4249_RS07605 0.48 -1.7
1,516,133 + A4249_RS07605 0.48 +0.3
1,516,133 + A4249_RS07605 0.48 -0.4
1,516,133 + A4249_RS07605 0.48 -0.5
1,516,133 + A4249_RS07605 0.48 -1.4
1,516,133 + A4249_RS07605 0.48 +0.2
1,516,133 + A4249_RS07605 0.48 -0.3
1,516,134 - A4249_RS07605 0.48 -1.1
1,516,134 - A4249_RS07605 0.48 -1.1
1,516,134 - A4249_RS07605 0.48 -0.9
1,516,134 - A4249_RS07605 0.48 -0.6
1,516,134 - A4249_RS07605 0.48 -0.5
1,516,134 - A4249_RS07605 0.48 +0.1
1,516,134 - A4249_RS07605 0.48 +0.0
1,516,134 - A4249_RS07605 0.48 -1.7
1,516,346 + A4249_RS07605 0.73 -0.1
1,516,346 + A4249_RS07605 0.73 -0.8
1,516,346 + A4249_RS07605 0.73 -0.6
1,516,346 + A4249_RS07605 0.73 +1.1
1,516,347 - A4249_RS07605 0.73 +0.3
1,516,347 - A4249_RS07605 0.73 +1.0
1,516,347 - A4249_RS07605 0.73 +0.2
1,516,347 - A4249_RS07605 0.73 -0.2
1,516,347 - A4249_RS07605 0.73 +0.1
1,516,347 - A4249_RS07605 0.73 +0.2
1,516,432 + A4249_RS07605 0.83 -0.4
1,517,283 + A4249_RS07610 0.78 +0.7
1,517,283 + A4249_RS07610 0.78 +0.0
1,517,284 - A4249_RS07610 0.78 +1.3
1,517,290 + A4249_RS07610 0.79 +0.7
1,517,290 + A4249_RS07610 0.79 +0.0
1,517,504 + -0.5
1,517,504 + -0.9
1,517,505 - -0.3
1,517,505 - +0.2
1,517,505 - -1.3
1,517,830 + A4249_RS07615 0.39 -0.5
1,517,830 + A4249_RS07615 0.39 -0.1
1,517,830 + A4249_RS07615 0.39 -0.2
1,517,830 + A4249_RS07615 0.39 -0.1
1,517,831 - A4249_RS07615 0.39 -0.9
1,517,831 - A4249_RS07615 0.39 +0.9
1,517,831 - A4249_RS07615 0.39 -0.9
1,517,881 + A4249_RS07615 0.47 +0.3
1,517,881 + A4249_RS07615 0.47 -0.3
1,517,881 + A4249_RS07615 0.47 +0.4
1,517,881 + A4249_RS07615 0.47 -0.8
1,517,882 - A4249_RS07615 0.48 +0.0
1,518,070 + A4249_RS07615 0.79 +0.8
1,518,071 - A4249_RS07615 0.79 +0.9
1,518,071 - A4249_RS07615 0.79 +0.1
1,518,118 + A4249_RS07615 0.87 +0.8
1,518,119 - A4249_RS07615 0.88 -0.1
1,518,190 + -0.7
1,518,191 - -1.5
1,518,191 - +1.5
1,518,363 + A4249_RS07620 0.18 +1.1
1,518,419 + A4249_RS07620 0.24 +0.3
1,518,419 + A4249_RS07620 0.24 -0.6
1,518,419 + A4249_RS07620 0.24 -0.4
1,518,419 + A4249_RS07620 0.24 +0.3
1,518,419 + A4249_RS07620 0.24 -0.7
1,518,419 + A4249_RS07620 0.24 +0.3
1,518,420 - A4249_RS07620 0.24 -0.2
1,518,420 - A4249_RS07620 0.24 -1.2
1,518,420 - A4249_RS07620 0.24 +0.4
1,518,420 - A4249_RS07620 0.24 -0.6
1,518,420 - A4249_RS07620 0.24 -0.4
1,518,420 - A4249_RS07620 0.24 -0.2
1,518,420 - A4249_RS07620 0.24 +0.4
1,518,420 - A4249_RS07620 0.24 +0.3
1,518,420 - A4249_RS07620 0.24 +0.3

Or see this region's nucleotide sequence