Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS07235 and A4249_RS07240 are separated by 172 nucleotides A4249_RS07240 and A4249_RS07245 overlap by 4 nucleotides A4249_RS07245 and A4249_RS07250 are separated by 120 nucleotides
A4249_RS07235: A4249_RS07235 - sugar transferase, at 1,448,879 to 1,449,448
_RS07235
A4249_RS07240: A4249_RS07240 - hypothetical protein, at 1,449,621 to 1,450,118
_RS07240
A4249_RS07245: A4249_RS07245 - M28 family peptidase, at 1,450,115 to 1,451,071
_RS07245
A4249_RS07250: A4249_RS07250 - NAD-dependent DNA ligase LigA, at 1,451,192 to 1,453,525
_RS07250
Position (kb)
1450
1451
1452 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1449.314 kb on + strand, within A4249_RS07235 at 1449.314 kb on + strand, within A4249_RS07235 at 1449.315 kb on - strand, within A4249_RS07235 at 1449.315 kb on - strand, within A4249_RS07235 at 1449.315 kb on - strand, within A4249_RS07235 at 1449.820 kb on + strand, within A4249_RS07240 at 1449.820 kb on + strand, within A4249_RS07240 at 1449.820 kb on + strand, within A4249_RS07240 at 1449.820 kb on + strand, within A4249_RS07240 at 1449.820 kb on + strand, within A4249_RS07240 at 1449.820 kb on + strand, within A4249_RS07240 at 1449.821 kb on - strand, within A4249_RS07240 at 1449.821 kb on - strand, within A4249_RS07240 at 1449.821 kb on - strand, within A4249_RS07240 at 1449.992 kb on + strand, within A4249_RS07240 at 1449.993 kb on - strand, within A4249_RS07240 at 1450.002 kb on + strand, within A4249_RS07240 at 1450.002 kb on + strand, within A4249_RS07240 at 1450.003 kb on - strand, within A4249_RS07240 at 1450.003 kb on - strand, within A4249_RS07240 at 1450.071 kb on + strand at 1450.072 kb on - strand at 1450.072 kb on - strand at 1450.225 kb on - strand, within A4249_RS07245 at 1450.225 kb on - strand, within A4249_RS07245 at 1450.236 kb on + strand, within A4249_RS07245 at 1450.236 kb on + strand, within A4249_RS07245 at 1450.236 kb on + strand, within A4249_RS07245 at 1450.236 kb on + strand, within A4249_RS07245 at 1450.237 kb on - strand, within A4249_RS07245 at 1450.237 kb on - strand, within A4249_RS07245 at 1450.237 kb on - strand, within A4249_RS07245 at 1450.237 kb on - strand, within A4249_RS07245 at 1450.237 kb on - strand, within A4249_RS07245 at 1450.251 kb on + strand, within A4249_RS07245 at 1450.251 kb on + strand, within A4249_RS07245 at 1450.251 kb on + strand, within A4249_RS07245 at 1450.251 kb on + strand, within A4249_RS07245 at 1450.251 kb on + strand, within A4249_RS07245 at 1450.251 kb on + strand, within A4249_RS07245 at 1450.252 kb on - strand, within A4249_RS07245 at 1450.252 kb on - strand, within A4249_RS07245 at 1450.252 kb on - strand, within A4249_RS07245 at 1450.252 kb on - strand, within A4249_RS07245 at 1450.252 kb on - strand, within A4249_RS07245 at 1450.252 kb on - strand, within A4249_RS07245 at 1450.252 kb on - strand, within A4249_RS07245 at 1450.410 kb on + strand, within A4249_RS07245 at 1450.410 kb on + strand, within A4249_RS07245 at 1450.410 kb on + strand, within A4249_RS07245 at 1450.410 kb on + strand, within A4249_RS07245 at 1450.410 kb on + strand, within A4249_RS07245 at 1450.410 kb on + strand, within A4249_RS07245 at 1450.410 kb on + strand, within A4249_RS07245 at 1450.411 kb on - strand, within A4249_RS07245 at 1450.411 kb on - strand, within A4249_RS07245 at 1450.411 kb on - strand, within A4249_RS07245 at 1450.411 kb on - strand, within A4249_RS07245 at 1450.411 kb on - strand, within A4249_RS07245 at 1450.411 kb on - strand, within A4249_RS07245 at 1450.411 kb on - strand, within A4249_RS07245 at 1450.411 kb on - strand, within A4249_RS07245 at 1450.411 kb on - strand, within A4249_RS07245 at 1450.411 kb on - strand, within A4249_RS07245 at 1450.427 kb on + strand, within A4249_RS07245 at 1450.427 kb on + strand, within A4249_RS07245 at 1450.427 kb on + strand, within A4249_RS07245 at 1450.427 kb on + strand, within A4249_RS07245 at 1450.427 kb on + strand, within A4249_RS07245 at 1450.428 kb on - strand, within A4249_RS07245 at 1450.428 kb on - strand, within A4249_RS07245 at 1450.428 kb on - strand, within A4249_RS07245 at 1450.428 kb on - strand, within A4249_RS07245 at 1450.428 kb on - strand, within A4249_RS07245 at 1450.428 kb on - strand, within A4249_RS07245 at 1450.428 kb on - strand, within A4249_RS07245 at 1450.428 kb on - strand, within A4249_RS07245 at 1450.428 kb on - strand, within A4249_RS07245 at 1450.428 kb on - strand, within A4249_RS07245 at 1450.640 kb on - strand, within A4249_RS07245 at 1450.689 kb on + strand, within A4249_RS07245 at 1450.690 kb on - strand, within A4249_RS07245 at 1450.708 kb on + strand, within A4249_RS07245 at 1450.708 kb on + strand, within A4249_RS07245 at 1450.708 kb on + strand, within A4249_RS07245 at 1450.708 kb on + strand, within A4249_RS07245 at 1450.709 kb on - strand, within A4249_RS07245 at 1450.709 kb on - strand, within A4249_RS07245 at 1450.710 kb on + strand, within A4249_RS07245 at 1450.710 kb on + strand, within A4249_RS07245 at 1450.710 kb on + strand, within A4249_RS07245 at 1450.710 kb on + strand, within A4249_RS07245 at 1450.711 kb on - strand, within A4249_RS07245 at 1450.711 kb on - strand, within A4249_RS07245 at 1450.711 kb on - strand, within A4249_RS07245 at 1450.711 kb on - strand, within A4249_RS07245 at 1450.711 kb on - strand, within A4249_RS07245 at 1450.711 kb on - strand, within A4249_RS07245 at 1450.750 kb on + strand, within A4249_RS07245 at 1450.751 kb on - strand, within A4249_RS07245 at 1450.751 kb on - strand, within A4249_RS07245 at 1450.866 kb on + strand, within A4249_RS07245 at 1450.866 kb on + strand, within A4249_RS07245 at 1450.866 kb on + strand, within A4249_RS07245 at 1450.867 kb on - strand, within A4249_RS07245 at 1450.867 kb on - strand, within A4249_RS07245 at 1450.867 kb on - strand, within A4249_RS07245 at 1450.867 kb on - strand, within A4249_RS07245 at 1450.867 kb on - strand, within A4249_RS07245 at 1450.900 kb on + strand, within A4249_RS07245 at 1450.900 kb on + strand, within A4249_RS07245 at 1450.901 kb on - strand, within A4249_RS07245 at 1450.901 kb on - strand, within A4249_RS07245 at 1451.071 kb on + strand at 1451.071 kb on + strand at 1451.071 kb on + strand at 1451.071 kb on + strand at 1451.071 kb on + strand at 1451.071 kb on + strand at 1451.071 kb on + strand at 1451.071 kb on + strand at 1451.071 kb on + strand at 1451.072 kb on - strand at 1451.072 kb on - strand at 1451.072 kb on - strand at 1451.072 kb on - strand at 1451.072 kb on - strand at 1451.072 kb on - strand at 1451.100 kb on - strand at 1451.126 kb on + strand at 1451.126 kb on + strand at 1451.126 kb on + strand at 1451.126 kb on + strand at 1451.126 kb on + strand at 1451.127 kb on - strand at 1451.127 kb on - strand at 1451.127 kb on - strand at 1451.127 kb on - strand at 1451.179 kb on + strand at 1451.179 kb on + strand at 1451.179 kb on + strand at 1451.179 kb on + strand at 1451.179 kb on + strand at 1451.179 kb on + strand at 1451.179 kb on + strand at 1451.179 kb on + strand at 1451.180 kb on - strand at 1451.180 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 1,449,314 + A4249_RS07235 0.76 +0.1 1,449,314 + A4249_RS07235 0.76 -0.7 1,449,315 - A4249_RS07235 0.76 +0.5 1,449,315 - A4249_RS07235 0.76 -1.0 1,449,315 - A4249_RS07235 0.76 +0.4 1,449,820 + A4249_RS07240 0.40 -0.8 1,449,820 + A4249_RS07240 0.40 -0.8 1,449,820 + A4249_RS07240 0.40 -0.4 1,449,820 + A4249_RS07240 0.40 -0.6 1,449,820 + A4249_RS07240 0.40 -0.5 1,449,820 + A4249_RS07240 0.40 -1.0 1,449,821 - A4249_RS07240 0.40 -1.0 1,449,821 - A4249_RS07240 0.40 -0.4 1,449,821 - A4249_RS07240 0.40 -1.3 1,449,992 + A4249_RS07240 0.74 +0.2 1,449,993 - A4249_RS07240 0.75 -0.1 1,450,002 + A4249_RS07240 0.77 -0.1 1,450,002 + A4249_RS07240 0.77 +0.0 1,450,003 - A4249_RS07240 0.77 +1.3 1,450,003 - A4249_RS07240 0.77 +0.0 1,450,071 + -0.5 1,450,072 - -0.5 1,450,072 - -0.1 1,450,225 - A4249_RS07245 0.11 -0.5 1,450,225 - A4249_RS07245 0.11 -0.3 1,450,236 + A4249_RS07245 0.13 +0.3 1,450,236 + A4249_RS07245 0.13 -0.8 1,450,236 + A4249_RS07245 0.13 +1.1 1,450,236 + A4249_RS07245 0.13 -0.4 1,450,237 - A4249_RS07245 0.13 +0.5 1,450,237 - A4249_RS07245 0.13 +0.4 1,450,237 - A4249_RS07245 0.13 +0.3 1,450,237 - A4249_RS07245 0.13 -0.3 1,450,237 - A4249_RS07245 0.13 +0.2 1,450,251 + A4249_RS07245 0.14 +0.7 1,450,251 + A4249_RS07245 0.14 +0.1 1,450,251 + A4249_RS07245 0.14 -0.9 1,450,251 + A4249_RS07245 0.14 +0.1 1,450,251 + A4249_RS07245 0.14 -0.9 1,450,251 + A4249_RS07245 0.14 +0.1 1,450,252 - A4249_RS07245 0.14 -1.2 1,450,252 - A4249_RS07245 0.14 -0.1 1,450,252 - A4249_RS07245 0.14 -1.5 1,450,252 - A4249_RS07245 0.14 +0.3 1,450,252 - A4249_RS07245 0.14 +0.3 1,450,252 - A4249_RS07245 0.14 -0.2 1,450,252 - A4249_RS07245 0.14 -0.5 1,450,410 + A4249_RS07245 0.31 -0.6 1,450,410 + A4249_RS07245 0.31 -0.6 1,450,410 + A4249_RS07245 0.31 +0.1 1,450,410 + A4249_RS07245 0.31 +1.7 1,450,410 + A4249_RS07245 0.31 +0.3 1,450,410 + A4249_RS07245 0.31 +0.7 1,450,410 + A4249_RS07245 0.31 +0.3 1,450,411 - A4249_RS07245 0.31 +0.5 1,450,411 - A4249_RS07245 0.31 +0.2 1,450,411 - A4249_RS07245 0.31 +0.1 1,450,411 - A4249_RS07245 0.31 -1.2 1,450,411 - A4249_RS07245 0.31 +0.8 1,450,411 - A4249_RS07245 0.31 +1.2 1,450,411 - A4249_RS07245 0.31 -0.6 1,450,411 - A4249_RS07245 0.31 -0.8 1,450,411 - A4249_RS07245 0.31 +0.8 1,450,411 - A4249_RS07245 0.31 -0.4 1,450,427 + A4249_RS07245 0.33 -0.2 1,450,427 + A4249_RS07245 0.33 +0.5 1,450,427 + A4249_RS07245 0.33 -0.8 1,450,427 + A4249_RS07245 0.33 -0.0 1,450,427 + A4249_RS07245 0.33 -2.3 1,450,428 - A4249_RS07245 0.33 -1.0 1,450,428 - A4249_RS07245 0.33 -0.5 1,450,428 - A4249_RS07245 0.33 -0.7 1,450,428 - A4249_RS07245 0.33 -0.7 1,450,428 - A4249_RS07245 0.33 -2.1 1,450,428 - A4249_RS07245 0.33 -0.2 1,450,428 - A4249_RS07245 0.33 -0.3 1,450,428 - A4249_RS07245 0.33 -1.0 1,450,428 - A4249_RS07245 0.33 +1.8 1,450,428 - A4249_RS07245 0.33 -0.3 1,450,640 - A4249_RS07245 0.55 +0.5 1,450,689 + A4249_RS07245 0.60 +0.3 1,450,690 - A4249_RS07245 0.60 -1.5 1,450,708 + A4249_RS07245 0.62 +0.8 1,450,708 + A4249_RS07245 0.62 -2.2 1,450,708 + A4249_RS07245 0.62 +0.9 1,450,708 + A4249_RS07245 0.62 +0.4 1,450,709 - A4249_RS07245 0.62 +0.4 1,450,709 - A4249_RS07245 0.62 +0.4 1,450,710 + A4249_RS07245 0.62 +0.3 1,450,710 + A4249_RS07245 0.62 -0.8 1,450,710 + A4249_RS07245 0.62 -1.4 1,450,710 + A4249_RS07245 0.62 +0.2 1,450,711 - A4249_RS07245 0.62 -1.0 1,450,711 - A4249_RS07245 0.62 -0.3 1,450,711 - A4249_RS07245 0.62 +0.3 1,450,711 - A4249_RS07245 0.62 -1.0 1,450,711 - A4249_RS07245 0.62 -0.3 1,450,711 - A4249_RS07245 0.62 -1.0 1,450,750 + A4249_RS07245 0.66 -0.0 1,450,751 - A4249_RS07245 0.66 +0.3 1,450,751 - A4249_RS07245 0.66 -0.6 1,450,866 + A4249_RS07245 0.78 +0.4 1,450,866 + A4249_RS07245 0.78 -0.3 1,450,866 + A4249_RS07245 0.78 +1.9 1,450,867 - A4249_RS07245 0.79 -0.6 1,450,867 - A4249_RS07245 0.79 -0.9 1,450,867 - A4249_RS07245 0.79 +0.8 1,450,867 - A4249_RS07245 0.79 -1.8 1,450,867 - A4249_RS07245 0.79 -2.1 1,450,900 + A4249_RS07245 0.82 -0.3 1,450,900 + A4249_RS07245 0.82 -0.5 1,450,901 - A4249_RS07245 0.82 +0.8 1,450,901 - A4249_RS07245 0.82 +0.0 1,451,071 + +0.6 1,451,071 + +0.5 1,451,071 + -0.0 1,451,071 + +0.1 1,451,071 + -1.1 1,451,071 + -1.0 1,451,071 + -0.0 1,451,071 + +1.6 1,451,071 + -0.6 1,451,072 - +0.3 1,451,072 - -0.3 1,451,072 - -0.6 1,451,072 - -0.3 1,451,072 - -0.1 1,451,072 - +0.8 1,451,100 - -0.7 1,451,126 + +0.0 1,451,126 + +0.2 1,451,126 + +0.9 1,451,126 + +1.3 1,451,126 + -0.4 1,451,127 - -0.0 1,451,127 - +0.9 1,451,127 - -0.4 1,451,127 - -0.4 1,451,179 + +0.2 1,451,179 + +0.3 1,451,179 + -1.0 1,451,179 + +0.5 1,451,179 + -0.3 1,451,179 + -0.3 1,451,179 + -0.7 1,451,179 + +0.3 1,451,180 - -0.2 1,451,180 - +0.1
Or see this region's nucleotide sequence