Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06690

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06680 and A4249_RS06685 are separated by 84 nucleotidesA4249_RS06685 and A4249_RS06690 are separated by 48 nucleotidesA4249_RS06690 and A4249_RS06695 are separated by 26 nucleotides A4249_RS06680: A4249_RS06680 - tipN, at 1,360,238 to 1,362,820 _RS06680 A4249_RS06685: A4249_RS06685 - hypothetical protein, at 1,362,905 to 1,363,498 _RS06685 A4249_RS06690: A4249_RS06690 - DUF423 domain-containing protein, at 1,363,547 to 1,363,909 _RS06690 A4249_RS06695: A4249_RS06695 - prolyl aminopeptidase, at 1,363,936 to 1,364,916 _RS06695 Position (kb) 1363 1364Strain fitness (log2 ratio) -3 -2 -1 0 1at 1362.687 kb on - strandat 1362.687 kb on - strandat 1362.818 kb on + strandat 1362.819 kb on - strandat 1362.852 kb on + strandat 1362.852 kb on + strandat 1362.852 kb on + strandat 1362.852 kb on + strandat 1362.852 kb on + strandat 1362.853 kb on - strandat 1362.853 kb on - strandat 1362.853 kb on - strandat 1362.853 kb on - strandat 1362.853 kb on - strandat 1362.892 kb on + strandat 1362.893 kb on - strandat 1362.965 kb on + strand, within A4249_RS06685at 1363.196 kb on + strand, within A4249_RS06685at 1363.196 kb on + strand, within A4249_RS06685at 1363.196 kb on + strand, within A4249_RS06685at 1363.197 kb on - strand, within A4249_RS06685at 1363.331 kb on + strand, within A4249_RS06685at 1363.332 kb on - strand, within A4249_RS06685at 1363.332 kb on - strand, within A4249_RS06685at 1363.332 kb on - strand, within A4249_RS06685at 1363.340 kb on + strand, within A4249_RS06685at 1363.340 kb on + strand, within A4249_RS06685at 1363.535 kb on + strandat 1363.535 kb on + strandat 1363.535 kb on + strandat 1363.536 kb on - strandat 1363.674 kb on - strand, within A4249_RS06690at 1363.674 kb on - strand, within A4249_RS06690at 1363.833 kb on + strand, within A4249_RS06690at 1363.833 kb on + strand, within A4249_RS06690at 1363.918 kb on + strandat 1363.919 kb on - strandat 1363.993 kb on + strandat 1363.993 kb on + strandat 1363.994 kb on - strandat 1363.994 kb on - strandat 1364.035 kb on + strand, within A4249_RS06695at 1364.035 kb on + strand, within A4249_RS06695at 1364.036 kb on - strand, within A4249_RS06695at 1364.036 kb on - strand, within A4249_RS06695at 1364.036 kb on - strand, within A4249_RS06695at 1364.036 kb on - strand, within A4249_RS06695at 1364.038 kb on + strand, within A4249_RS06695at 1364.038 kb on + strand, within A4249_RS06695at 1364.039 kb on - strand, within A4249_RS06695at 1364.039 kb on - strand, within A4249_RS06695at 1364.039 kb on - strand, within A4249_RS06695at 1364.143 kb on + strand, within A4249_RS06695at 1364.143 kb on + strand, within A4249_RS06695at 1364.317 kb on + strand, within A4249_RS06695at 1364.317 kb on + strand, within A4249_RS06695at 1364.344 kb on - strand, within A4249_RS06695at 1364.344 kb on - strand, within A4249_RS06695at 1364.357 kb on + strand, within A4249_RS06695at 1364.358 kb on - strand, within A4249_RS06695at 1364.401 kb on + strand, within A4249_RS06695at 1364.401 kb on + strand, within A4249_RS06695at 1364.401 kb on + strand, within A4249_RS06695at 1364.401 kb on + strand, within A4249_RS06695at 1364.402 kb on - strand, within A4249_RS06695at 1364.402 kb on - strand, within A4249_RS06695at 1364.402 kb on - strand, within A4249_RS06695at 1364.402 kb on - strand, within A4249_RS06695at 1364.494 kb on + strand, within A4249_RS06695at 1364.495 kb on - strand, within A4249_RS06695at 1364.495 kb on - strand, within A4249_RS06695at 1364.495 kb on - strand, within A4249_RS06695at 1364.495 kb on - strand, within A4249_RS06695at 1364.495 kb on - strand, within A4249_RS06695at 1364.495 kb on - strand, within A4249_RS06695at 1364.495 kb on - strand, within A4249_RS06695at 1364.497 kb on + strand, within A4249_RS06695at 1364.497 kb on + strand, within A4249_RS06695at 1364.497 kb on + strand, within A4249_RS06695at 1364.498 kb on - strand, within A4249_RS06695at 1364.498 kb on - strand, within A4249_RS06695at 1364.498 kb on - strand, within A4249_RS06695at 1364.498 kb on - strand, within A4249_RS06695at 1364.498 kb on - strand, within A4249_RS06695at 1364.498 kb on - strand, within A4249_RS06695at 1364.498 kb on - strand, within A4249_RS06695at 1364.709 kb on + strand, within A4249_RS06695at 1364.710 kb on - strand, within A4249_RS06695at 1364.727 kb on + strand, within A4249_RS06695at 1364.727 kb on + strand, within A4249_RS06695at 1364.728 kb on - strand, within A4249_RS06695at 1364.728 kb on - strand, within A4249_RS06695at 1364.728 kb on - strand, within A4249_RS06695

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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1,362,687 - +0.2
1,362,687 - -0.1
1,362,818 + -0.3
1,362,819 - -0.6
1,362,852 + -0.3
1,362,852 + -0.1
1,362,852 + -0.6
1,362,852 + +0.9
1,362,852 + +0.1
1,362,853 - -1.5
1,362,853 - -0.6
1,362,853 - -0.1
1,362,853 - +0.3
1,362,853 - -0.3
1,362,892 + -0.7
1,362,893 - -0.1
1,362,965 + A4249_RS06685 0.10 -0.4
1,363,196 + A4249_RS06685 0.49 +1.0
1,363,196 + A4249_RS06685 0.49 -0.9
1,363,196 + A4249_RS06685 0.49 -0.2
1,363,197 - A4249_RS06685 0.49 -1.8
1,363,331 + A4249_RS06685 0.72 -0.2
1,363,332 - A4249_RS06685 0.72 +1.5
1,363,332 - A4249_RS06685 0.72 -0.8
1,363,332 - A4249_RS06685 0.72 +0.4
1,363,340 + A4249_RS06685 0.73 -0.4
1,363,340 + A4249_RS06685 0.73 +0.7
1,363,535 + -0.2
1,363,535 + +0.1
1,363,535 + -0.3
1,363,536 - -0.0
1,363,674 - A4249_RS06690 0.35 -0.3
1,363,674 - A4249_RS06690 0.35 -0.3
1,363,833 + A4249_RS06690 0.79 -1.3
1,363,833 + A4249_RS06690 0.79 +0.4
1,363,918 + +1.2
1,363,919 - -0.0
1,363,993 + -0.2
1,363,993 + +1.5
1,363,994 - +0.8
1,363,994 - -0.0
1,364,035 + A4249_RS06695 0.10 -0.1
1,364,035 + A4249_RS06695 0.10 -0.2
1,364,036 - A4249_RS06695 0.10 -0.5
1,364,036 - A4249_RS06695 0.10 -0.1
1,364,036 - A4249_RS06695 0.10 -0.5
1,364,036 - A4249_RS06695 0.10 -0.5
1,364,038 + A4249_RS06695 0.10 -2.5
1,364,038 + A4249_RS06695 0.10 -0.2
1,364,039 - A4249_RS06695 0.10 +0.3
1,364,039 - A4249_RS06695 0.10 -0.3
1,364,039 - A4249_RS06695 0.10 +0.9
1,364,143 + A4249_RS06695 0.21 -1.6
1,364,143 + A4249_RS06695 0.21 +0.2
1,364,317 + A4249_RS06695 0.39 -0.0
1,364,317 + A4249_RS06695 0.39 -0.4
1,364,344 - A4249_RS06695 0.42 -0.4
1,364,344 - A4249_RS06695 0.42 -0.5
1,364,357 + A4249_RS06695 0.43 +1.0
1,364,358 - A4249_RS06695 0.43 -2.9
1,364,401 + A4249_RS06695 0.47 -0.7
1,364,401 + A4249_RS06695 0.47 +0.8
1,364,401 + A4249_RS06695 0.47 -0.1
1,364,401 + A4249_RS06695 0.47 +0.7
1,364,402 - A4249_RS06695 0.48 +0.5
1,364,402 - A4249_RS06695 0.48 +0.7
1,364,402 - A4249_RS06695 0.48 -0.9
1,364,402 - A4249_RS06695 0.48 +0.0
1,364,494 + A4249_RS06695 0.57 -0.2
1,364,495 - A4249_RS06695 0.57 +0.6
1,364,495 - A4249_RS06695 0.57 +0.0
1,364,495 - A4249_RS06695 0.57 -0.4
1,364,495 - A4249_RS06695 0.57 -1.1
1,364,495 - A4249_RS06695 0.57 -0.8
1,364,495 - A4249_RS06695 0.57 -0.1
1,364,495 - A4249_RS06695 0.57 -0.5
1,364,497 + A4249_RS06695 0.57 +0.3
1,364,497 + A4249_RS06695 0.57 -0.7
1,364,497 + A4249_RS06695 0.57 +1.3
1,364,498 - A4249_RS06695 0.57 +1.1
1,364,498 - A4249_RS06695 0.57 +0.8
1,364,498 - A4249_RS06695 0.57 +1.1
1,364,498 - A4249_RS06695 0.57 -0.3
1,364,498 - A4249_RS06695 0.57 +0.1
1,364,498 - A4249_RS06695 0.57 -0.1
1,364,498 - A4249_RS06695 0.57 -0.6
1,364,709 + A4249_RS06695 0.79 +0.3
1,364,710 - A4249_RS06695 0.79 -0.2
1,364,727 + A4249_RS06695 0.81 -1.3
1,364,727 + A4249_RS06695 0.81 +0.1
1,364,728 - A4249_RS06695 0.81 -1.1
1,364,728 - A4249_RS06695 0.81 -0.1
1,364,728 - A4249_RS06695 0.81 -0.8

Or see this region's nucleotide sequence