Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS05605 and A4249_RS05610 are separated by 32 nucleotides A4249_RS05610 and A4249_RS05615 are separated by 78 nucleotides
A4249_RS05605: A4249_RS05605 - cyclopropane-fatty-acyl-phospholipid synthase family protein, at 1,147,115 to 1,148,335
_RS05605
A4249_RS05610: A4249_RS05610 - deoxyribodipyrimidine photo-lyase, at 1,148,368 to 1,149,825
_RS05610
A4249_RS05615: A4249_RS05615 - 3-deoxy-8-phosphooctulonate synthase, at 1,149,904 to 1,150,815
_RS05615
Position (kb)
1148
1149
1150 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1147.395 kb on + strand, within A4249_RS05605 at 1147.395 kb on + strand, within A4249_RS05605 at 1147.395 kb on + strand, within A4249_RS05605 at 1147.396 kb on - strand, within A4249_RS05605 at 1147.396 kb on - strand, within A4249_RS05605 at 1147.396 kb on - strand, within A4249_RS05605 at 1147.396 kb on - strand, within A4249_RS05605 at 1147.396 kb on - strand, within A4249_RS05605 at 1147.405 kb on + strand, within A4249_RS05605 at 1147.406 kb on - strand, within A4249_RS05605 at 1147.425 kb on + strand, within A4249_RS05605 at 1147.425 kb on + strand, within A4249_RS05605 at 1147.425 kb on + strand, within A4249_RS05605 at 1147.425 kb on + strand, within A4249_RS05605 at 1147.425 kb on + strand, within A4249_RS05605 at 1147.426 kb on - strand, within A4249_RS05605 at 1147.426 kb on - strand, within A4249_RS05605 at 1147.426 kb on - strand, within A4249_RS05605 at 1147.524 kb on + strand, within A4249_RS05605 at 1147.593 kb on + strand, within A4249_RS05605 at 1147.601 kb on - strand, within A4249_RS05605 at 1147.601 kb on - strand, within A4249_RS05605 at 1147.609 kb on + strand, within A4249_RS05605 at 1147.610 kb on - strand, within A4249_RS05605 at 1147.659 kb on + strand, within A4249_RS05605 at 1147.659 kb on + strand, within A4249_RS05605 at 1147.659 kb on + strand, within A4249_RS05605 at 1147.659 kb on + strand, within A4249_RS05605 at 1147.659 kb on + strand, within A4249_RS05605 at 1147.660 kb on - strand, within A4249_RS05605 at 1147.681 kb on + strand, within A4249_RS05605 at 1147.681 kb on + strand, within A4249_RS05605 at 1147.681 kb on + strand, within A4249_RS05605 at 1147.681 kb on + strand, within A4249_RS05605 at 1147.681 kb on + strand, within A4249_RS05605 at 1147.681 kb on + strand, within A4249_RS05605 at 1147.681 kb on + strand, within A4249_RS05605 at 1147.803 kb on + strand, within A4249_RS05605 at 1147.803 kb on + strand, within A4249_RS05605 at 1147.804 kb on - strand, within A4249_RS05605 at 1147.837 kb on + strand, within A4249_RS05605 at 1147.838 kb on - strand, within A4249_RS05605 at 1147.863 kb on + strand, within A4249_RS05605 at 1147.863 kb on + strand, within A4249_RS05605 at 1147.863 kb on + strand, within A4249_RS05605 at 1147.864 kb on - strand, within A4249_RS05605 at 1147.864 kb on - strand, within A4249_RS05605 at 1147.864 kb on - strand, within A4249_RS05605 at 1147.864 kb on - strand, within A4249_RS05605 at 1147.864 kb on - strand, within A4249_RS05605 at 1147.893 kb on + strand, within A4249_RS05605 at 1147.893 kb on + strand, within A4249_RS05605 at 1147.894 kb on - strand, within A4249_RS05605 at 1147.894 kb on - strand, within A4249_RS05605 at 1147.894 kb on - strand, within A4249_RS05605 at 1147.894 kb on - strand, within A4249_RS05605 at 1147.914 kb on + strand, within A4249_RS05605 at 1147.914 kb on + strand, within A4249_RS05605 at 1147.915 kb on - strand, within A4249_RS05605 at 1147.927 kb on + strand, within A4249_RS05605 at 1147.955 kb on - strand, within A4249_RS05605 at 1147.955 kb on - strand, within A4249_RS05605 at 1148.031 kb on + strand, within A4249_RS05605 at 1148.031 kb on + strand, within A4249_RS05605 at 1148.031 kb on + strand, within A4249_RS05605 at 1148.031 kb on + strand, within A4249_RS05605 at 1148.031 kb on + strand, within A4249_RS05605 at 1148.031 kb on + strand, within A4249_RS05605 at 1148.031 kb on + strand, within A4249_RS05605 at 1148.031 kb on + strand, within A4249_RS05605 at 1148.031 kb on + strand, within A4249_RS05605 at 1148.031 kb on + strand, within A4249_RS05605 at 1148.031 kb on + strand, within A4249_RS05605 at 1148.031 kb on + strand, within A4249_RS05605 at 1148.031 kb on + strand, within A4249_RS05605 at 1148.031 kb on + strand, within A4249_RS05605 at 1148.031 kb on + strand, within A4249_RS05605 at 1148.031 kb on + strand, within A4249_RS05605 at 1148.031 kb on + strand, within A4249_RS05605 at 1148.032 kb on - strand, within A4249_RS05605 at 1148.032 kb on - strand, within A4249_RS05605 at 1148.032 kb on - strand, within A4249_RS05605 at 1148.032 kb on - strand, within A4249_RS05605 at 1148.032 kb on - strand, within A4249_RS05605 at 1148.032 kb on - strand, within A4249_RS05605 at 1148.032 kb on - strand, within A4249_RS05605 at 1148.032 kb on - strand, within A4249_RS05605 at 1148.032 kb on - strand, within A4249_RS05605 at 1148.032 kb on - strand, within A4249_RS05605 at 1148.032 kb on - strand, within A4249_RS05605 at 1148.032 kb on - strand, within A4249_RS05605 at 1148.092 kb on + strand, within A4249_RS05605 at 1148.094 kb on + strand, within A4249_RS05605 at 1148.094 kb on + strand, within A4249_RS05605 at 1148.094 kb on + strand, within A4249_RS05605 at 1148.094 kb on + strand, within A4249_RS05605 at 1148.094 kb on + strand, within A4249_RS05605 at 1148.094 kb on + strand, within A4249_RS05605 at 1148.094 kb on + strand, within A4249_RS05605 at 1148.094 kb on + strand, within A4249_RS05605 at 1148.094 kb on + strand, within A4249_RS05605 at 1148.094 kb on + strand, within A4249_RS05605 at 1148.095 kb on - strand, within A4249_RS05605 at 1148.095 kb on - strand, within A4249_RS05605 at 1148.095 kb on - strand, within A4249_RS05605 at 1148.095 kb on - strand, within A4249_RS05605 at 1148.148 kb on + strand, within A4249_RS05605 at 1148.148 kb on + strand, within A4249_RS05605 at 1148.148 kb on + strand, within A4249_RS05605 at 1148.148 kb on + strand, within A4249_RS05605 at 1148.148 kb on + strand, within A4249_RS05605 at 1148.148 kb on + strand, within A4249_RS05605 at 1148.149 kb on - strand, within A4249_RS05605 at 1148.149 kb on - strand, within A4249_RS05605 at 1148.149 kb on - strand, within A4249_RS05605 at 1148.357 kb on + strand at 1148.357 kb on + strand at 1148.357 kb on + strand at 1148.358 kb on - strand at 1148.358 kb on - strand at 1148.358 kb on - strand at 1148.358 kb on - strand at 1148.358 kb on - strand at 1148.358 kb on - strand at 1148.358 kb on - strand at 1148.359 kb on + strand at 1148.359 kb on + strand at 1148.359 kb on + strand at 1148.359 kb on + strand at 1148.360 kb on - strand at 1148.360 kb on - strand at 1148.360 kb on - strand at 1148.360 kb on - strand at 1148.360 kb on - strand at 1148.360 kb on - strand at 1148.360 kb on - strand at 1148.360 kb on - strand at 1148.360 kb on - strand at 1148.455 kb on + strand at 1148.456 kb on - strand at 1148.479 kb on + strand at 1148.479 kb on + strand at 1148.479 kb on + strand at 1148.480 kb on - strand at 1148.582 kb on + strand, within A4249_RS05610 at 1148.583 kb on - strand, within A4249_RS05610 at 1148.583 kb on - strand, within A4249_RS05610 at 1148.921 kb on + strand, within A4249_RS05610 at 1148.922 kb on - strand, within A4249_RS05610 at 1148.922 kb on - strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.032 kb on - strand, within A4249_RS05610 at 1149.032 kb on - strand, within A4249_RS05610 at 1149.032 kb on - strand, within A4249_RS05610 at 1149.032 kb on - strand, within A4249_RS05610 at 1149.032 kb on - strand, within A4249_RS05610 at 1149.161 kb on + strand, within A4249_RS05610 at 1149.161 kb on + strand, within A4249_RS05610 at 1149.161 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.182 kb on - strand, within A4249_RS05610 at 1149.182 kb on - strand, within A4249_RS05610 at 1149.182 kb on - strand, within A4249_RS05610 at 1149.182 kb on - strand, within A4249_RS05610 at 1149.392 kb on + strand, within A4249_RS05610 at 1149.392 kb on + strand, within A4249_RS05610 at 1149.393 kb on - strand, within A4249_RS05610 at 1149.393 kb on - strand, within A4249_RS05610 at 1149.393 kb on - strand, within A4249_RS05610 at 1149.717 kb on + strand at 1149.717 kb on + strand at 1149.718 kb on - strand at 1149.718 kb on - strand at 1149.719 kb on + strand at 1149.719 kb on + strand at 1149.719 kb on + strand at 1149.719 kb on + strand at 1149.720 kb on - strand at 1149.720 kb on - strand at 1149.720 kb on - strand at 1149.720 kb on - strand at 1149.720 kb on - strand at 1149.843 kb on + strand at 1149.844 kb on - strand at 1149.844 kb on - strand at 1149.885 kb on + strand at 1149.885 kb on + strand at 1149.885 kb on + strand at 1149.885 kb on + strand at 1149.886 kb on - strand at 1149.886 kb on - strand at 1149.886 kb on - strand at 1150.822 kb on + strand at 1150.823 kb on - strand at 1150.823 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 1,147,395 + A4249_RS05605 0.23 +1.3 1,147,395 + A4249_RS05605 0.23 +0.1 1,147,395 + A4249_RS05605 0.23 +2.0 1,147,396 - A4249_RS05605 0.23 +0.5 1,147,396 - A4249_RS05605 0.23 +0.7 1,147,396 - A4249_RS05605 0.23 -0.5 1,147,396 - A4249_RS05605 0.23 -0.4 1,147,396 - A4249_RS05605 0.23 +0.1 1,147,405 + A4249_RS05605 0.24 -0.1 1,147,406 - A4249_RS05605 0.24 +0.0 1,147,425 + A4249_RS05605 0.25 -0.5 1,147,425 + A4249_RS05605 0.25 -0.3 1,147,425 + A4249_RS05605 0.25 +0.6 1,147,425 + A4249_RS05605 0.25 -0.2 1,147,425 + A4249_RS05605 0.25 -0.7 1,147,426 - A4249_RS05605 0.25 +2.6 1,147,426 - A4249_RS05605 0.25 +1.0 1,147,426 - A4249_RS05605 0.25 +0.9 1,147,524 + A4249_RS05605 0.33 +1.3 1,147,593 + A4249_RS05605 0.39 +1.1 1,147,601 - A4249_RS05605 0.40 -0.2 1,147,601 - A4249_RS05605 0.40 -0.2 1,147,609 + A4249_RS05605 0.40 +0.2 1,147,610 - A4249_RS05605 0.41 +0.5 1,147,659 + A4249_RS05605 0.45 -0.5 1,147,659 + A4249_RS05605 0.45 -2.3 1,147,659 + A4249_RS05605 0.45 +0.4 1,147,659 + A4249_RS05605 0.45 -0.4 1,147,659 + A4249_RS05605 0.45 -0.8 1,147,660 - A4249_RS05605 0.45 -0.0 1,147,681 + A4249_RS05605 0.46 +0.6 1,147,681 + A4249_RS05605 0.46 +1.2 1,147,681 + A4249_RS05605 0.46 -0.1 1,147,681 + A4249_RS05605 0.46 +0.3 1,147,681 + A4249_RS05605 0.46 -0.2 1,147,681 + A4249_RS05605 0.46 +0.4 1,147,681 + A4249_RS05605 0.46 -0.1 1,147,803 + A4249_RS05605 0.56 +0.3 1,147,803 + A4249_RS05605 0.56 +1.0 1,147,804 - A4249_RS05605 0.56 -0.8 1,147,837 + A4249_RS05605 0.59 -0.8 1,147,838 - A4249_RS05605 0.59 +0.3 1,147,863 + A4249_RS05605 0.61 +1.3 1,147,863 + A4249_RS05605 0.61 +0.0 1,147,863 + A4249_RS05605 0.61 +0.2 1,147,864 - A4249_RS05605 0.61 +0.7 1,147,864 - A4249_RS05605 0.61 +0.3 1,147,864 - A4249_RS05605 0.61 -0.1 1,147,864 - A4249_RS05605 0.61 -0.8 1,147,864 - A4249_RS05605 0.61 -1.6 1,147,893 + A4249_RS05605 0.64 -0.1 1,147,893 + A4249_RS05605 0.64 +1.4 1,147,894 - A4249_RS05605 0.64 +0.8 1,147,894 - A4249_RS05605 0.64 -0.3 1,147,894 - A4249_RS05605 0.64 -0.1 1,147,894 - A4249_RS05605 0.64 +0.0 1,147,914 + A4249_RS05605 0.65 +0.2 1,147,914 + A4249_RS05605 0.65 -0.4 1,147,915 - A4249_RS05605 0.66 +0.2 1,147,927 + A4249_RS05605 0.67 -0.1 1,147,955 - A4249_RS05605 0.69 -0.4 1,147,955 - A4249_RS05605 0.69 +0.1 1,148,031 + A4249_RS05605 0.75 -0.7 1,148,031 + A4249_RS05605 0.75 +1.0 1,148,031 + A4249_RS05605 0.75 -1.1 1,148,031 + A4249_RS05605 0.75 -0.4 1,148,031 + A4249_RS05605 0.75 -0.6 1,148,031 + A4249_RS05605 0.75 -0.2 1,148,031 + A4249_RS05605 0.75 +1.6 1,148,031 + A4249_RS05605 0.75 -0.8 1,148,031 + A4249_RS05605 0.75 +0.5 1,148,031 + A4249_RS05605 0.75 +0.7 1,148,031 + A4249_RS05605 0.75 +0.5 1,148,031 + A4249_RS05605 0.75 +1.4 1,148,031 + A4249_RS05605 0.75 +0.6 1,148,031 + A4249_RS05605 0.75 -0.2 1,148,031 + A4249_RS05605 0.75 +1.3 1,148,031 + A4249_RS05605 0.75 -0.0 1,148,031 + A4249_RS05605 0.75 -0.7 1,148,032 - A4249_RS05605 0.75 -0.2 1,148,032 - A4249_RS05605 0.75 +0.7 1,148,032 - A4249_RS05605 0.75 -0.4 1,148,032 - A4249_RS05605 0.75 +0.1 1,148,032 - A4249_RS05605 0.75 -0.7 1,148,032 - A4249_RS05605 0.75 +0.3 1,148,032 - A4249_RS05605 0.75 +1.4 1,148,032 - A4249_RS05605 0.75 -1.8 1,148,032 - A4249_RS05605 0.75 +0.0 1,148,032 - A4249_RS05605 0.75 +0.4 1,148,032 - A4249_RS05605 0.75 +0.6 1,148,032 - A4249_RS05605 0.75 -0.1 1,148,092 + A4249_RS05605 0.80 +0.4 1,148,094 + A4249_RS05605 0.80 -1.0 1,148,094 + A4249_RS05605 0.80 -0.4 1,148,094 + A4249_RS05605 0.80 -0.1 1,148,094 + A4249_RS05605 0.80 +1.6 1,148,094 + A4249_RS05605 0.80 +0.4 1,148,094 + A4249_RS05605 0.80 -1.2 1,148,094 + A4249_RS05605 0.80 +0.7 1,148,094 + A4249_RS05605 0.80 +0.0 1,148,094 + A4249_RS05605 0.80 +0.4 1,148,094 + A4249_RS05605 0.80 +0.3 1,148,095 - A4249_RS05605 0.80 -0.4 1,148,095 - A4249_RS05605 0.80 -0.1 1,148,095 - A4249_RS05605 0.80 +0.5 1,148,095 - A4249_RS05605 0.80 -0.4 1,148,148 + A4249_RS05605 0.85 +0.9 1,148,148 + A4249_RS05605 0.85 +0.8 1,148,148 + A4249_RS05605 0.85 +0.7 1,148,148 + A4249_RS05605 0.85 +0.1 1,148,148 + A4249_RS05605 0.85 -0.6 1,148,148 + A4249_RS05605 0.85 +0.2 1,148,149 - A4249_RS05605 0.85 -1.2 1,148,149 - A4249_RS05605 0.85 -0.2 1,148,149 - A4249_RS05605 0.85 +0.1 1,148,357 + +0.2 1,148,357 + +0.5 1,148,357 + +1.3 1,148,358 - -0.3 1,148,358 - +0.2 1,148,358 - -0.9 1,148,358 - -0.4 1,148,358 - -0.3 1,148,358 - -0.8 1,148,358 - -0.1 1,148,359 + -0.3 1,148,359 + +0.0 1,148,359 + -0.6 1,148,359 + +0.5 1,148,360 - -0.4 1,148,360 - -0.6 1,148,360 - -0.4 1,148,360 - -0.2 1,148,360 - -0.0 1,148,360 - -0.7 1,148,360 - -1.0 1,148,360 - -0.3 1,148,360 - +0.1 1,148,455 + +0.6 1,148,456 - -0.7 1,148,479 + +1.5 1,148,479 + -1.6 1,148,479 + -0.2 1,148,480 - +0.0 1,148,582 + A4249_RS05610 0.15 +0.9 1,148,583 - A4249_RS05610 0.15 -0.1 1,148,583 - A4249_RS05610 0.15 -0.3 1,148,921 + A4249_RS05610 0.38 -0.1 1,148,922 - A4249_RS05610 0.38 +0.9 1,148,922 - A4249_RS05610 0.38 -1.1 1,149,031 + A4249_RS05610 0.45 -0.9 1,149,031 + A4249_RS05610 0.45 -0.8 1,149,031 + A4249_RS05610 0.45 -1.5 1,149,031 + A4249_RS05610 0.45 -0.3 1,149,031 + A4249_RS05610 0.45 -0.6 1,149,031 + A4249_RS05610 0.45 -0.6 1,149,031 + A4249_RS05610 0.45 -1.0 1,149,031 + A4249_RS05610 0.45 +1.4 1,149,031 + A4249_RS05610 0.45 +0.3 1,149,032 - A4249_RS05610 0.46 -0.1 1,149,032 - A4249_RS05610 0.46 -0.1 1,149,032 - A4249_RS05610 0.46 +0.2 1,149,032 - A4249_RS05610 0.46 +0.7 1,149,032 - A4249_RS05610 0.46 -1.0 1,149,161 + A4249_RS05610 0.54 +0.0 1,149,161 + A4249_RS05610 0.54 +0.7 1,149,161 + A4249_RS05610 0.54 +0.2 1,149,181 + A4249_RS05610 0.56 -0.1 1,149,181 + A4249_RS05610 0.56 -0.7 1,149,181 + A4249_RS05610 0.56 +0.5 1,149,181 + A4249_RS05610 0.56 -0.5 1,149,181 + A4249_RS05610 0.56 -0.9 1,149,181 + A4249_RS05610 0.56 -0.6 1,149,181 + A4249_RS05610 0.56 -0.7 1,149,181 + A4249_RS05610 0.56 -0.3 1,149,181 + A4249_RS05610 0.56 -0.5 1,149,181 + A4249_RS05610 0.56 +1.0 1,149,182 - A4249_RS05610 0.56 +0.6 1,149,182 - A4249_RS05610 0.56 -0.6 1,149,182 - A4249_RS05610 0.56 -0.1 1,149,182 - A4249_RS05610 0.56 +0.0 1,149,392 + A4249_RS05610 0.70 -0.1 1,149,392 + A4249_RS05610 0.70 +1.7 1,149,393 - A4249_RS05610 0.70 -1.1 1,149,393 - A4249_RS05610 0.70 +0.3 1,149,393 - A4249_RS05610 0.70 +0.3 1,149,717 + -0.7 1,149,717 + +0.3 1,149,718 - -1.9 1,149,718 - +0.0 1,149,719 + +0.6 1,149,719 + +0.0 1,149,719 + -0.4 1,149,719 + -0.2 1,149,720 - -0.1 1,149,720 - -0.8 1,149,720 - -1.2 1,149,720 - +0.6 1,149,720 - -0.9 1,149,843 + +0.0 1,149,844 - -0.7 1,149,844 - -0.4 1,149,885 + -1.5 1,149,885 + +0.1 1,149,885 + -0.4 1,149,885 + -0.5 1,149,886 - +0.4 1,149,886 - -1.1 1,149,886 - -0.6 1,150,822 + -1.1 1,150,823 - -0.2 1,150,823 - -1.0
Or see this region's nucleotide sequence