Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS05040 and A4249_RS05045 are separated by 19 nucleotides A4249_RS05045 and A4249_RS05050 are separated by 9 nucleotides A4249_RS05050 and A4249_RS05055 are separated by 57 nucleotides
A4249_RS05040: A4249_RS05040 - NADH:flavin oxidoreductase, at 1,042,761 to 1,043,858
_RS05040
A4249_RS05045: A4249_RS05045 - YbjQ family protein, at 1,043,878 to 1,044,198
_RS05045
A4249_RS05050: A4249_RS05050 - dihydrofolate reductase, at 1,044,208 to 1,044,735
_RS05050
A4249_RS05055: A4249_RS05055 - hypothetical protein, at 1,044,793 to 1,045,380
_RS05055
Position (kb)
1043
1044
1045 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1042.887 kb on + strand, within A4249_RS05040 at 1042.887 kb on + strand, within A4249_RS05040 at 1042.888 kb on - strand, within A4249_RS05040 at 1042.888 kb on - strand, within A4249_RS05040 at 1042.891 kb on - strand, within A4249_RS05040 at 1043.052 kb on - strand, within A4249_RS05040 at 1043.052 kb on - strand, within A4249_RS05040 at 1043.277 kb on + strand, within A4249_RS05040 at 1043.277 kb on + strand, within A4249_RS05040 at 1043.277 kb on + strand, within A4249_RS05040 at 1043.278 kb on - strand, within A4249_RS05040 at 1043.278 kb on - strand, within A4249_RS05040 at 1043.278 kb on - strand, within A4249_RS05040 at 1043.278 kb on - strand, within A4249_RS05040 at 1043.308 kb on + strand, within A4249_RS05040 at 1043.308 kb on + strand, within A4249_RS05040 at 1043.308 kb on + strand, within A4249_RS05040 at 1043.308 kb on + strand, within A4249_RS05040 at 1043.451 kb on + strand, within A4249_RS05040 at 1043.451 kb on + strand, within A4249_RS05040 at 1043.451 kb on + strand, within A4249_RS05040 at 1043.452 kb on - strand, within A4249_RS05040 at 1043.452 kb on - strand, within A4249_RS05040 at 1043.452 kb on - strand, within A4249_RS05040 at 1043.452 kb on - strand, within A4249_RS05040 at 1043.880 kb on - strand at 1043.910 kb on - strand, within A4249_RS05045 at 1043.954 kb on + strand, within A4249_RS05045 at 1043.955 kb on - strand, within A4249_RS05045 at 1044.014 kb on + strand, within A4249_RS05045 at 1044.014 kb on + strand, within A4249_RS05045 at 1044.014 kb on + strand, within A4249_RS05045 at 1044.015 kb on - strand, within A4249_RS05045 at 1044.015 kb on - strand, within A4249_RS05045 at 1044.015 kb on - strand, within A4249_RS05045 at 1044.015 kb on - strand, within A4249_RS05045 at 1044.050 kb on + strand, within A4249_RS05045 at 1044.051 kb on - strand, within A4249_RS05045 at 1044.051 kb on - strand, within A4249_RS05045 at 1044.051 kb on - strand, within A4249_RS05045 at 1044.194 kb on + strand at 1044.194 kb on + strand at 1044.194 kb on + strand at 1044.194 kb on + strand at 1044.194 kb on + strand at 1044.194 kb on + strand at 1044.194 kb on + strand at 1044.194 kb on + strand at 1044.194 kb on + strand at 1044.194 kb on + strand at 1044.194 kb on + strand at 1044.194 kb on + strand at 1044.195 kb on - strand at 1044.195 kb on - strand at 1044.195 kb on - strand at 1044.195 kb on - strand at 1044.195 kb on - strand at 1044.195 kb on - strand at 1044.195 kb on - strand at 1044.195 kb on - strand at 1044.195 kb on - strand at 1044.195 kb on - strand at 1044.195 kb on - strand at 1044.195 kb on - strand at 1044.209 kb on + strand at 1044.749 kb on - strand at 1044.802 kb on + strand at 1044.802 kb on + strand at 1044.802 kb on + strand at 1044.802 kb on + strand at 1044.802 kb on + strand at 1044.803 kb on - strand at 1044.803 kb on - strand at 1044.803 kb on - strand at 1044.803 kb on - strand at 1044.803 kb on - strand at 1044.803 kb on - strand at 1044.803 kb on - strand at 1044.896 kb on - strand, within A4249_RS05055 at 1044.896 kb on - strand, within A4249_RS05055 at 1044.896 kb on - strand, within A4249_RS05055 at 1044.940 kb on + strand, within A4249_RS05055 at 1044.940 kb on + strand, within A4249_RS05055 at 1044.940 kb on + strand, within A4249_RS05055 at 1044.940 kb on + strand, within A4249_RS05055 at 1044.940 kb on + strand, within A4249_RS05055 at 1044.941 kb on - strand, within A4249_RS05055 at 1044.941 kb on - strand, within A4249_RS05055 at 1044.941 kb on - strand, within A4249_RS05055 at 1044.941 kb on - strand, within A4249_RS05055 at 1044.956 kb on + strand, within A4249_RS05055 at 1044.957 kb on - strand, within A4249_RS05055 at 1044.957 kb on - strand, within A4249_RS05055 at 1045.054 kb on + strand, within A4249_RS05055
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 1,042,887 + A4249_RS05040 0.11 -0.3 1,042,887 + A4249_RS05040 0.11 +0.7 1,042,888 - A4249_RS05040 0.12 -1.9 1,042,888 - A4249_RS05040 0.12 -0.5 1,042,891 - A4249_RS05040 0.12 -0.6 1,043,052 - A4249_RS05040 0.27 +1.4 1,043,052 - A4249_RS05040 0.27 -2.1 1,043,277 + A4249_RS05040 0.47 -0.9 1,043,277 + A4249_RS05040 0.47 +1.6 1,043,277 + A4249_RS05040 0.47 -0.3 1,043,278 - A4249_RS05040 0.47 +0.9 1,043,278 - A4249_RS05040 0.47 +0.4 1,043,278 - A4249_RS05040 0.47 -0.8 1,043,278 - A4249_RS05040 0.47 +0.2 1,043,308 + A4249_RS05040 0.50 +0.6 1,043,308 + A4249_RS05040 0.50 +0.6 1,043,308 + A4249_RS05040 0.50 -0.2 1,043,308 + A4249_RS05040 0.50 +0.7 1,043,451 + A4249_RS05040 0.63 -0.3 1,043,451 + A4249_RS05040 0.63 +0.6 1,043,451 + A4249_RS05040 0.63 -0.6 1,043,452 - A4249_RS05040 0.63 +0.1 1,043,452 - A4249_RS05040 0.63 -0.0 1,043,452 - A4249_RS05040 0.63 -0.1 1,043,452 - A4249_RS05040 0.63 +0.6 1,043,880 - +0.4 1,043,910 - A4249_RS05045 0.10 -0.3 1,043,954 + A4249_RS05045 0.24 -0.3 1,043,955 - A4249_RS05045 0.24 +0.2 1,044,014 + A4249_RS05045 0.42 -0.3 1,044,014 + A4249_RS05045 0.42 -0.3 1,044,014 + A4249_RS05045 0.42 -0.9 1,044,015 - A4249_RS05045 0.43 -0.1 1,044,015 - A4249_RS05045 0.43 -1.1 1,044,015 - A4249_RS05045 0.43 -0.8 1,044,015 - A4249_RS05045 0.43 -0.8 1,044,050 + A4249_RS05045 0.54 -0.3 1,044,051 - A4249_RS05045 0.54 -0.1 1,044,051 - A4249_RS05045 0.54 -0.3 1,044,051 - A4249_RS05045 0.54 -0.8 1,044,194 + +0.5 1,044,194 + -0.4 1,044,194 + +0.3 1,044,194 + +1.0 1,044,194 + +0.5 1,044,194 + +0.5 1,044,194 + -1.1 1,044,194 + -0.0 1,044,194 + -1.7 1,044,194 + -0.6 1,044,194 + +0.3 1,044,194 + +0.0 1,044,195 - +0.8 1,044,195 - -2.5 1,044,195 - +0.2 1,044,195 - -1.1 1,044,195 - -0.5 1,044,195 - +0.8 1,044,195 - +0.1 1,044,195 - -0.3 1,044,195 - -0.5 1,044,195 - +1.3 1,044,195 - +0.2 1,044,195 - -1.2 1,044,209 + -0.5 1,044,749 - +0.4 1,044,802 + +1.8 1,044,802 + +0.3 1,044,802 + +0.2 1,044,802 + -0.5 1,044,802 + -0.6 1,044,803 - -1.2 1,044,803 - -0.3 1,044,803 - +0.3 1,044,803 - +0.9 1,044,803 - +1.2 1,044,803 - -0.1 1,044,803 - -0.5 1,044,896 - A4249_RS05055 0.18 +1.0 1,044,896 - A4249_RS05055 0.18 +0.3 1,044,896 - A4249_RS05055 0.18 +0.3 1,044,940 + A4249_RS05055 0.25 -0.1 1,044,940 + A4249_RS05055 0.25 -0.2 1,044,940 + A4249_RS05055 0.25 -0.2 1,044,940 + A4249_RS05055 0.25 +0.2 1,044,940 + A4249_RS05055 0.25 -0.7 1,044,941 - A4249_RS05055 0.25 +0.1 1,044,941 - A4249_RS05055 0.25 +0.0 1,044,941 - A4249_RS05055 0.25 -0.5 1,044,941 - A4249_RS05055 0.25 +0.1 1,044,956 + A4249_RS05055 0.28 +1.6 1,044,957 - A4249_RS05055 0.28 -0.1 1,044,957 - A4249_RS05055 0.28 -1.7 1,045,054 + A4249_RS05055 0.44 -0.7
Or see this region's nucleotide sequence