Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04080 and A4249_RS04085 are separated by 59 nucleotides A4249_RS04085 and A4249_RS04090 are separated by 508 nucleotides
A4249_RS04080: A4249_RS04080 - M48 family metalloprotease, at 845,909 to 847,309
_RS04080
A4249_RS04085: A4249_RS04085 - ribonuclease E/G, at 847,369 to 850,071
_RS04085
A4249_RS04090: A4249_RS04090 - N-acetylmuramoyl-L-alanine amidase, at 850,580 to 851,755
_RS04090
Position (kb) 847
848
849
850
851 Strain fitness (log2 ratio) -2
-1
0
1
2 at 846.584 kb on - strand, within A4249_RS04080 at 846.609 kb on + strand, within A4249_RS04080 at 846.610 kb on - strand, within A4249_RS04080 at 846.631 kb on - strand, within A4249_RS04080 at 846.681 kb on + strand, within A4249_RS04080 at 846.682 kb on - strand, within A4249_RS04080 at 846.822 kb on + strand, within A4249_RS04080 at 846.822 kb on + strand, within A4249_RS04080 at 846.822 kb on + strand, within A4249_RS04080 at 846.822 kb on + strand, within A4249_RS04080 at 846.823 kb on - strand, within A4249_RS04080 at 846.823 kb on - strand, within A4249_RS04080 at 846.823 kb on - strand, within A4249_RS04080 at 846.823 kb on - strand, within A4249_RS04080 at 846.850 kb on - strand, within A4249_RS04080 at 846.850 kb on - strand, within A4249_RS04080 at 847.315 kb on + strand at 847.315 kb on + strand at 847.316 kb on - strand at 847.344 kb on - strand at 847.356 kb on + strand at 847.356 kb on + strand at 847.356 kb on + strand at 847.356 kb on + strand at 847.356 kb on + strand at 847.356 kb on + strand at 847.357 kb on - strand at 847.357 kb on - strand at 847.357 kb on - strand at 847.357 kb on - strand at 847.357 kb on - strand at 847.357 kb on - strand at 847.357 kb on - strand at 848.039 kb on + strand, within A4249_RS04085 at 848.039 kb on + strand, within A4249_RS04085 at 848.039 kb on + strand, within A4249_RS04085 at 848.039 kb on + strand, within A4249_RS04085 at 848.040 kb on - strand, within A4249_RS04085 at 848.040 kb on - strand, within A4249_RS04085 at 848.040 kb on - strand, within A4249_RS04085 at 848.040 kb on - strand, within A4249_RS04085 at 848.040 kb on - strand, within A4249_RS04085 at 848.081 kb on + strand, within A4249_RS04085 at 848.081 kb on + strand, within A4249_RS04085 at 848.082 kb on - strand, within A4249_RS04085 at 848.405 kb on + strand, within A4249_RS04085 at 850.239 kb on - strand at 850.239 kb on - strand at 850.239 kb on - strand at 850.332 kb on - strand at 850.332 kb on - strand at 850.332 kb on - strand at 850.332 kb on - strand at 850.422 kb on - strand at 850.422 kb on - strand at 850.422 kb on - strand at 850.422 kb on - strand at 850.442 kb on - strand at 850.469 kb on + strand at 850.469 kb on + strand at 850.470 kb on - strand at 850.470 kb on - strand at 850.498 kb on + strand at 850.498 kb on + strand at 850.498 kb on + strand at 850.498 kb on + strand at 850.498 kb on + strand at 850.499 kb on - strand at 850.499 kb on - strand at 850.499 kb on - strand at 850.499 kb on - strand at 850.504 kb on + strand at 850.505 kb on - strand at 850.505 kb on - strand at 850.505 kb on - strand at 850.505 kb on - strand at 850.838 kb on + strand, within A4249_RS04090 at 850.838 kb on + strand, within A4249_RS04090 at 850.838 kb on + strand, within A4249_RS04090 at 850.838 kb on + strand, within A4249_RS04090 at 850.838 kb on + strand, within A4249_RS04090 at 850.839 kb on - strand, within A4249_RS04090 at 850.839 kb on - strand, within A4249_RS04090 at 850.839 kb on - strand, within A4249_RS04090 at 850.839 kb on - strand, within A4249_RS04090 at 850.839 kb on - strand, within A4249_RS04090 at 850.946 kb on + strand, within A4249_RS04090 at 850.952 kb on + strand, within A4249_RS04090 at 850.952 kb on + strand, within A4249_RS04090 at 850.952 kb on + strand, within A4249_RS04090 at 850.953 kb on - strand, within A4249_RS04090 at 850.953 kb on - strand, within A4249_RS04090 at 850.953 kb on - strand, within A4249_RS04090 at 850.953 kb on - strand, within A4249_RS04090 at 850.953 kb on - strand, within A4249_RS04090 at 850.953 kb on - strand, within A4249_RS04090 at 850.953 kb on - strand, within A4249_RS04090 at 850.953 kb on - strand, within A4249_RS04090 at 850.953 kb on - strand, within A4249_RS04090 at 850.953 kb on - strand, within A4249_RS04090 at 850.953 kb on - strand, within A4249_RS04090 at 850.953 kb on - strand, within A4249_RS04090
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 846,584 - A4249_RS04080 0.48 -0.4 846,609 + A4249_RS04080 0.50 -0.9 846,610 - A4249_RS04080 0.50 -0.4 846,631 - A4249_RS04080 0.52 +0.6 846,681 + A4249_RS04080 0.55 +0.8 846,682 - A4249_RS04080 0.55 +0.9 846,822 + A4249_RS04080 0.65 -0.2 846,822 + A4249_RS04080 0.65 -0.4 846,822 + A4249_RS04080 0.65 -1.2 846,822 + A4249_RS04080 0.65 +1.6 846,823 - A4249_RS04080 0.65 +0.0 846,823 - A4249_RS04080 0.65 +2.4 846,823 - A4249_RS04080 0.65 +0.1 846,823 - A4249_RS04080 0.65 +0.3 846,850 - A4249_RS04080 0.67 +1.6 846,850 - A4249_RS04080 0.67 -0.1 847,315 + -1.4 847,315 + +0.1 847,316 - +0.5 847,344 - +0.2 847,356 + +0.3 847,356 + +0.5 847,356 + -1.3 847,356 + -0.1 847,356 + +0.6 847,356 + -0.2 847,357 - -1.0 847,357 - -0.3 847,357 - -0.5 847,357 - -0.5 847,357 - +0.9 847,357 - -0.1 847,357 - -1.2 848,039 + A4249_RS04085 0.25 -0.9 848,039 + A4249_RS04085 0.25 +0.8 848,039 + A4249_RS04085 0.25 -0.2 848,039 + A4249_RS04085 0.25 -1.5 848,040 - A4249_RS04085 0.25 -0.8 848,040 - A4249_RS04085 0.25 -0.4 848,040 - A4249_RS04085 0.25 -0.7 848,040 - A4249_RS04085 0.25 +1.8 848,040 - A4249_RS04085 0.25 -0.2 848,081 + A4249_RS04085 0.26 -0.2 848,081 + A4249_RS04085 0.26 -1.2 848,082 - A4249_RS04085 0.26 -0.7 848,405 + A4249_RS04085 0.38 +1.8 850,239 - +0.7 850,239 - -2.2 850,239 - +0.4 850,332 - +0.2 850,332 - +0.1 850,332 - +0.2 850,332 - -0.1 850,422 - -0.3 850,422 - +0.8 850,422 - +1.3 850,422 - -0.7 850,442 - -1.1 850,469 + +0.5 850,469 + -1.1 850,470 - -0.5 850,470 - -0.4 850,498 + -0.7 850,498 + +0.4 850,498 + -0.2 850,498 + -0.3 850,498 + +0.1 850,499 - -1.1 850,499 - -0.0 850,499 - +0.0 850,499 - -0.3 850,504 + -0.5 850,505 - -0.3 850,505 - -0.4 850,505 - -0.3 850,505 - -0.4 850,838 + A4249_RS04090 0.22 +1.0 850,838 + A4249_RS04090 0.22 +0.0 850,838 + A4249_RS04090 0.22 -0.2 850,838 + A4249_RS04090 0.22 -0.1 850,838 + A4249_RS04090 0.22 +0.2 850,839 - A4249_RS04090 0.22 +0.4 850,839 - A4249_RS04090 0.22 +0.5 850,839 - A4249_RS04090 0.22 -0.3 850,839 - A4249_RS04090 0.22 -0.3 850,839 - A4249_RS04090 0.22 -0.4 850,946 + A4249_RS04090 0.31 +0.2 850,952 + A4249_RS04090 0.32 -0.3 850,952 + A4249_RS04090 0.32 -0.6 850,952 + A4249_RS04090 0.32 -0.5 850,953 - A4249_RS04090 0.32 -0.5 850,953 - A4249_RS04090 0.32 +0.1 850,953 - A4249_RS04090 0.32 -0.0 850,953 - A4249_RS04090 0.32 -0.8 850,953 - A4249_RS04090 0.32 +0.1 850,953 - A4249_RS04090 0.32 +0.1 850,953 - A4249_RS04090 0.32 -0.1 850,953 - A4249_RS04090 0.32 -0.9 850,953 - A4249_RS04090 0.32 +0.2 850,953 - A4249_RS04090 0.32 -0.8 850,953 - A4249_RS04090 0.32 -0.7 850,953 - A4249_RS04090 0.32 -0.3
Or see this region's nucleotide sequence