Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03230 and A4249_RS03235 are separated by 4 nucleotides A4249_RS03235 and A4249_RS03240 are separated by 29 nucleotides
A4249_RS03230: A4249_RS03230 - copper homeostasis periplasmic binding protein CopC, at 679,354 to 679,716
_RS03230
A4249_RS03235: A4249_RS03235 - copper homeostasis membrane protein CopD, at 679,721 to 680,641
_RS03235
A4249_RS03240: A4249_RS03240 - acyltransferase, at 680,671 to 681,807
_RS03240
Position (kb) 679
680 Strain fitness (log2 ratio) -2
-1
0
1 at 678.362 kb on - strand at 678.440 kb on - strand at 678.551 kb on + strand at 678.551 kb on + strand at 678.552 kb on - strand at 678.559 kb on + strand at 678.559 kb on + strand at 678.559 kb on + strand at 678.560 kb on - strand at 678.560 kb on - strand at 678.560 kb on - strand at 678.560 kb on - strand at 678.560 kb on - strand at 678.609 kb on + strand at 678.609 kb on + strand at 678.609 kb on + strand at 678.609 kb on + strand at 678.610 kb on - strand at 678.610 kb on - strand at 678.610 kb on - strand at 678.610 kb on - strand at 678.610 kb on - strand at 678.610 kb on - strand at 678.746 kb on - strand at 678.855 kb on + strand at 678.896 kb on + strand at 678.897 kb on - strand at 678.897 kb on - strand at 678.903 kb on + strand at 678.903 kb on + strand at 678.945 kb on + strand at 678.946 kb on - strand at 678.962 kb on + strand at 678.962 kb on + strand at 678.962 kb on + strand at 678.962 kb on + strand at 678.962 kb on + strand at 678.962 kb on + strand at 678.963 kb on - strand at 679.001 kb on + strand at 679.001 kb on + strand at 679.058 kb on + strand at 679.058 kb on + strand at 679.059 kb on - strand at 679.059 kb on - strand at 679.059 kb on - strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.211 kb on + strand at 679.211 kb on + strand at 679.212 kb on - strand at 679.212 kb on - strand at 679.317 kb on - strand at 679.317 kb on - strand at 679.317 kb on - strand at 679.326 kb on + strand at 679.326 kb on + strand at 679.326 kb on + strand at 679.327 kb on - strand at 679.327 kb on - strand at 679.327 kb on - strand at 679.327 kb on - strand at 679.327 kb on - strand at 679.327 kb on - strand at 679.327 kb on - strand at 679.342 kb on + strand at 679.342 kb on + strand at 679.342 kb on + strand at 679.343 kb on - strand at 679.343 kb on - strand at 679.343 kb on - strand at 679.642 kb on + strand, within A4249_RS03230 at 679.642 kb on + strand, within A4249_RS03230 at 679.643 kb on - strand, within A4249_RS03230 at 679.757 kb on + strand at 679.757 kb on + strand at 679.757 kb on + strand at 679.757 kb on + strand at 679.757 kb on + strand at 679.757 kb on + strand at 679.758 kb on - strand at 679.758 kb on - strand at 679.758 kb on - strand at 679.964 kb on + strand, within A4249_RS03235 at 679.964 kb on + strand, within A4249_RS03235 at 679.964 kb on + strand, within A4249_RS03235 at 679.964 kb on + strand, within A4249_RS03235 at 679.964 kb on + strand, within A4249_RS03235 at 679.965 kb on - strand, within A4249_RS03235 at 679.965 kb on - strand, within A4249_RS03235 at 679.965 kb on - strand, within A4249_RS03235 at 679.965 kb on - strand, within A4249_RS03235 at 680.360 kb on + strand, within A4249_RS03235 at 680.360 kb on + strand, within A4249_RS03235 at 680.360 kb on + strand, within A4249_RS03235 at 680.361 kb on - strand, within A4249_RS03235 at 680.405 kb on + strand, within A4249_RS03235 at 680.406 kb on - strand, within A4249_RS03235 at 680.415 kb on + strand, within A4249_RS03235 at 680.672 kb on + strand at 680.672 kb on + strand at 680.672 kb on + strand at 680.673 kb on - strand at 680.673 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 678,362 - -0.6 678,440 - -0.8 678,551 + +0.5 678,551 + -1.2 678,552 - +0.7 678,559 + -0.9 678,559 + -0.5 678,559 + +0.2 678,560 - -1.0 678,560 - -0.7 678,560 - +0.1 678,560 - +0.8 678,560 - -1.2 678,609 + +1.1 678,609 + +0.2 678,609 + +1.0 678,609 + -0.9 678,610 - -0.1 678,610 - -0.3 678,610 - -0.0 678,610 - +0.1 678,610 - +0.8 678,610 - +0.4 678,746 - -1.0 678,855 + -0.1 678,896 + -0.4 678,897 - -0.1 678,897 - +0.0 678,903 + -0.4 678,903 + -0.8 678,945 + -0.5 678,946 - -0.9 678,962 + -0.5 678,962 + -0.6 678,962 + -0.7 678,962 + -0.9 678,962 + +0.2 678,962 + +0.4 678,963 - -0.1 679,001 + -0.0 679,001 + +1.1 679,058 + +0.2 679,058 + +0.1 679,059 - -0.5 679,059 - -0.7 679,059 - +0.1 679,168 + +0.7 679,168 + -0.6 679,168 + -0.4 679,168 + -0.1 679,168 + -0.1 679,168 + +0.0 679,168 + +0.0 679,168 + +0.6 679,168 + -0.7 679,168 + +1.3 679,168 + -0.5 679,168 + +0.4 679,168 + -0.9 679,168 + -0.1 679,168 + -0.1 679,168 + -0.7 679,168 + -0.4 679,169 - -0.7 679,169 - +1.2 679,169 - -0.8 679,169 - -0.3 679,169 - -0.7 679,169 - +0.5 679,169 - +0.1 679,169 - +0.3 679,169 - -1.7 679,169 - -0.8 679,169 - -0.3 679,169 - -2.4 679,169 - -0.4 679,169 - +0.2 679,211 + -1.0 679,211 + +0.0 679,212 - -0.2 679,212 - +0.8 679,317 - +0.9 679,317 - -0.5 679,317 - +0.2 679,326 + -1.2 679,326 + +0.6 679,326 + -0.0 679,327 - +0.5 679,327 - +0.3 679,327 - +0.3 679,327 - +0.8 679,327 - +0.0 679,327 - -1.0 679,327 - +0.4 679,342 + -0.1 679,342 + -0.8 679,342 + +1.6 679,343 - +0.7 679,343 - -1.0 679,343 - -0.1 679,642 + A4249_RS03230 0.79 +1.0 679,642 + A4249_RS03230 0.79 +0.2 679,643 - A4249_RS03230 0.80 +0.0 679,757 + -0.2 679,757 + +0.1 679,757 + -0.8 679,757 + -0.1 679,757 + -0.5 679,757 + -0.4 679,758 - +0.5 679,758 - +0.9 679,758 - -0.1 679,964 + A4249_RS03235 0.26 +0.3 679,964 + A4249_RS03235 0.26 -0.4 679,964 + A4249_RS03235 0.26 -0.2 679,964 + A4249_RS03235 0.26 -0.2 679,964 + A4249_RS03235 0.26 +0.2 679,965 - A4249_RS03235 0.26 -0.5 679,965 - A4249_RS03235 0.26 -0.4 679,965 - A4249_RS03235 0.26 -2.0 679,965 - A4249_RS03235 0.26 -1.2 680,360 + A4249_RS03235 0.69 -0.3 680,360 + A4249_RS03235 0.69 -0.5 680,360 + A4249_RS03235 0.69 +0.4 680,361 - A4249_RS03235 0.69 +0.4 680,405 + A4249_RS03235 0.74 +0.6 680,406 - A4249_RS03235 0.74 -0.7 680,415 + A4249_RS03235 0.75 +0.7 680,672 + -0.3 680,672 + +0.3 680,672 + +0.4 680,673 - -0.7 680,673 - +0.1
Or see this region's nucleotide sequence