Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS02745

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS02740 and A4249_RS02745 are separated by 111 nucleotidesA4249_RS02745 and A4249_RS02750 are separated by 84 nucleotidesA4249_RS02750 and A4249_RS02755 are separated by 135 nucleotides A4249_RS02740: A4249_RS02740 - flagellin, at 581,402 to 582,205 _RS02740 A4249_RS02745: A4249_RS02745 - flagellin, at 582,317 to 583,054 _RS02745 A4249_RS02750: A4249_RS02750 - hypothetical protein, at 583,139 to 583,420 _RS02750 A4249_RS02755: A4249_RS02755 - flagellin, at 583,556 to 584,380 _RS02755 Position (kb) 582 583 584Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 581.417 kb on - strandat 581.417 kb on - strandat 581.417 kb on - strandat 581.417 kb on - strandat 581.424 kb on - strandat 581.424 kb on - strandat 581.726 kb on + strand, within A4249_RS02740at 581.726 kb on + strand, within A4249_RS02740at 581.727 kb on - strand, within A4249_RS02740at 581.727 kb on - strand, within A4249_RS02740at 581.855 kb on + strand, within A4249_RS02740at 581.855 kb on + strand, within A4249_RS02740at 581.855 kb on + strand, within A4249_RS02740at 581.856 kb on - strand, within A4249_RS02740at 581.856 kb on - strand, within A4249_RS02740at 581.856 kb on - strand, within A4249_RS02740at 581.908 kb on + strand, within A4249_RS02740at 581.936 kb on + strand, within A4249_RS02740at 581.936 kb on + strand, within A4249_RS02740at 581.936 kb on + strand, within A4249_RS02740at 581.936 kb on + strand, within A4249_RS02740at 581.936 kb on + strand, within A4249_RS02740at 581.936 kb on + strand, within A4249_RS02740at 581.937 kb on - strand, within A4249_RS02740at 581.937 kb on - strand, within A4249_RS02740at 581.937 kb on - strand, within A4249_RS02740at 581.937 kb on - strand, within A4249_RS02740at 581.937 kb on - strand, within A4249_RS02740at 581.937 kb on - strand, within A4249_RS02740at 582.183 kb on + strandat 582.204 kb on - strandat 582.313 kb on - strandat 582.332 kb on - strandat 582.332 kb on - strandat 582.338 kb on + strandat 582.338 kb on + strandat 582.339 kb on - strandat 582.339 kb on - strandat 582.641 kb on + strand, within A4249_RS02745at 582.641 kb on + strand, within A4249_RS02745at 582.642 kb on - strand, within A4249_RS02745at 582.642 kb on - strand, within A4249_RS02745at 582.642 kb on - strand, within A4249_RS02745at 582.653 kb on + strand, within A4249_RS02745at 582.653 kb on + strand, within A4249_RS02745at 582.653 kb on + strand, within A4249_RS02745at 582.654 kb on - strand, within A4249_RS02745at 582.654 kb on - strand, within A4249_RS02745at 582.654 kb on - strand, within A4249_RS02745at 582.654 kb on - strand, within A4249_RS02745at 583.052 kb on + strandat 583.107 kb on + strandat 583.107 kb on + strandat 583.107 kb on + strandat 583.108 kb on - strandat 583.108 kb on - strandat 583.108 kb on - strandat 583.108 kb on - strandat 583.108 kb on - strandat 583.108 kb on - strandat 583.164 kb on + strandat 583.164 kb on + strandat 583.164 kb on + strandat 583.165 kb on - strandat 583.165 kb on - strandat 583.165 kb on - strandat 583.165 kb on - strandat 583.170 kb on + strand, within A4249_RS02750at 583.170 kb on + strand, within A4249_RS02750at 583.170 kb on + strand, within A4249_RS02750at 583.171 kb on - strand, within A4249_RS02750at 583.171 kb on - strand, within A4249_RS02750at 583.171 kb on - strand, within A4249_RS02750at 583.171 kb on - strand, within A4249_RS02750at 583.301 kb on + strand, within A4249_RS02750at 583.301 kb on + strand, within A4249_RS02750at 583.301 kb on + strand, within A4249_RS02750at 583.302 kb on - strand, within A4249_RS02750at 583.302 kb on - strand, within A4249_RS02750at 583.386 kb on - strand, within A4249_RS02750at 583.386 kb on - strand, within A4249_RS02750at 583.446 kb on - strandat 583.504 kb on + strandat 583.505 kb on - strandat 583.518 kb on - strandat 583.774 kb on + strand, within A4249_RS02755at 583.774 kb on + strand, within A4249_RS02755at 583.774 kb on + strand, within A4249_RS02755at 583.774 kb on + strand, within A4249_RS02755at 583.775 kb on - strand, within A4249_RS02755at 583.830 kb on + strand, within A4249_RS02755at 583.831 kb on - strand, within A4249_RS02755at 583.831 kb on - strand, within A4249_RS02755at 583.831 kb on - strand, within A4249_RS02755at 583.889 kb on + strand, within A4249_RS02755at 583.889 kb on + strand, within A4249_RS02755at 583.889 kb on + strand, within A4249_RS02755at 583.889 kb on + strand, within A4249_RS02755at 583.889 kb on + strand, within A4249_RS02755at 583.889 kb on + strand, within A4249_RS02755at 583.890 kb on - strand, within A4249_RS02755at 583.890 kb on - strand, within A4249_RS02755at 583.890 kb on - strand, within A4249_RS02755at 583.890 kb on - strand, within A4249_RS02755at 583.890 kb on - strand, within A4249_RS02755

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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581,417 - +0.3
581,417 - -0.3
581,417 - -0.5
581,417 - +1.1
581,424 - +0.4
581,424 - -1.6
581,726 + A4249_RS02740 0.40 +0.5
581,726 + A4249_RS02740 0.40 +0.2
581,727 - A4249_RS02740 0.40 +0.4
581,727 - A4249_RS02740 0.40 +0.4
581,855 + A4249_RS02740 0.56 +0.3
581,855 + A4249_RS02740 0.56 -0.2
581,855 + A4249_RS02740 0.56 +0.7
581,856 - A4249_RS02740 0.56 -0.1
581,856 - A4249_RS02740 0.56 +0.1
581,856 - A4249_RS02740 0.56 +0.6
581,908 + A4249_RS02740 0.63 -0.1
581,936 + A4249_RS02740 0.66 -0.8
581,936 + A4249_RS02740 0.66 +0.4
581,936 + A4249_RS02740 0.66 -0.1
581,936 + A4249_RS02740 0.66 -0.1
581,936 + A4249_RS02740 0.66 -0.1
581,936 + A4249_RS02740 0.66 -0.4
581,937 - A4249_RS02740 0.67 -0.2
581,937 - A4249_RS02740 0.67 +0.4
581,937 - A4249_RS02740 0.67 +1.5
581,937 - A4249_RS02740 0.67 -2.4
581,937 - A4249_RS02740 0.67 +0.4
581,937 - A4249_RS02740 0.67 +0.2
582,183 + -0.4
582,204 - -2.0
582,313 - -0.4
582,332 - -0.6
582,332 - +0.1
582,338 + -0.0
582,338 + +0.8
582,339 - +0.4
582,339 - +0.9
582,641 + A4249_RS02745 0.44 +0.4
582,641 + A4249_RS02745 0.44 +0.6
582,642 - A4249_RS02745 0.44 +0.9
582,642 - A4249_RS02745 0.44 -0.4
582,642 - A4249_RS02745 0.44 -2.9
582,653 + A4249_RS02745 0.46 -1.0
582,653 + A4249_RS02745 0.46 +0.2
582,653 + A4249_RS02745 0.46 -0.0
582,654 - A4249_RS02745 0.46 +1.0
582,654 - A4249_RS02745 0.46 +0.6
582,654 - A4249_RS02745 0.46 -0.1
582,654 - A4249_RS02745 0.46 -0.7
583,052 + -0.4
583,107 + +1.2
583,107 + +1.1
583,107 + -0.5
583,108 - +0.1
583,108 - -0.1
583,108 - -0.3
583,108 - +0.8
583,108 - +0.0
583,108 - +0.3
583,164 + -0.3
583,164 + +0.1
583,164 + +0.1
583,165 - +0.6
583,165 - +1.6
583,165 - +0.1
583,165 - -0.6
583,170 + A4249_RS02750 0.11 +1.2
583,170 + A4249_RS02750 0.11 +0.4
583,170 + A4249_RS02750 0.11 +0.9
583,171 - A4249_RS02750 0.11 -0.2
583,171 - A4249_RS02750 0.11 -0.3
583,171 - A4249_RS02750 0.11 -0.7
583,171 - A4249_RS02750 0.11 -0.8
583,301 + A4249_RS02750 0.57 -0.5
583,301 + A4249_RS02750 0.57 -0.1
583,301 + A4249_RS02750 0.57 +0.2
583,302 - A4249_RS02750 0.58 -0.3
583,302 - A4249_RS02750 0.58 -0.2
583,386 - A4249_RS02750 0.88 +0.3
583,386 - A4249_RS02750 0.88 -1.2
583,446 - -0.8
583,504 + -1.1
583,505 - -1.0
583,518 - -0.4
583,774 + A4249_RS02755 0.26 -1.3
583,774 + A4249_RS02755 0.26 +1.5
583,774 + A4249_RS02755 0.26 +1.3
583,774 + A4249_RS02755 0.26 -0.2
583,775 - A4249_RS02755 0.27 +0.1
583,830 + A4249_RS02755 0.33 +0.3
583,831 - A4249_RS02755 0.33 -0.7
583,831 - A4249_RS02755 0.33 -1.8
583,831 - A4249_RS02755 0.33 -0.9
583,889 + A4249_RS02755 0.40 +2.2
583,889 + A4249_RS02755 0.40 +0.0
583,889 + A4249_RS02755 0.40 +0.6
583,889 + A4249_RS02755 0.40 +1.8
583,889 + A4249_RS02755 0.40 -0.4
583,889 + A4249_RS02755 0.40 -0.8
583,890 - A4249_RS02755 0.40 -2.2
583,890 - A4249_RS02755 0.40 -2.0
583,890 - A4249_RS02755 0.40 +1.2
583,890 - A4249_RS02755 0.40 -0.5
583,890 - A4249_RS02755 0.40 +0.2

Or see this region's nucleotide sequence