Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS01645 and A4249_RS16720 are separated by 116 nucleotides A4249_RS16720 and A4249_RS01650 are separated by 156 nucleotides A4249_RS01650 and A4249_RS01655 are separated by 75 nucleotides A4249_RS01655 and A4249_RS01660 overlap by 4 nucleotides
A4249_RS01645: A4249_RS01645 - crotonase/enoyl-CoA hydratase family protein, at 314,082 to 314,879
_RS01645
A4249_RS16720: A4249_RS16720 - hypothetical protein, at 314,996 to 315,148
_RS16720
A4249_RS01650: A4249_RS01650 - DUF1289 domain-containing protein, at 315,305 to 315,526
_RS01650
A4249_RS01655: A4249_RS01655 - TIGR02281 family clan AA aspartic protease, at 315,602 to 316,117
_RS01655
A4249_RS01660: A4249_RS01660 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 316,114 to 316,758
_RS01660
Position (kb) 315
316 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 314.407 kb on - strand, within A4249_RS01645 at 314.532 kb on + strand, within A4249_RS01645 at 314.532 kb on + strand, within A4249_RS01645 at 314.532 kb on + strand, within A4249_RS01645 at 314.533 kb on - strand, within A4249_RS01645 at 314.584 kb on + strand, within A4249_RS01645 at 314.584 kb on + strand, within A4249_RS01645 at 314.584 kb on + strand, within A4249_RS01645 at 314.584 kb on + strand, within A4249_RS01645 at 314.585 kb on - strand, within A4249_RS01645 at 314.585 kb on - strand, within A4249_RS01645 at 315.013 kb on + strand, within A4249_RS16720 at 315.013 kb on + strand, within A4249_RS16720 at 315.013 kb on + strand, within A4249_RS16720 at 315.014 kb on - strand, within A4249_RS16720 at 315.014 kb on - strand, within A4249_RS16720 at 315.014 kb on - strand, within A4249_RS16720 at 315.014 kb on - strand, within A4249_RS16720 at 315.014 kb on - strand, within A4249_RS16720 at 315.015 kb on + strand, within A4249_RS16720 at 315.015 kb on + strand, within A4249_RS16720 at 315.015 kb on + strand, within A4249_RS16720 at 315.016 kb on - strand, within A4249_RS16720 at 315.016 kb on - strand, within A4249_RS16720 at 315.016 kb on - strand, within A4249_RS16720 at 315.020 kb on + strand, within A4249_RS16720 at 315.067 kb on + strand, within A4249_RS16720 at 315.067 kb on + strand, within A4249_RS16720 at 315.067 kb on + strand, within A4249_RS16720 at 315.068 kb on - strand, within A4249_RS16720 at 315.068 kb on - strand, within A4249_RS16720 at 315.130 kb on + strand, within A4249_RS16720 at 315.130 kb on + strand, within A4249_RS16720 at 315.192 kb on - strand at 315.235 kb on + strand at 315.237 kb on + strand at 315.237 kb on + strand at 315.237 kb on + strand at 315.237 kb on + strand at 315.238 kb on - strand at 315.264 kb on + strand at 315.265 kb on - strand at 315.416 kb on - strand, within A4249_RS01650 at 315.416 kb on - strand, within A4249_RS01650 at 315.541 kb on + strand at 315.541 kb on + strand at 315.541 kb on + strand at 315.541 kb on + strand at 315.542 kb on - strand at 315.542 kb on - strand at 315.542 kb on - strand at 315.789 kb on - strand, within A4249_RS01655 at 315.806 kb on - strand, within A4249_RS01655 at 315.886 kb on - strand, within A4249_RS01655 at 315.886 kb on - strand, within A4249_RS01655 at 316.037 kb on + strand, within A4249_RS01655 at 316.038 kb on - strand, within A4249_RS01655 at 316.058 kb on + strand, within A4249_RS01655 at 316.058 kb on + strand, within A4249_RS01655 at 316.058 kb on + strand, within A4249_RS01655 at 316.058 kb on + strand, within A4249_RS01655 at 316.058 kb on + strand, within A4249_RS01655 at 316.058 kb on + strand, within A4249_RS01655 at 316.058 kb on + strand, within A4249_RS01655 at 316.059 kb on - strand, within A4249_RS01655 at 316.059 kb on - strand, within A4249_RS01655 at 316.059 kb on - strand, within A4249_RS01655 at 316.059 kb on - strand, within A4249_RS01655 at 316.059 kb on - strand, within A4249_RS01655 at 316.059 kb on - strand, within A4249_RS01655 at 316.059 kb on - strand, within A4249_RS01655 at 316.059 kb on - strand, within A4249_RS01655 at 316.059 kb on - strand, within A4249_RS01655 at 316.059 kb on - strand, within A4249_RS01655 at 316.115 kb on + strand at 316.115 kb on + strand at 316.116 kb on - strand at 316.116 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 314,407 - A4249_RS01645 0.41 -1.6 314,532 + A4249_RS01645 0.56 +0.7 314,532 + A4249_RS01645 0.56 -0.6 314,532 + A4249_RS01645 0.56 -2.8 314,533 - A4249_RS01645 0.57 -0.6 314,584 + A4249_RS01645 0.63 -0.2 314,584 + A4249_RS01645 0.63 +0.7 314,584 + A4249_RS01645 0.63 -1.6 314,584 + A4249_RS01645 0.63 -0.7 314,585 - A4249_RS01645 0.63 -0.4 314,585 - A4249_RS01645 0.63 -0.2 315,013 + A4249_RS16720 0.11 +0.4 315,013 + A4249_RS16720 0.11 +1.0 315,013 + A4249_RS16720 0.11 -0.5 315,014 - A4249_RS16720 0.12 -0.4 315,014 - A4249_RS16720 0.12 +0.1 315,014 - A4249_RS16720 0.12 -0.1 315,014 - A4249_RS16720 0.12 -0.7 315,014 - A4249_RS16720 0.12 +0.0 315,015 + A4249_RS16720 0.12 +0.2 315,015 + A4249_RS16720 0.12 +0.1 315,015 + A4249_RS16720 0.12 +0.1 315,016 - A4249_RS16720 0.13 +0.0 315,016 - A4249_RS16720 0.13 -0.1 315,016 - A4249_RS16720 0.13 -0.1 315,020 + A4249_RS16720 0.16 -0.2 315,067 + A4249_RS16720 0.46 -0.5 315,067 + A4249_RS16720 0.46 -0.4 315,067 + A4249_RS16720 0.46 +0.3 315,068 - A4249_RS16720 0.47 -0.1 315,068 - A4249_RS16720 0.47 -0.3 315,130 + A4249_RS16720 0.88 +0.2 315,130 + A4249_RS16720 0.88 -0.2 315,192 - +0.9 315,235 + +0.0 315,237 + -0.1 315,237 + -0.5 315,237 + -0.4 315,237 + -1.2 315,238 - +0.1 315,264 + +0.2 315,265 - -1.0 315,416 - A4249_RS01650 0.50 -0.2 315,416 - A4249_RS01650 0.50 -0.4 315,541 + +1.2 315,541 + -0.2 315,541 + +0.4 315,541 + -1.9 315,542 - -1.1 315,542 - -2.2 315,542 - -0.4 315,789 - A4249_RS01655 0.36 +0.3 315,806 - A4249_RS01655 0.40 -0.2 315,886 - A4249_RS01655 0.55 -0.6 315,886 - A4249_RS01655 0.55 +0.6 316,037 + A4249_RS01655 0.84 +0.3 316,038 - A4249_RS01655 0.84 -0.7 316,058 + A4249_RS01655 0.88 -1.7 316,058 + A4249_RS01655 0.88 +0.0 316,058 + A4249_RS01655 0.88 -0.5 316,058 + A4249_RS01655 0.88 +0.9 316,058 + A4249_RS01655 0.88 -0.7 316,058 + A4249_RS01655 0.88 -1.2 316,058 + A4249_RS01655 0.88 -0.7 316,059 - A4249_RS01655 0.89 +0.9 316,059 - A4249_RS01655 0.89 -1.0 316,059 - A4249_RS01655 0.89 +0.1 316,059 - A4249_RS01655 0.89 +0.4 316,059 - A4249_RS01655 0.89 -0.0 316,059 - A4249_RS01655 0.89 -0.9 316,059 - A4249_RS01655 0.89 -0.8 316,059 - A4249_RS01655 0.89 +0.4 316,059 - A4249_RS01655 0.89 +0.9 316,059 - A4249_RS01655 0.89 +0.4 316,115 + +0.2 316,115 + +0.6 316,116 - -0.1 316,116 - +1.1
Or see this region's nucleotide sequence