Strain Fitness in Escherichia coli ECRC102 around NIAGMN_26350

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntzntB and ynaN are separated by 13 nucleotidesynaN and dgcM are separated by 193 nucleotides NIAGMN_26345: zntB - zinc transporter ZntB, at 5,128,006 to 5,128,989 zntB NIAGMN_26350: ynaN - Protein YnaN, at 5,129,003 to 5,129,050 ynaN NIAGMN_26355: dgcM - diguanylate cyclase DgcM, at 5,129,244 to 5,130,476 dgcM Position (kb) 5129 5130Strain fitness (log2 ratio) -3 -2 -1 0 1at 5128.132 kb on + strand, within zntBat 5128.257 kb on + strand, within zntBat 5128.409 kb on - strand, within zntBat 5128.664 kb on - strand, within zntBat 5128.851 kb on - strand, within zntBat 5129.129 kb on - strandat 5129.184 kb on - strandat 5129.500 kb on + strand, within dgcMat 5129.654 kb on + strand, within dgcMat 5129.783 kb on + strand, within dgcMat 5129.945 kb on + strand, within dgcMat 5129.945 kb on + strand, within dgcMat 5129.945 kb on + strand, within dgcM

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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5,128,132 + zntB NIAGMN_26345 0.13 -0.2
5,128,257 + zntB NIAGMN_26345 0.26 -1.8
5,128,409 - zntB NIAGMN_26345 0.41 -0.4
5,128,664 - zntB NIAGMN_26345 0.67 +0.7
5,128,851 - zntB NIAGMN_26345 0.86 -0.5
5,129,129 - +0.2
5,129,184 - -0.1
5,129,500 + dgcM NIAGMN_26355 0.21 +0.4
5,129,654 + dgcM NIAGMN_26355 0.33 -0.5
5,129,783 + dgcM NIAGMN_26355 0.44 -1.2
5,129,945 + dgcM NIAGMN_26355 0.57 +0.1
5,129,945 + dgcM NIAGMN_26355 0.57 -3.7
5,129,945 + dgcM NIAGMN_26355 0.57 -0.0

Or see this region's nucleotide sequence