Strain Fitness in Escherichia coli ECRC102 around NIAGMN_24140

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntmurJ and flgN are separated by 39 nucleotidesflgN and flgM are separated by 4 nucleotidesflgM and flgA are separated by 75 nucleotides NIAGMN_24135: murJ - murein biosynthesis integral membrane protein MurJ, at 4,720,725 to 4,722,260 murJ NIAGMN_24140: flgN - flagella biosynthesis chaperone FlgN, at 4,722,300 to 4,722,716 flgN NIAGMN_24145: flgM - anti-sigma-28 factor FlgM, at 4,722,721 to 4,723,014 flgM NIAGMN_24150: flgA - flagellar basal body P-ring formation protein FlgA, at 4,723,090 to 4,723,749 flgA Position (kb) 4722 4723Strain fitness (log2 ratio) -1 0 1at 4722.258 kb on + strandat 4722.258 kb on + strandat 4722.259 kb on - strandat 4722.361 kb on - strand, within flgNat 4723.592 kb on - strand, within flgAat 4723.592 kb on - strand, within flgAat 4723.634 kb on - strand, within flgA

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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4,722,258 + -0.7
4,722,258 + +0.3
4,722,259 - +0.4
4,722,361 - flgN NIAGMN_24140 0.15 +0.1
4,723,592 - flgA NIAGMN_24150 0.76 -1.5
4,723,592 - flgA NIAGMN_24150 0.76 -0.3
4,723,634 - flgA NIAGMN_24150 0.82 -1.0

Or see this region's nucleotide sequence