Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mlaA and NIAGMN_20315 are separated by 394 nucleotides NIAGMN_20315 and fadL are separated by 364 nucleotides
NIAGMN_20310: mlaA - phospholipid-binding lipoprotein MlaA, at 4,010,066 to 4,010,821
mlaA
NIAGMN_20315: NIAGMN_20315 - Uncharacterized protein YfdF, at 4,011,216 to 4,012,247
_20315
NIAGMN_20320: fadL - long-chain fatty acid transporter FadL, at 4,012,612 to 4,013,952
fadL
Position (kb)
4011
4012
4013 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4010.249 kb on + strand, within mlaA at 4010.249 kb on + strand, within mlaA at 4010.467 kb on + strand, within mlaA at 4010.470 kb on + strand, within mlaA at 4010.470 kb on + strand, within mlaA at 4010.470 kb on + strand, within mlaA at 4010.470 kb on + strand, within mlaA at 4010.504 kb on + strand, within mlaA at 4010.514 kb on + strand, within mlaA at 4010.522 kb on + strand, within mlaA at 4010.523 kb on - strand, within mlaA at 4010.614 kb on + strand, within mlaA at 4010.693 kb on + strand, within mlaA at 4010.693 kb on + strand, within mlaA at 4010.695 kb on + strand, within mlaA at 4010.714 kb on + strand, within mlaA at 4010.714 kb on + strand, within mlaA at 4010.889 kb on - strand at 4010.925 kb on - strand at 4012.492 kb on + strand at 4012.566 kb on + strand at 4012.581 kb on - strand at 4012.581 kb on - strand at 4012.623 kb on - strand at 4012.636 kb on - strand at 4012.710 kb on + strand at 4012.711 kb on - strand at 4012.711 kb on - strand at 4012.711 kb on - strand at 4012.712 kb on + strand at 4012.713 kb on - strand at 4012.713 kb on - strand at 4012.713 kb on - strand at 4012.743 kb on + strand at 4012.744 kb on - strand at 4012.747 kb on - strand, within fadL at 4012.755 kb on - strand, within fadL at 4012.804 kb on - strand, within fadL at 4012.867 kb on - strand, within fadL at 4012.878 kb on - strand, within fadL at 4012.881 kb on - strand, within fadL at 4012.881 kb on - strand, within fadL at 4012.881 kb on - strand, within fadL at 4012.881 kb on - strand, within fadL at 4012.881 kb on - strand, within fadL at 4012.905 kb on - strand, within fadL at 4012.915 kb on - strand, within fadL at 4013.007 kb on - strand, within fadL at 4013.082 kb on - strand, within fadL at 4013.129 kb on + strand, within fadL at 4013.134 kb on - strand, within fadL at 4013.134 kb on - strand, within fadL at 4013.163 kb on - strand, within fadL at 4013.163 kb on - strand, within fadL at 4013.163 kb on - strand, within fadL at 4013.218 kb on - strand, within fadL
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 4,010,249 + mlaA NIAGMN_20310 0.24 -0.3 4,010,249 + mlaA NIAGMN_20310 0.24 +0.1 4,010,467 + mlaA NIAGMN_20310 0.53 -0.1 4,010,470 + mlaA NIAGMN_20310 0.53 -2.5 4,010,470 + mlaA NIAGMN_20310 0.53 +0.2 4,010,470 + mlaA NIAGMN_20310 0.53 -0.8 4,010,470 + mlaA NIAGMN_20310 0.53 -0.1 4,010,504 + mlaA NIAGMN_20310 0.58 +0.9 4,010,514 + mlaA NIAGMN_20310 0.59 +0.2 4,010,522 + mlaA NIAGMN_20310 0.60 +0.0 4,010,523 - mlaA NIAGMN_20310 0.60 +0.1 4,010,614 + mlaA NIAGMN_20310 0.72 +0.5 4,010,693 + mlaA NIAGMN_20310 0.83 +0.4 4,010,693 + mlaA NIAGMN_20310 0.83 -0.4 4,010,695 + mlaA NIAGMN_20310 0.83 +1.1 4,010,714 + mlaA NIAGMN_20310 0.86 -0.0 4,010,714 + mlaA NIAGMN_20310 0.86 +0.6 4,010,889 - -0.4 4,010,925 - +0.1 4,012,492 + -0.5 4,012,566 + +0.7 4,012,581 - -0.3 4,012,581 - -0.1 4,012,623 - +0.7 4,012,636 - -0.8 4,012,710 + +0.4 4,012,711 - +0.2 4,012,711 - -0.4 4,012,711 - +0.7 4,012,712 + -0.1 4,012,713 - -0.0 4,012,713 - +0.3 4,012,713 - -0.4 4,012,743 + -0.8 4,012,744 - +1.2 4,012,747 - fadL NIAGMN_20320 0.10 -1.4 4,012,755 - fadL NIAGMN_20320 0.11 +1.3 4,012,804 - fadL NIAGMN_20320 0.14 +0.7 4,012,867 - fadL NIAGMN_20320 0.19 +0.7 4,012,878 - fadL NIAGMN_20320 0.20 +0.1 4,012,881 - fadL NIAGMN_20320 0.20 -0.1 4,012,881 - fadL NIAGMN_20320 0.20 -1.3 4,012,881 - fadL NIAGMN_20320 0.20 +1.9 4,012,881 - fadL NIAGMN_20320 0.20 +0.2 4,012,881 - fadL NIAGMN_20320 0.20 +0.3 4,012,905 - fadL NIAGMN_20320 0.22 +1.4 4,012,915 - fadL NIAGMN_20320 0.23 -0.2 4,013,007 - fadL NIAGMN_20320 0.29 +0.2 4,013,082 - fadL NIAGMN_20320 0.35 -0.2 4,013,129 + fadL NIAGMN_20320 0.39 +0.7 4,013,134 - fadL NIAGMN_20320 0.39 -1.6 4,013,134 - fadL NIAGMN_20320 0.39 -1.8 4,013,163 - fadL NIAGMN_20320 0.41 -1.2 4,013,163 - fadL NIAGMN_20320 0.41 +1.8 4,013,163 - fadL NIAGMN_20320 0.41 -1.6 4,013,218 - fadL NIAGMN_20320 0.45 -0.4
Or see this region's nucleotide sequence