Strain Fitness in Escherichia coli ECRC102 around NIAGMN_18295

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
3,617,364	+	ecdD	NIAGMN_18285	0.31	-0.0
3,617,364	+	ecdD	NIAGMN_18285	0.31	+0.7
3,617,366	+	ecdD	NIAGMN_18285	0.32	-0.4
3,617,366	+	ecdD	NIAGMN_18285	0.32	+0.4
3,617,366	+	ecdD	NIAGMN_18285	0.32	+0.2
3,617,366	+	ecdD	NIAGMN_18285	0.32	+0.3
3,617,389	+	ecdD	NIAGMN_18285	0.41	-0.9
3,617,389	+	ecdD	NIAGMN_18285	0.41	+1.1
3,617,467	+	ecdD	NIAGMN_18285	0.74	-0.6
3,617,622	-				-1.9
3,617,664	-	pphB	NIAGMN_18290	0.15	+0.3
3,617,948	+	pphB	NIAGMN_18290	0.58	+0.0
3,617,948	+	pphB	NIAGMN_18290	0.58	-1.5
3,618,086	+	pphB	NIAGMN_18290	0.79	+0.2
3,618,123	+	pphB	NIAGMN_18290	0.84	-0.8
3,618,257	+				+0.9
3,618,353	-				-0.4
3,618,534	-				-1.4
3,618,536	+				+0.2
3,618,611	+	mutS	NIAGMN_18295	0.11	-2.4
3,618,612	-	mutS	NIAGMN_18295	0.11	-1.3
3,618,618	-	mutS	NIAGMN_18295	0.11	-0.6
3,618,618	-	mutS	NIAGMN_18295	0.11	-0.7
3,618,618	-	mutS	NIAGMN_18295	0.11	+0.7
3,618,707	-	mutS	NIAGMN_18295	0.15	+0.9
3,618,735	-	mutS	NIAGMN_18295	0.16	+0.0
3,618,787	+	mutS	NIAGMN_18295	0.18	-0.3
3,618,787	+	mutS	NIAGMN_18295	0.18	+0.4
3,618,788	-	mutS	NIAGMN_18295	0.18	+0.4
3,618,788	-	mutS	NIAGMN_18295	0.18	-0.3
3,618,833	-	mutS	NIAGMN_18295	0.20	+1.0
3,618,855	-	mutS	NIAGMN_18295	0.20	-1.0
3,618,976	+	mutS	NIAGMN_18295	0.25	+0.5
3,618,976	+	mutS	NIAGMN_18295	0.25	-0.2
3,618,977	-	mutS	NIAGMN_18295	0.25	+0.4
3,618,977	-	mutS	NIAGMN_18295	0.25	-0.6
3,618,977	-	mutS	NIAGMN_18295	0.25	+0.9
3,618,977	-	mutS	NIAGMN_18295	0.25	-0.2
3,618,988	+	mutS	NIAGMN_18295	0.26	+0.6
3,618,988	+	mutS	NIAGMN_18295	0.26	-1.6
3,618,989	-	mutS	NIAGMN_18295	0.26	+0.0
3,619,022	+	mutS	NIAGMN_18295	0.27	-0.4
3,619,023	-	mutS	NIAGMN_18295	0.27	+0.1
3,619,023	-	mutS	NIAGMN_18295	0.27	+0.7
3,619,023	-	mutS	NIAGMN_18295	0.27	-0.1
3,619,024	+	mutS	NIAGMN_18295	0.27	+0.5
3,619,024	+	mutS	NIAGMN_18295	0.27	-0.5
3,619,024	+	mutS	NIAGMN_18295	0.27	+0.4
3,619,024	+	mutS	NIAGMN_18295	0.27	+1.0
3,619,024	+	mutS	NIAGMN_18295	0.27	-1.4
3,619,024	+	mutS	NIAGMN_18295	0.27	-0.2
3,619,024	+	mutS	NIAGMN_18295	0.27	-0.5
3,619,025	-	mutS	NIAGMN_18295	0.27	-0.7
3,619,025	-	mutS	NIAGMN_18295	0.27	+0.0
3,619,025	-	mutS	NIAGMN_18295	0.27	-0.4
3,619,025	-	mutS	NIAGMN_18295	0.27	-0.1
3,619,025	-	mutS	NIAGMN_18295	0.27	+0.5
3,619,025	-	mutS	NIAGMN_18295	0.27	-0.3
3,619,025	-	mutS	NIAGMN_18295	0.27	+0.8
3,619,025	-	mutS	NIAGMN_18295	0.27	-1.2
3,619,025	-	mutS	NIAGMN_18295	0.27	-0.2
3,619,025	-	mutS	NIAGMN_18295	0.27	-0.8
3,619,025	-	mutS	NIAGMN_18295	0.27	-0.3
3,619,029	-	mutS	NIAGMN_18295	0.27	+0.2
3,619,059	-	mutS	NIAGMN_18295	0.28	+0.0
3,619,104	-	mutS	NIAGMN_18295	0.30	+1.0
3,619,170	-	mutS	NIAGMN_18295	0.33	-1.2
3,619,192	+	mutS	NIAGMN_18295	0.34	+1.3
3,619,193	-	mutS	NIAGMN_18295	0.34	+0.6
3,619,204	+	mutS	NIAGMN_18295	0.34	-0.5
3,619,205	-	mutS	NIAGMN_18295	0.34	-1.6
3,619,205	-	mutS	NIAGMN_18295	0.34	-0.2
3,619,310	-	mutS	NIAGMN_18295	0.38	-0.5
3,619,367	-	mutS	NIAGMN_18295	0.40	-0.3
3,619,390	+	mutS	NIAGMN_18295	0.41	-0.6
3,619,391	-	mutS	NIAGMN_18295	0.41	-0.6
3,619,424	+	mutS	NIAGMN_18295	0.43	+0.3
3,619,424	+	mutS	NIAGMN_18295	0.43	+0.4
3,619,425	-	mutS	NIAGMN_18295	0.43	-0.2
3,619,426	+	mutS	NIAGMN_18295	0.43	-1.5
3,619,426	+	mutS	NIAGMN_18295	0.43	-1.2
3,619,426	+	mutS	NIAGMN_18295	0.43	-0.5
3,619,426	+	mutS	NIAGMN_18295	0.43	-1.4
3,619,426	+	mutS	NIAGMN_18295	0.43	+0.4
3,619,426	+	mutS	NIAGMN_18295	0.43	-0.4
3,619,427	-	mutS	NIAGMN_18295	0.43	-0.8
3,619,427	-	mutS	NIAGMN_18295	0.43	-0.7
3,619,427	-	mutS	NIAGMN_18295	0.43	-0.8
3,619,427	-	mutS	NIAGMN_18295	0.43	-1.2
3,619,427	-	mutS	NIAGMN_18295	0.43	+2.3
3,619,427	-	mutS	NIAGMN_18295	0.43	+0.8
3,619,434	-	mutS	NIAGMN_18295	0.43	+0.2
3,619,434	-	mutS	NIAGMN_18295	0.43	-0.2
3,619,434	-	mutS	NIAGMN_18295	0.43	+0.9
3,619,434	-	mutS	NIAGMN_18295	0.43	-0.9
3,619,434	-	mutS	NIAGMN_18295	0.43	-1.0
3,619,434	-	mutS	NIAGMN_18295	0.43	-0.7
3,619,472	-	mutS	NIAGMN_18295	0.45	-1.1
3,619,472	-	mutS	NIAGMN_18295	0.45	+1.2
3,619,491	-	mutS	NIAGMN_18295	0.45	+0.1
3,619,520	+	mutS	NIAGMN_18295	0.46	+0.5
3,619,555	+	mutS	NIAGMN_18295	0.48	-0.6
3,619,605	-	mutS	NIAGMN_18295	0.50	+0.3
3,619,606	+	mutS	NIAGMN_18295	0.50	-0.4
3,619,606	+	mutS	NIAGMN_18295	0.50	-0.8
3,619,607	-	mutS	NIAGMN_18295	0.50	+0.7
3,619,723	-	mutS	NIAGMN_18295	0.54	+0.6
3,619,734	-	mutS	NIAGMN_18295	0.55	+0.1
3,619,747	-	mutS	NIAGMN_18295	0.55	-0.9
3,619,841	+	mutS	NIAGMN_18295	0.59	-1.2
3,619,841	+	mutS	NIAGMN_18295	0.59	+1.0
3,619,842	-	mutS	NIAGMN_18295	0.59	-0.9
3,619,842	-	mutS	NIAGMN_18295	0.59	+0.1
3,619,866	+	mutS	NIAGMN_18295	0.60	-0.7
3,619,867	-	mutS	NIAGMN_18295	0.60	+0.3
3,619,867	-	mutS	NIAGMN_18295	0.60	-0.3
3,619,869	+	mutS	NIAGMN_18295	0.60	-0.5
3,619,870	-	mutS	NIAGMN_18295	0.60	+0.5
3,619,910	+	mutS	NIAGMN_18295	0.62	-2.8
3,620,088	-	mutS	NIAGMN_18295	0.69	-0.8
3,620,129	+	mutS	NIAGMN_18295	0.70	-0.2
3,620,130	-	mutS	NIAGMN_18295	0.70	-0.3
3,620,130	-	mutS	NIAGMN_18295	0.70	-0.8
3,620,144	+	mutS	NIAGMN_18295	0.71	-0.1
3,620,144	+	mutS	NIAGMN_18295	0.71	+0.4
3,620,153	+	mutS	NIAGMN_18295	0.71	-1.8
3,620,153	+	mutS	NIAGMN_18295	0.71	+0.0
3,620,354	-	mutS	NIAGMN_18295	0.79	+0.2
3,620,656	+				+0.1
3,620,736	-				+0.2
3,620,843	-				-0.6
3,620,843	-				+0.4
3,620,918	-				-0.6
3,620,918	-				+0.2
3,620,918	-				-0.1
3,620,949	+				+0.5
3,620,950	-				-0.1
3,620,958	-				+0.1
3,621,065	+		NIAGMN_18300	0.73	+0.4
3,621,065	+		NIAGMN_18300	0.73	+0.2
3,621,065	+		NIAGMN_18300	0.73	+0.4
3,621,065	+		NIAGMN_18300	0.73	-0.8
3,621,065	+		NIAGMN_18300	0.73	-0.4
3,621,066	-		NIAGMN_18300	0.73	-0.2
3,621,066	-		NIAGMN_18300	0.73	-0.9
3,621,066	-		NIAGMN_18300	0.73	+1.3
3,621,076	+		NIAGMN_18300	0.81	-0.2
3,621,121	+				-0.3
3,621,121	+				-0.5
3,621,131	+				+0.6
3,621,177	+				+0.3
3,621,177	+				+0.2
3,621,178	-				+0.3
3,621,178	-				+0.1
3,621,192	+				+0.7
3,621,192	+				-0.2
3,621,315	+	ygbA	NIAGMN_18305	0.39	-0.5
3,621,349	-	ygbA	NIAGMN_18305	0.48	+0.6
3,621,371	-	ygbA	NIAGMN_18305	0.55	+0.5
3,621,405	+	ygbA	NIAGMN_18305	0.64	+0.5
3,621,406	-	ygbA	NIAGMN_18305	0.64	+0.2
3,621,450	-	ygbA	NIAGMN_18305	0.77	+0.4
3,621,529	+				-0.4
3,621,529	+				+0.1
3,621,529	+				-0.6
3,621,530	-				+0.2
3,621,657	+				-0.6
3,621,658	-				+0.8
3,621,658	-				+0.9
3,621,710	+				-0.2
3,621,710	+				-0.9
3,621,777	+	flhA	NIAGMN_18310	0.10	-0.2
3,621,778	-	flhA	NIAGMN_18310	0.10	-0.1
3,621,778	-	flhA	NIAGMN_18310	0.10	-0.2
3,621,853	+	flhA	NIAGMN_18310	0.14	+0.5
3,621,853	+	flhA	NIAGMN_18310	0.14	+0.9
3,621,854	-	flhA	NIAGMN_18310	0.14	-0.6
3,621,873	+	flhA	NIAGMN_18310	0.15	-0.5