Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yhiM and NIAGMN_14225 are separated by 383 nucleotides NIAGMN_14225 and yhiJ are separated by 261 nucleotides
NIAGMN_14220: yhiM - Inner membrane protein YhiM, at 2,831,357 to 2,832,409
yhiM
NIAGMN_14225: NIAGMN_14225 - DUF4049 domain-containing protein, at 2,832,793 to 2,834,403
_14225
NIAGMN_14230: yhiJ - Uncharacterized protein YhiJ, at 2,834,665 to 2,836,287
yhiJ
Position (kb)
2832
2833
2834
2835 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2831.801 kb on + strand, within yhiM at 2831.801 kb on + strand, within yhiM at 2831.834 kb on + strand, within yhiM at 2831.834 kb on + strand, within yhiM at 2831.834 kb on + strand, within yhiM at 2831.835 kb on - strand, within yhiM at 2831.835 kb on - strand, within yhiM at 2831.835 kb on - strand, within yhiM at 2831.851 kb on - strand, within yhiM at 2831.851 kb on - strand, within yhiM at 2831.851 kb on - strand, within yhiM at 2831.851 kb on - strand, within yhiM at 2831.851 kb on - strand, within yhiM at 2831.862 kb on - strand, within yhiM at 2831.872 kb on + strand, within yhiM at 2831.872 kb on + strand, within yhiM at 2831.872 kb on + strand, within yhiM at 2831.873 kb on - strand, within yhiM at 2831.876 kb on + strand, within yhiM at 2831.876 kb on + strand, within yhiM at 2831.877 kb on - strand, within yhiM at 2831.877 kb on - strand, within yhiM at 2831.877 kb on - strand, within yhiM at 2831.877 kb on - strand, within yhiM at 2831.884 kb on + strand, within yhiM at 2831.884 kb on + strand, within yhiM at 2831.884 kb on + strand, within yhiM at 2831.884 kb on + strand, within yhiM at 2831.885 kb on - strand, within yhiM at 2831.885 kb on - strand, within yhiM at 2831.885 kb on - strand, within yhiM at 2831.887 kb on + strand, within yhiM at 2831.887 kb on + strand, within yhiM at 2831.915 kb on + strand, within yhiM at 2831.916 kb on - strand, within yhiM at 2831.942 kb on - strand, within yhiM at 2831.958 kb on + strand, within yhiM at 2831.958 kb on + strand, within yhiM at 2831.958 kb on + strand, within yhiM at 2831.959 kb on - strand, within yhiM at 2831.959 kb on - strand, within yhiM at 2832.048 kb on - strand, within yhiM at 2832.118 kb on + strand, within yhiM at 2832.118 kb on + strand, within yhiM at 2832.119 kb on - strand, within yhiM at 2832.119 kb on - strand, within yhiM at 2832.119 kb on - strand, within yhiM at 2832.119 kb on - strand, within yhiM at 2832.125 kb on + strand, within yhiM at 2832.155 kb on - strand, within yhiM at 2832.191 kb on - strand, within yhiM at 2832.195 kb on + strand, within yhiM at 2832.203 kb on - strand, within yhiM at 2832.203 kb on - strand, within yhiM at 2832.252 kb on - strand, within yhiM at 2832.263 kb on + strand, within yhiM at 2832.264 kb on - strand, within yhiM at 2832.342 kb on - strand at 2832.342 kb on - strand at 2832.377 kb on + strand at 2832.399 kb on + strand at 2832.400 kb on - strand at 2832.400 kb on - strand at 2832.402 kb on - strand at 2832.426 kb on - strand at 2832.588 kb on + strand at 2833.095 kb on + strand, within NIAGMN_14225 at 2833.284 kb on + strand, within NIAGMN_14225 at 2833.460 kb on + strand, within NIAGMN_14225 at 2833.470 kb on - strand, within NIAGMN_14225 at 2833.500 kb on - strand, within NIAGMN_14225 at 2833.681 kb on - strand, within NIAGMN_14225 at 2833.699 kb on - strand, within NIAGMN_14225 at 2833.845 kb on + strand, within NIAGMN_14225 at 2833.895 kb on - strand, within NIAGMN_14225 at 2834.067 kb on - strand, within NIAGMN_14225 at 2834.067 kb on - strand, within NIAGMN_14225 at 2834.118 kb on + strand, within NIAGMN_14225 at 2834.147 kb on + strand, within NIAGMN_14225 at 2834.148 kb on - strand, within NIAGMN_14225 at 2834.167 kb on - strand, within NIAGMN_14225 at 2834.199 kb on + strand, within NIAGMN_14225 at 2834.381 kb on + strand at 2834.423 kb on + strand at 2834.425 kb on + strand at 2834.434 kb on - strand at 2834.472 kb on + strand at 2834.482 kb on + strand at 2834.630 kb on - strand at 2834.651 kb on - strand at 2834.651 kb on - strand at 2834.688 kb on + strand at 2834.701 kb on - strand at 2834.742 kb on + strand at 2834.797 kb on - strand at 2834.934 kb on + strand, within yhiJ at 2835.263 kb on - strand, within yhiJ
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,831,801 + yhiM NIAGMN_14220 0.42 +0.4 2,831,801 + yhiM NIAGMN_14220 0.42 -0.2 2,831,834 + yhiM NIAGMN_14220 0.45 -1.0 2,831,834 + yhiM NIAGMN_14220 0.45 -1.8 2,831,834 + yhiM NIAGMN_14220 0.45 -0.4 2,831,835 - yhiM NIAGMN_14220 0.45 +0.2 2,831,835 - yhiM NIAGMN_14220 0.45 -1.5 2,831,835 - yhiM NIAGMN_14220 0.45 +1.5 2,831,851 - yhiM NIAGMN_14220 0.47 +0.0 2,831,851 - yhiM NIAGMN_14220 0.47 -0.3 2,831,851 - yhiM NIAGMN_14220 0.47 -0.7 2,831,851 - yhiM NIAGMN_14220 0.47 +0.3 2,831,851 - yhiM NIAGMN_14220 0.47 -0.1 2,831,862 - yhiM NIAGMN_14220 0.48 +0.1 2,831,872 + yhiM NIAGMN_14220 0.49 +0.7 2,831,872 + yhiM NIAGMN_14220 0.49 +0.0 2,831,872 + yhiM NIAGMN_14220 0.49 -0.2 2,831,873 - yhiM NIAGMN_14220 0.49 +0.1 2,831,876 + yhiM NIAGMN_14220 0.49 -0.6 2,831,876 + yhiM NIAGMN_14220 0.49 -0.8 2,831,877 - yhiM NIAGMN_14220 0.49 +0.4 2,831,877 - yhiM NIAGMN_14220 0.49 -1.3 2,831,877 - yhiM NIAGMN_14220 0.49 +0.5 2,831,877 - yhiM NIAGMN_14220 0.49 +0.6 2,831,884 + yhiM NIAGMN_14220 0.50 -0.2 2,831,884 + yhiM NIAGMN_14220 0.50 -0.8 2,831,884 + yhiM NIAGMN_14220 0.50 -1.5 2,831,884 + yhiM NIAGMN_14220 0.50 -1.0 2,831,885 - yhiM NIAGMN_14220 0.50 -0.7 2,831,885 - yhiM NIAGMN_14220 0.50 +1.3 2,831,885 - yhiM NIAGMN_14220 0.50 +0.6 2,831,887 + yhiM NIAGMN_14220 0.50 +0.0 2,831,887 + yhiM NIAGMN_14220 0.50 -0.8 2,831,915 + yhiM NIAGMN_14220 0.53 -0.1 2,831,916 - yhiM NIAGMN_14220 0.53 -0.6 2,831,942 - yhiM NIAGMN_14220 0.56 -0.6 2,831,958 + yhiM NIAGMN_14220 0.57 -0.0 2,831,958 + yhiM NIAGMN_14220 0.57 -1.4 2,831,958 + yhiM NIAGMN_14220 0.57 +0.8 2,831,959 - yhiM NIAGMN_14220 0.57 -1.7 2,831,959 - yhiM NIAGMN_14220 0.57 +0.6 2,832,048 - yhiM NIAGMN_14220 0.66 +0.6 2,832,118 + yhiM NIAGMN_14220 0.72 -1.0 2,832,118 + yhiM NIAGMN_14220 0.72 +0.9 2,832,119 - yhiM NIAGMN_14220 0.72 -0.6 2,832,119 - yhiM NIAGMN_14220 0.72 -0.0 2,832,119 - yhiM NIAGMN_14220 0.72 -0.0 2,832,119 - yhiM NIAGMN_14220 0.72 +0.3 2,832,125 + yhiM NIAGMN_14220 0.73 -0.2 2,832,155 - yhiM NIAGMN_14220 0.76 +0.0 2,832,191 - yhiM NIAGMN_14220 0.79 -0.8 2,832,195 + yhiM NIAGMN_14220 0.80 +0.3 2,832,203 - yhiM NIAGMN_14220 0.80 +0.1 2,832,203 - yhiM NIAGMN_14220 0.80 +0.4 2,832,252 - yhiM NIAGMN_14220 0.85 -0.8 2,832,263 + yhiM NIAGMN_14220 0.86 -1.5 2,832,264 - yhiM NIAGMN_14220 0.86 -0.2 2,832,342 - +0.5 2,832,342 - +0.0 2,832,377 + +0.3 2,832,399 + -0.0 2,832,400 - +0.9 2,832,400 - -0.6 2,832,402 - -0.8 2,832,426 - +0.4 2,832,588 + -0.3 2,833,095 + NIAGMN_14225 0.19 +0.6 2,833,284 + NIAGMN_14225 0.30 +0.2 2,833,460 + NIAGMN_14225 0.41 -1.2 2,833,470 - NIAGMN_14225 0.42 -1.2 2,833,500 - NIAGMN_14225 0.44 -0.2 2,833,681 - NIAGMN_14225 0.55 -0.8 2,833,699 - NIAGMN_14225 0.56 +0.5 2,833,845 + NIAGMN_14225 0.65 +0.5 2,833,895 - NIAGMN_14225 0.68 +1.3 2,834,067 - NIAGMN_14225 0.79 -3.2 2,834,067 - NIAGMN_14225 0.79 +1.3 2,834,118 + NIAGMN_14225 0.82 -0.7 2,834,147 + NIAGMN_14225 0.84 +0.1 2,834,148 - NIAGMN_14225 0.84 -0.7 2,834,167 - NIAGMN_14225 0.85 -0.1 2,834,199 + NIAGMN_14225 0.87 +0.7 2,834,381 + +0.4 2,834,423 + +0.8 2,834,425 + +1.0 2,834,434 - -0.2 2,834,472 + -0.3 2,834,482 + -0.1 2,834,630 - +0.7 2,834,651 - +0.9 2,834,651 - -0.4 2,834,688 + +0.2 2,834,701 - -0.6 2,834,742 + +0.8 2,834,797 - +0.5 2,834,934 + yhiJ NIAGMN_14230 0.17 -0.3 2,835,263 - yhiJ NIAGMN_14230 0.37 -0.2
Or see this region's nucleotide sequence