Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ilvG and NIAGMN_12415 are separated by 346 nucleotides NIAGMN_12415 and yifB are separated by 154 nucleotides
NIAGMN_12410: ilvG - acetolactate synthase 2 catalytic subunit, at 2,456,081 to 2,457,727
ilvG
NIAGMN_12415: NIAGMN_12415 - hypothetical protein, at 2,458,074 to 2,458,163
_12415
NIAGMN_12420: yifB - YifB family Mg chelatase-like AAA ATPase, at 2,458,318 to 2,459,838
yifB
Position (kb)
2458
2459 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2457.081 kb on - strand, within ilvG at 2457.123 kb on + strand, within ilvG at 2457.123 kb on + strand, within ilvG at 2457.123 kb on + strand, within ilvG at 2457.123 kb on + strand, within ilvG at 2457.123 kb on + strand, within ilvG at 2457.123 kb on + strand, within ilvG at 2457.123 kb on + strand, within ilvG at 2457.123 kb on + strand, within ilvG at 2457.124 kb on - strand, within ilvG at 2457.124 kb on - strand, within ilvG at 2457.124 kb on - strand, within ilvG at 2457.124 kb on - strand, within ilvG at 2457.124 kb on - strand, within ilvG at 2457.124 kb on - strand, within ilvG at 2457.124 kb on - strand, within ilvG at 2457.124 kb on - strand, within ilvG at 2457.247 kb on + strand, within ilvG at 2457.247 kb on + strand, within ilvG at 2457.247 kb on + strand, within ilvG at 2457.316 kb on + strand, within ilvG at 2457.364 kb on + strand, within ilvG at 2457.364 kb on + strand, within ilvG at 2457.460 kb on + strand, within ilvG at 2457.461 kb on - strand, within ilvG at 2457.461 kb on - strand, within ilvG at 2457.461 kb on - strand, within ilvG at 2457.467 kb on + strand, within ilvG at 2457.526 kb on + strand, within ilvG at 2457.526 kb on + strand, within ilvG at 2457.527 kb on - strand, within ilvG at 2457.530 kb on + strand, within ilvG at 2457.530 kb on + strand, within ilvG at 2457.530 kb on + strand, within ilvG at 2457.530 kb on + strand, within ilvG at 2457.530 kb on + strand, within ilvG at 2457.530 kb on + strand, within ilvG at 2457.530 kb on + strand, within ilvG at 2457.531 kb on - strand, within ilvG at 2457.531 kb on - strand, within ilvG at 2457.531 kb on - strand, within ilvG at 2457.531 kb on - strand, within ilvG at 2457.531 kb on - strand, within ilvG at 2457.531 kb on - strand, within ilvG at 2457.624 kb on + strand at 2457.624 kb on + strand at 2457.624 kb on + strand at 2457.625 kb on - strand at 2457.625 kb on - strand at 2457.636 kb on + strand at 2457.637 kb on - strand at 2457.637 kb on - strand at 2457.646 kb on + strand at 2457.646 kb on + strand at 2457.646 kb on + strand at 2457.646 kb on + strand at 2457.647 kb on - strand at 2457.647 kb on - strand at 2457.647 kb on - strand at 2457.704 kb on + strand at 2457.704 kb on + strand at 2457.704 kb on + strand at 2457.704 kb on + strand at 2457.704 kb on + strand at 2457.704 kb on + strand at 2457.704 kb on + strand at 2457.704 kb on + strand at 2457.705 kb on - strand at 2457.705 kb on - strand at 2457.705 kb on - strand at 2457.705 kb on - strand at 2457.727 kb on + strand at 2457.727 kb on + strand at 2457.727 kb on + strand at 2457.727 kb on + strand at 2457.728 kb on - strand at 2457.728 kb on - strand at 2457.728 kb on - strand at 2457.728 kb on - strand at 2457.731 kb on + strand at 2457.731 kb on + strand at 2457.731 kb on + strand at 2457.732 kb on - strand at 2457.732 kb on - strand at 2457.732 kb on - strand at 2457.774 kb on + strand at 2457.804 kb on + strand at 2457.846 kb on + strand at 2457.847 kb on - strand at 2457.847 kb on - strand at 2457.847 kb on - strand at 2457.847 kb on - strand at 2457.869 kb on - strand at 2457.951 kb on + strand at 2457.951 kb on + strand at 2457.952 kb on - strand at 2458.014 kb on + strand at 2458.038 kb on - strand at 2458.156 kb on + strand at 2458.156 kb on + strand at 2458.282 kb on + strand at 2458.282 kb on + strand at 2458.287 kb on + strand at 2458.287 kb on + strand at 2458.287 kb on + strand at 2458.288 kb on - strand at 2458.288 kb on - strand at 2458.295 kb on + strand at 2458.295 kb on + strand at 2458.295 kb on + strand at 2458.296 kb on - strand at 2458.296 kb on - strand at 2458.296 kb on - strand at 2458.317 kb on + strand at 2458.317 kb on + strand at 2458.317 kb on + strand at 2458.318 kb on - strand at 2458.318 kb on - strand at 2458.318 kb on - strand at 2458.339 kb on - strand at 2458.358 kb on + strand at 2458.358 kb on + strand at 2458.359 kb on - strand at 2458.385 kb on + strand at 2458.385 kb on + strand at 2458.385 kb on + strand at 2458.385 kb on + strand at 2458.385 kb on + strand at 2458.385 kb on + strand at 2458.385 kb on + strand at 2458.386 kb on - strand at 2458.386 kb on - strand at 2458.386 kb on - strand at 2458.386 kb on - strand at 2458.386 kb on - strand at 2458.386 kb on - strand at 2458.386 kb on - strand at 2458.386 kb on - strand at 2458.389 kb on + strand at 2458.389 kb on + strand at 2458.389 kb on + strand at 2458.390 kb on - strand at 2458.390 kb on - strand at 2458.390 kb on - strand at 2458.390 kb on - strand at 2458.390 kb on - strand at 2458.390 kb on - strand at 2458.390 kb on - strand at 2458.390 kb on - strand at 2458.390 kb on - strand at 2458.395 kb on + strand at 2458.413 kb on - strand at 2458.413 kb on - strand at 2458.477 kb on - strand, within yifB at 2458.495 kb on + strand, within yifB at 2458.518 kb on + strand, within yifB at 2458.519 kb on - strand, within yifB at 2458.538 kb on + strand, within yifB at 2458.538 kb on + strand, within yifB at 2458.539 kb on - strand, within yifB at 2458.559 kb on - strand, within yifB at 2458.559 kb on - strand, within yifB at 2458.565 kb on + strand, within yifB at 2458.565 kb on + strand, within yifB at 2458.565 kb on + strand, within yifB at 2458.566 kb on - strand, within yifB at 2458.566 kb on - strand, within yifB at 2458.566 kb on - strand, within yifB at 2458.566 kb on - strand, within yifB at 2458.605 kb on + strand, within yifB at 2458.606 kb on - strand, within yifB at 2458.606 kb on - strand, within yifB at 2458.606 kb on - strand, within yifB at 2458.619 kb on + strand, within yifB at 2458.619 kb on + strand, within yifB at 2458.620 kb on - strand, within yifB at 2458.627 kb on + strand, within yifB at 2458.628 kb on - strand, within yifB at 2458.628 kb on - strand, within yifB at 2458.635 kb on - strand, within yifB at 2458.635 kb on - strand, within yifB at 2458.635 kb on - strand, within yifB at 2458.653 kb on + strand, within yifB at 2458.653 kb on + strand, within yifB at 2458.704 kb on + strand, within yifB at 2458.705 kb on - strand, within yifB at 2458.705 kb on - strand, within yifB at 2458.705 kb on - strand, within yifB at 2458.707 kb on + strand, within yifB at 2458.708 kb on - strand, within yifB at 2458.708 kb on - strand, within yifB at 2458.741 kb on - strand, within yifB at 2458.760 kb on + strand, within yifB at 2458.764 kb on + strand, within yifB at 2458.765 kb on - strand, within yifB at 2458.824 kb on + strand, within yifB at 2458.824 kb on + strand, within yifB at 2458.825 kb on - strand, within yifB at 2458.825 kb on - strand, within yifB at 2458.874 kb on + strand, within yifB at 2458.874 kb on + strand, within yifB at 2458.959 kb on - strand, within yifB at 2458.983 kb on + strand, within yifB at 2458.984 kb on - strand, within yifB at 2458.984 kb on - strand, within yifB at 2459.007 kb on + strand, within yifB at 2459.008 kb on - strand, within yifB at 2459.008 kb on - strand, within yifB at 2459.027 kb on + strand, within yifB at 2459.027 kb on + strand, within yifB at 2459.027 kb on + strand, within yifB at 2459.028 kb on - strand, within yifB at 2459.028 kb on - strand, within yifB at 2459.063 kb on + strand, within yifB at 2459.064 kb on - strand, within yifB at 2459.088 kb on - strand, within yifB
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,457,081 - ilvG NIAGMN_12410 0.61 -0.9 2,457,123 + ilvG NIAGMN_12410 0.63 -2.7 2,457,123 + ilvG NIAGMN_12410 0.63 -0.2 2,457,123 + ilvG NIAGMN_12410 0.63 -1.5 2,457,123 + ilvG NIAGMN_12410 0.63 -1.7 2,457,123 + ilvG NIAGMN_12410 0.63 -4.9 2,457,123 + ilvG NIAGMN_12410 0.63 -3.2 2,457,123 + ilvG NIAGMN_12410 0.63 -2.2 2,457,123 + ilvG NIAGMN_12410 0.63 -1.2 2,457,124 - ilvG NIAGMN_12410 0.63 +0.5 2,457,124 - ilvG NIAGMN_12410 0.63 -1.2 2,457,124 - ilvG NIAGMN_12410 0.63 -0.6 2,457,124 - ilvG NIAGMN_12410 0.63 -0.9 2,457,124 - ilvG NIAGMN_12410 0.63 -0.7 2,457,124 - ilvG NIAGMN_12410 0.63 -0.6 2,457,124 - ilvG NIAGMN_12410 0.63 -1.1 2,457,124 - ilvG NIAGMN_12410 0.63 -2.5 2,457,247 + ilvG NIAGMN_12410 0.71 -1.1 2,457,247 + ilvG NIAGMN_12410 0.71 -1.1 2,457,247 + ilvG NIAGMN_12410 0.71 -0.1 2,457,316 + ilvG NIAGMN_12410 0.75 -3.0 2,457,364 + ilvG NIAGMN_12410 0.78 -1.7 2,457,364 + ilvG NIAGMN_12410 0.78 -2.5 2,457,460 + ilvG NIAGMN_12410 0.84 -1.7 2,457,461 - ilvG NIAGMN_12410 0.84 -0.4 2,457,461 - ilvG NIAGMN_12410 0.84 -0.6 2,457,461 - ilvG NIAGMN_12410 0.84 -0.7 2,457,467 + ilvG NIAGMN_12410 0.84 -1.4 2,457,526 + ilvG NIAGMN_12410 0.88 -1.4 2,457,526 + ilvG NIAGMN_12410 0.88 -1.7 2,457,527 - ilvG NIAGMN_12410 0.88 -0.9 2,457,530 + ilvG NIAGMN_12410 0.88 -0.1 2,457,530 + ilvG NIAGMN_12410 0.88 -0.4 2,457,530 + ilvG NIAGMN_12410 0.88 -2.2 2,457,530 + ilvG NIAGMN_12410 0.88 -0.8 2,457,530 + ilvG NIAGMN_12410 0.88 -1.9 2,457,530 + ilvG NIAGMN_12410 0.88 -1.8 2,457,530 + ilvG NIAGMN_12410 0.88 -0.7 2,457,531 - ilvG NIAGMN_12410 0.88 -0.5 2,457,531 - ilvG NIAGMN_12410 0.88 +0.5 2,457,531 - ilvG NIAGMN_12410 0.88 -1.0 2,457,531 - ilvG NIAGMN_12410 0.88 +0.0 2,457,531 - ilvG NIAGMN_12410 0.88 -0.4 2,457,531 - ilvG NIAGMN_12410 0.88 +0.1 2,457,624 + -2.3 2,457,624 + -2.3 2,457,624 + -2.3 2,457,625 - -1.1 2,457,625 - -1.7 2,457,636 + -1.2 2,457,637 - +0.6 2,457,637 - -0.4 2,457,646 + -1.8 2,457,646 + -1.2 2,457,646 + -2.1 2,457,646 + -1.2 2,457,647 - -0.5 2,457,647 - +0.5 2,457,647 - -0.5 2,457,704 + -1.8 2,457,704 + -1.1 2,457,704 + -4.1 2,457,704 + -1.3 2,457,704 + -2.0 2,457,704 + -1.4 2,457,704 + -0.6 2,457,704 + -0.9 2,457,705 - -1.0 2,457,705 - -0.2 2,457,705 - -0.4 2,457,705 - +0.5 2,457,727 + -2.1 2,457,727 + -1.1 2,457,727 + -0.8 2,457,727 + -1.7 2,457,728 - -0.2 2,457,728 - -0.1 2,457,728 - +0.6 2,457,728 - +0.4 2,457,731 + -1.4 2,457,731 + -0.9 2,457,731 + -2.1 2,457,732 - -0.2 2,457,732 - +0.3 2,457,732 - +0.4 2,457,774 + -1.9 2,457,804 + -0.2 2,457,846 + -2.8 2,457,847 - +0.9 2,457,847 - -0.1 2,457,847 - +0.3 2,457,847 - -0.6 2,457,869 - +0.4 2,457,951 + -0.9 2,457,951 + -1.6 2,457,952 - -0.1 2,458,014 + -0.7 2,458,038 - -1.2 2,458,156 + -0.2 2,458,156 + +0.4 2,458,282 + +0.3 2,458,282 + -0.6 2,458,287 + +0.7 2,458,287 + +0.6 2,458,287 + +0.1 2,458,288 - -0.3 2,458,288 - -0.5 2,458,295 + +0.4 2,458,295 + -1.1 2,458,295 + +0.1 2,458,296 - +0.3 2,458,296 - -0.6 2,458,296 - +0.8 2,458,317 + -0.3 2,458,317 + -0.0 2,458,317 + -0.1 2,458,318 - +0.2 2,458,318 - +0.6 2,458,318 - +1.3 2,458,339 - +0.8 2,458,358 + -2.2 2,458,358 + -0.9 2,458,359 - -2.2 2,458,385 + -2.0 2,458,385 + -0.0 2,458,385 + +0.3 2,458,385 + +0.2 2,458,385 + -0.7 2,458,385 + -0.2 2,458,385 + -0.3 2,458,386 - -0.1 2,458,386 - -0.2 2,458,386 - +0.0 2,458,386 - -1.1 2,458,386 - +0.4 2,458,386 - -0.7 2,458,386 - +0.6 2,458,386 - +0.6 2,458,389 + +0.6 2,458,389 + -0.8 2,458,389 + +0.2 2,458,390 - +0.1 2,458,390 - +0.6 2,458,390 - -0.2 2,458,390 - +0.7 2,458,390 - +0.4 2,458,390 - +0.8 2,458,390 - -0.9 2,458,390 - +0.8 2,458,390 - -0.9 2,458,395 + -0.2 2,458,413 - +0.0 2,458,413 - -1.6 2,458,477 - yifB NIAGMN_12420 0.10 -0.6 2,458,495 + yifB NIAGMN_12420 0.12 -0.5 2,458,518 + yifB NIAGMN_12420 0.13 -0.3 2,458,519 - yifB NIAGMN_12420 0.13 -0.3 2,458,538 + yifB NIAGMN_12420 0.14 -0.1 2,458,538 + yifB NIAGMN_12420 0.14 -0.2 2,458,539 - yifB NIAGMN_12420 0.15 +0.1 2,458,559 - yifB NIAGMN_12420 0.16 +0.2 2,458,559 - yifB NIAGMN_12420 0.16 -0.5 2,458,565 + yifB NIAGMN_12420 0.16 -0.2 2,458,565 + yifB NIAGMN_12420 0.16 +0.4 2,458,565 + yifB NIAGMN_12420 0.16 -0.1 2,458,566 - yifB NIAGMN_12420 0.16 -0.3 2,458,566 - yifB NIAGMN_12420 0.16 -1.7 2,458,566 - yifB NIAGMN_12420 0.16 +0.5 2,458,566 - yifB NIAGMN_12420 0.16 +0.9 2,458,605 + yifB NIAGMN_12420 0.19 -0.7 2,458,606 - yifB NIAGMN_12420 0.19 +0.7 2,458,606 - yifB NIAGMN_12420 0.19 -0.5 2,458,606 - yifB NIAGMN_12420 0.19 +0.7 2,458,619 + yifB NIAGMN_12420 0.20 -0.1 2,458,619 + yifB NIAGMN_12420 0.20 +0.1 2,458,620 - yifB NIAGMN_12420 0.20 -0.9 2,458,627 + yifB NIAGMN_12420 0.20 -0.5 2,458,628 - yifB NIAGMN_12420 0.20 +0.4 2,458,628 - yifB NIAGMN_12420 0.20 +0.1 2,458,635 - yifB NIAGMN_12420 0.21 +0.9 2,458,635 - yifB NIAGMN_12420 0.21 +1.1 2,458,635 - yifB NIAGMN_12420 0.21 +0.8 2,458,653 + yifB NIAGMN_12420 0.22 -1.2 2,458,653 + yifB NIAGMN_12420 0.22 -0.2 2,458,704 + yifB NIAGMN_12420 0.25 +0.1 2,458,705 - yifB NIAGMN_12420 0.25 -1.1 2,458,705 - yifB NIAGMN_12420 0.25 +1.7 2,458,705 - yifB NIAGMN_12420 0.25 +0.9 2,458,707 + yifB NIAGMN_12420 0.26 +0.2 2,458,708 - yifB NIAGMN_12420 0.26 +0.9 2,458,708 - yifB NIAGMN_12420 0.26 +0.9 2,458,741 - yifB NIAGMN_12420 0.28 -1.0 2,458,760 + yifB NIAGMN_12420 0.29 -0.2 2,458,764 + yifB NIAGMN_12420 0.29 -1.4 2,458,765 - yifB NIAGMN_12420 0.29 -0.2 2,458,824 + yifB NIAGMN_12420 0.33 -0.7 2,458,824 + yifB NIAGMN_12420 0.33 -0.8 2,458,825 - yifB NIAGMN_12420 0.33 +0.6 2,458,825 - yifB NIAGMN_12420 0.33 -0.9 2,458,874 + yifB NIAGMN_12420 0.37 +0.0 2,458,874 + yifB NIAGMN_12420 0.37 -1.1 2,458,959 - yifB NIAGMN_12420 0.42 -0.2 2,458,983 + yifB NIAGMN_12420 0.44 +0.7 2,458,984 - yifB NIAGMN_12420 0.44 +0.0 2,458,984 - yifB NIAGMN_12420 0.44 +0.1 2,459,007 + yifB NIAGMN_12420 0.45 -0.1 2,459,008 - yifB NIAGMN_12420 0.45 -3.9 2,459,008 - yifB NIAGMN_12420 0.45 -0.5 2,459,027 + yifB NIAGMN_12420 0.47 -0.7 2,459,027 + yifB NIAGMN_12420 0.47 -1.0 2,459,027 + yifB NIAGMN_12420 0.47 -0.1 2,459,028 - yifB NIAGMN_12420 0.47 -0.2 2,459,028 - yifB NIAGMN_12420 0.47 -0.3 2,459,063 + yifB NIAGMN_12420 0.49 -0.9 2,459,064 - yifB NIAGMN_12420 0.49 -1.2 2,459,088 - yifB NIAGMN_12420 0.51 -0.9
Or see this region's nucleotide sequence