Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mobA and mobB overlap by 19 nucleotides mobB and 5S_rrna are separated by 101 nucleotides 5S_rrna and 23S_rrna are separated by 94 nucleotides 23S_rrna and Ala_trna are separated by 183 nucleotides Ala_trna and Ile_trna are separated by 42 nucleotides Ile_trna and 16S_rrna are separated by 68 nucleotides
NIAGMN_11940: mobA - molybdenum cofactor guanylyltransferase MobA, at 2,363,773 to 2,364,357
mobA
NIAGMN_11945: mobB - molybdopterin-guanine dinucleotide biosynthesis protein MobB, at 2,364,339 to 2,364,866
mobB
NIAGMN_11950: 5S_rrna - 5S ribosomal RNA, at 2,364,968 to 2,365,083
_rrna
NIAGMN_11955: 23S_rrna - 23S ribosomal RNA, at 2,365,178 to 2,368,082
_rrna
NIAGMN_11965: Ala_trna - tRNA-Ala(tgc), at 2,368,266 to 2,368,341
_trna
NIAGMN_11970: Ile_trna - tRNA-Ile(gat), at 2,368,384 to 2,368,460
_trna
NIAGMN_11975: 16S_rrna - 16S ribosomal RNA, at 2,368,529 to 2,370,070
_rrna
Position (kb)
2365
2366
2367
2368
2369 Strain fitness (log2 ratio)
-2
-1
0
1 at 2364.180 kb on + strand, within mobA at 2364.181 kb on - strand, within mobA at 2364.185 kb on + strand, within mobA at 2364.186 kb on - strand, within mobA at 2364.186 kb on - strand, within mobA at 2364.206 kb on + strand, within mobA at 2364.206 kb on + strand, within mobA at 2364.207 kb on - strand, within mobA at 2364.207 kb on - strand, within mobA at 2364.209 kb on + strand, within mobA at 2364.212 kb on + strand, within mobA at 2364.212 kb on + strand, within mobA at 2364.212 kb on + strand, within mobA at 2364.212 kb on + strand, within mobA at 2364.212 kb on + strand, within mobA at 2364.212 kb on + strand, within mobA at 2364.218 kb on - strand, within mobA at 2364.218 kb on - strand, within mobA at 2364.252 kb on + strand, within mobA at 2364.252 kb on + strand, within mobA at 2364.252 kb on + strand, within mobA at 2364.253 kb on - strand, within mobA at 2364.253 kb on - strand, within mobA at 2364.294 kb on + strand, within mobA at 2364.294 kb on + strand, within mobA at 2364.294 kb on + strand, within mobA at 2364.358 kb on + strand at 2364.430 kb on + strand, within mobB at 2364.467 kb on + strand, within mobB at 2364.467 kb on + strand, within mobB at 2364.492 kb on - strand, within mobB at 2364.506 kb on + strand, within mobB at 2364.506 kb on + strand, within mobB at 2364.506 kb on + strand, within mobB at 2364.506 kb on + strand, within mobB at 2364.506 kb on + strand, within mobB at 2364.510 kb on + strand, within mobB at 2364.510 kb on + strand, within mobB at 2364.510 kb on + strand, within mobB at 2364.511 kb on - strand, within mobB at 2364.511 kb on - strand, within mobB at 2364.607 kb on + strand, within mobB at 2364.632 kb on + strand, within mobB at 2364.632 kb on + strand, within mobB at 2364.668 kb on + strand, within mobB at 2364.668 kb on + strand, within mobB at 2364.669 kb on - strand, within mobB at 2364.669 kb on - strand, within mobB at 2364.733 kb on + strand, within mobB at 2364.739 kb on + strand, within mobB at 2364.752 kb on + strand, within mobB at 2364.752 kb on + strand, within mobB at 2364.779 kb on + strand, within mobB at 2364.803 kb on + strand, within mobB at 2364.803 kb on + strand, within mobB at 2364.806 kb on + strand, within mobB at 2364.806 kb on + strand, within mobB at 2364.806 kb on + strand, within mobB at 2364.806 kb on + strand, within mobB at 2364.806 kb on + strand, within mobB at 2364.806 kb on + strand, within mobB at 2364.806 kb on + strand, within mobB at 2364.865 kb on - strand at 2364.874 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,364,180 + mobA NIAGMN_11940 0.70 -2.0 2,364,181 - mobA NIAGMN_11940 0.70 +0.6 2,364,185 + mobA NIAGMN_11940 0.70 -0.3 2,364,186 - mobA NIAGMN_11940 0.71 -0.3 2,364,186 - mobA NIAGMN_11940 0.71 +0.3 2,364,206 + mobA NIAGMN_11940 0.74 +1.0 2,364,206 + mobA NIAGMN_11940 0.74 -0.2 2,364,207 - mobA NIAGMN_11940 0.74 +0.7 2,364,207 - mobA NIAGMN_11940 0.74 +0.1 2,364,209 + mobA NIAGMN_11940 0.75 -1.8 2,364,212 + mobA NIAGMN_11940 0.75 -0.5 2,364,212 + mobA NIAGMN_11940 0.75 +0.3 2,364,212 + mobA NIAGMN_11940 0.75 -0.3 2,364,212 + mobA NIAGMN_11940 0.75 +0.2 2,364,212 + mobA NIAGMN_11940 0.75 +0.1 2,364,212 + mobA NIAGMN_11940 0.75 +0.9 2,364,218 - mobA NIAGMN_11940 0.76 +1.5 2,364,218 - mobA NIAGMN_11940 0.76 +0.5 2,364,252 + mobA NIAGMN_11940 0.82 +0.5 2,364,252 + mobA NIAGMN_11940 0.82 +0.5 2,364,252 + mobA NIAGMN_11940 0.82 +0.2 2,364,253 - mobA NIAGMN_11940 0.82 +0.2 2,364,253 - mobA NIAGMN_11940 0.82 -0.6 2,364,294 + mobA NIAGMN_11940 0.89 +0.6 2,364,294 + mobA NIAGMN_11940 0.89 -1.3 2,364,294 + mobA NIAGMN_11940 0.89 -0.2 2,364,358 + +0.2 2,364,430 + mobB NIAGMN_11945 0.17 -1.5 2,364,467 + mobB NIAGMN_11945 0.24 -0.0 2,364,467 + mobB NIAGMN_11945 0.24 -1.7 2,364,492 - mobB NIAGMN_11945 0.29 +1.3 2,364,506 + mobB NIAGMN_11945 0.32 -0.4 2,364,506 + mobB NIAGMN_11945 0.32 +0.0 2,364,506 + mobB NIAGMN_11945 0.32 -0.0 2,364,506 + mobB NIAGMN_11945 0.32 +0.3 2,364,506 + mobB NIAGMN_11945 0.32 +0.5 2,364,510 + mobB NIAGMN_11945 0.32 -0.2 2,364,510 + mobB NIAGMN_11945 0.32 -0.7 2,364,510 + mobB NIAGMN_11945 0.32 +0.1 2,364,511 - mobB NIAGMN_11945 0.33 -1.3 2,364,511 - mobB NIAGMN_11945 0.33 +0.6 2,364,607 + mobB NIAGMN_11945 0.51 +0.1 2,364,632 + mobB NIAGMN_11945 0.55 -0.4 2,364,632 + mobB NIAGMN_11945 0.55 -0.2 2,364,668 + mobB NIAGMN_11945 0.62 +0.2 2,364,668 + mobB NIAGMN_11945 0.62 -0.1 2,364,669 - mobB NIAGMN_11945 0.62 -0.1 2,364,669 - mobB NIAGMN_11945 0.62 +0.5 2,364,733 + mobB NIAGMN_11945 0.75 +0.7 2,364,739 + mobB NIAGMN_11945 0.76 +0.0 2,364,752 + mobB NIAGMN_11945 0.78 +0.6 2,364,752 + mobB NIAGMN_11945 0.78 +0.5 2,364,779 + mobB NIAGMN_11945 0.83 -0.5 2,364,803 + mobB NIAGMN_11945 0.88 +0.1 2,364,803 + mobB NIAGMN_11945 0.88 -0.7 2,364,806 + mobB NIAGMN_11945 0.88 -0.4 2,364,806 + mobB NIAGMN_11945 0.88 +0.7 2,364,806 + mobB NIAGMN_11945 0.88 +0.7 2,364,806 + mobB NIAGMN_11945 0.88 -0.2 2,364,806 + mobB NIAGMN_11945 0.88 -0.5 2,364,806 + mobB NIAGMN_11945 0.88 +0.7 2,364,806 + mobB NIAGMN_11945 0.88 +0.9 2,364,865 - +0.1 2,364,874 + -1.4
Or see this region's nucleotide sequence