Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt sbp and pfkA are separated by 318 nucleotides pfkA and fieF are separated by 180 nucleotides
NIAGMN_11575: sbp - sulfate/thiosulfate ABC transporter substrate-binding protein Sbp, at 2,291,942 to 2,292,931
sbp
NIAGMN_11585: pfkA - 6-phosphofructokinase, at 2,293,250 to 2,294,212
pfkA
NIAGMN_11590: fieF - CDF family cation-efflux transporter FieF, at 2,294,393 to 2,295,295
fieF
Position (kb)
2293
2294
2295 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2292.256 kb on + strand, within sbp at 2292.257 kb on - strand, within sbp at 2292.311 kb on + strand, within sbp at 2292.312 kb on - strand, within sbp at 2292.312 kb on - strand, within sbp at 2292.312 kb on - strand, within sbp at 2292.312 kb on - strand, within sbp at 2292.388 kb on - strand, within sbp at 2292.447 kb on + strand, within sbp at 2292.465 kb on + strand, within sbp at 2292.465 kb on + strand, within sbp at 2292.568 kb on + strand, within sbp at 2292.569 kb on - strand, within sbp at 2292.572 kb on + strand, within sbp at 2292.572 kb on + strand, within sbp at 2292.573 kb on - strand, within sbp at 2292.597 kb on + strand, within sbp at 2292.675 kb on + strand, within sbp at 2292.816 kb on + strand, within sbp at 2292.816 kb on + strand, within sbp at 2292.816 kb on + strand, within sbp at 2292.817 kb on - strand, within sbp at 2292.817 kb on - strand, within sbp at 2292.817 kb on - strand, within sbp at 2292.846 kb on + strand at 2292.846 kb on + strand at 2292.846 kb on + strand at 2292.847 kb on - strand at 2292.868 kb on + strand at 2292.914 kb on + strand at 2292.914 kb on + strand at 2292.915 kb on - strand at 2292.915 kb on - strand at 2292.945 kb on + strand at 2292.945 kb on + strand at 2292.945 kb on + strand at 2292.945 kb on + strand at 2292.945 kb on + strand at 2292.945 kb on + strand at 2292.945 kb on + strand at 2292.945 kb on + strand at 2292.945 kb on + strand at 2292.945 kb on + strand at 2292.945 kb on + strand at 2292.946 kb on - strand at 2292.946 kb on - strand at 2292.946 kb on - strand at 2292.946 kb on - strand at 2292.946 kb on - strand at 2292.946 kb on - strand at 2292.946 kb on - strand at 2292.946 kb on - strand at 2293.028 kb on + strand at 2293.028 kb on + strand at 2293.031 kb on - strand at 2293.031 kb on - strand at 2293.031 kb on - strand at 2293.251 kb on + strand at 2293.252 kb on - strand at 2293.252 kb on - strand at 2293.254 kb on + strand at 2293.255 kb on - strand at 2293.352 kb on + strand, within pfkA at 2293.355 kb on - strand, within pfkA at 2293.359 kb on - strand, within pfkA at 2293.359 kb on - strand, within pfkA at 2293.402 kb on - strand, within pfkA at 2293.402 kb on - strand, within pfkA at 2293.540 kb on + strand, within pfkA at 2293.540 kb on + strand, within pfkA at 2293.541 kb on - strand, within pfkA at 2293.541 kb on - strand, within pfkA at 2293.541 kb on - strand, within pfkA at 2293.541 kb on - strand, within pfkA at 2293.541 kb on - strand, within pfkA at 2293.809 kb on + strand, within pfkA at 2293.893 kb on + strand, within pfkA at 2294.054 kb on + strand, within pfkA at 2294.054 kb on + strand, within pfkA at 2294.216 kb on + strand at 2294.241 kb on + strand at 2294.299 kb on - strand at 2294.299 kb on - strand at 2294.299 kb on - strand at 2294.299 kb on - strand at 2294.299 kb on - strand at 2294.299 kb on - strand at 2294.302 kb on - strand at 2294.302 kb on - strand at 2294.304 kb on - strand at 2294.304 kb on - strand at 2294.385 kb on + strand at 2294.385 kb on + strand at 2294.386 kb on - strand at 2294.386 kb on - strand at 2294.386 kb on - strand at 2294.395 kb on - strand at 2294.405 kb on - strand at 2294.405 kb on - strand at 2294.405 kb on - strand at 2294.423 kb on - strand at 2294.423 kb on - strand at 2294.486 kb on - strand, within fieF at 2294.512 kb on + strand, within fieF at 2294.512 kb on + strand, within fieF at 2294.512 kb on + strand, within fieF at 2294.512 kb on + strand, within fieF at 2294.512 kb on + strand, within fieF at 2294.512 kb on + strand, within fieF at 2294.512 kb on + strand, within fieF at 2294.512 kb on + strand, within fieF at 2294.512 kb on + strand, within fieF at 2294.512 kb on + strand, within fieF at 2294.512 kb on + strand, within fieF at 2294.513 kb on - strand, within fieF at 2294.513 kb on - strand, within fieF at 2294.513 kb on - strand, within fieF at 2294.513 kb on - strand, within fieF at 2294.513 kb on - strand, within fieF at 2294.513 kb on - strand, within fieF at 2294.513 kb on - strand, within fieF at 2294.513 kb on - strand, within fieF at 2294.513 kb on - strand, within fieF at 2294.513 kb on - strand, within fieF at 2294.513 kb on - strand, within fieF at 2294.513 kb on - strand, within fieF at 2294.563 kb on + strand, within fieF at 2294.642 kb on - strand, within fieF at 2294.642 kb on - strand, within fieF at 2294.642 kb on - strand, within fieF at 2294.666 kb on + strand, within fieF at 2294.667 kb on - strand, within fieF at 2294.682 kb on - strand, within fieF at 2294.701 kb on - strand, within fieF at 2294.711 kb on + strand, within fieF at 2294.719 kb on + strand, within fieF at 2294.719 kb on + strand, within fieF at 2294.720 kb on - strand, within fieF at 2294.721 kb on + strand, within fieF at 2294.723 kb on + strand, within fieF at 2294.723 kb on + strand, within fieF at 2294.723 kb on + strand, within fieF at 2294.723 kb on + strand, within fieF at 2294.723 kb on + strand, within fieF at 2294.723 kb on + strand, within fieF at 2294.723 kb on + strand, within fieF at 2294.724 kb on - strand, within fieF at 2294.724 kb on - strand, within fieF at 2294.724 kb on - strand, within fieF at 2294.724 kb on - strand, within fieF at 2294.724 kb on - strand, within fieF at 2294.728 kb on + strand, within fieF at 2294.729 kb on - strand, within fieF at 2294.730 kb on + strand, within fieF at 2294.731 kb on - strand, within fieF at 2294.731 kb on - strand, within fieF at 2294.821 kb on + strand, within fieF at 2294.821 kb on + strand, within fieF at 2294.822 kb on - strand, within fieF at 2294.840 kb on + strand, within fieF at 2294.840 kb on + strand, within fieF at 2294.840 kb on + strand, within fieF at 2294.840 kb on + strand, within fieF at 2294.840 kb on + strand, within fieF at 2294.840 kb on + strand, within fieF at 2294.840 kb on + strand, within fieF at 2294.840 kb on + strand, within fieF at 2294.840 kb on + strand, within fieF at 2294.840 kb on + strand, within fieF at 2294.841 kb on - strand, within fieF at 2294.841 kb on - strand, within fieF at 2294.841 kb on - strand, within fieF at 2294.841 kb on - strand, within fieF at 2294.841 kb on - strand, within fieF at 2294.841 kb on - strand, within fieF at 2294.841 kb on - strand, within fieF at 2294.841 kb on - strand, within fieF at 2294.841 kb on - strand, within fieF at 2294.841 kb on - strand, within fieF at 2294.841 kb on - strand, within fieF at 2294.841 kb on - strand, within fieF at 2294.841 kb on - strand, within fieF at 2294.841 kb on - strand, within fieF at 2294.841 kb on - strand, within fieF at 2294.841 kb on - strand, within fieF at 2294.841 kb on - strand, within fieF at 2294.845 kb on + strand, within fieF at 2294.845 kb on + strand, within fieF at 2294.846 kb on - strand, within fieF at 2294.921 kb on + strand, within fieF at 2294.979 kb on - strand, within fieF at 2295.012 kb on - strand, within fieF at 2295.012 kb on - strand, within fieF at 2295.028 kb on + strand, within fieF at 2295.034 kb on + strand, within fieF at 2295.034 kb on + strand, within fieF at 2295.034 kb on + strand, within fieF at 2295.034 kb on + strand, within fieF at 2295.034 kb on + strand, within fieF at 2295.034 kb on + strand, within fieF at 2295.035 kb on - strand, within fieF at 2295.035 kb on - strand, within fieF at 2295.035 kb on - strand, within fieF at 2295.035 kb on - strand, within fieF at 2295.035 kb on - strand, within fieF at 2295.035 kb on - strand, within fieF at 2295.035 kb on - strand, within fieF at 2295.035 kb on - strand, within fieF at 2295.198 kb on + strand, within fieF at 2295.198 kb on + strand, within fieF at 2295.198 kb on + strand, within fieF at 2295.199 kb on - strand, within fieF
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,292,256 + sbp NIAGMN_11575 0.32 +2.0 2,292,257 - sbp NIAGMN_11575 0.32 -0.5 2,292,311 + sbp NIAGMN_11575 0.37 -1.4 2,292,312 - sbp NIAGMN_11575 0.37 +0.5 2,292,312 - sbp NIAGMN_11575 0.37 -0.1 2,292,312 - sbp NIAGMN_11575 0.37 +0.4 2,292,312 - sbp NIAGMN_11575 0.37 -0.4 2,292,388 - sbp NIAGMN_11575 0.45 +0.5 2,292,447 + sbp NIAGMN_11575 0.51 -0.6 2,292,465 + sbp NIAGMN_11575 0.53 +0.2 2,292,465 + sbp NIAGMN_11575 0.53 -0.5 2,292,568 + sbp NIAGMN_11575 0.63 +0.1 2,292,569 - sbp NIAGMN_11575 0.63 -0.4 2,292,572 + sbp NIAGMN_11575 0.64 -1.0 2,292,572 + sbp NIAGMN_11575 0.64 +0.5 2,292,573 - sbp NIAGMN_11575 0.64 +0.0 2,292,597 + sbp NIAGMN_11575 0.66 +0.5 2,292,675 + sbp NIAGMN_11575 0.74 +0.1 2,292,816 + sbp NIAGMN_11575 0.88 +0.3 2,292,816 + sbp NIAGMN_11575 0.88 +0.1 2,292,816 + sbp NIAGMN_11575 0.88 -1.0 2,292,817 - sbp NIAGMN_11575 0.88 -0.4 2,292,817 - sbp NIAGMN_11575 0.88 -0.2 2,292,817 - sbp NIAGMN_11575 0.88 +0.2 2,292,846 + -0.5 2,292,846 + +0.8 2,292,846 + +0.6 2,292,847 - +1.8 2,292,868 + -0.2 2,292,914 + -0.0 2,292,914 + -0.0 2,292,915 - -1.9 2,292,915 - +0.4 2,292,945 + -0.6 2,292,945 + +0.2 2,292,945 + -0.6 2,292,945 + -0.3 2,292,945 + +0.4 2,292,945 + +0.7 2,292,945 + +0.7 2,292,945 + -0.7 2,292,945 + -0.3 2,292,945 + -0.2 2,292,945 + +0.5 2,292,946 - +0.5 2,292,946 - -0.0 2,292,946 - -0.1 2,292,946 - +0.4 2,292,946 - -2.0 2,292,946 - -0.7 2,292,946 - +0.1 2,292,946 - -0.4 2,293,028 + -0.1 2,293,028 + -0.3 2,293,031 - +0.8 2,293,031 - -0.8 2,293,031 - -0.6 2,293,251 + -0.1 2,293,252 - +0.1 2,293,252 - -0.8 2,293,254 + -2.6 2,293,255 - -0.7 2,293,352 + pfkA NIAGMN_11585 0.11 -3.4 2,293,355 - pfkA NIAGMN_11585 0.11 -0.9 2,293,359 - pfkA NIAGMN_11585 0.11 -1.9 2,293,359 - pfkA NIAGMN_11585 0.11 -1.8 2,293,402 - pfkA NIAGMN_11585 0.16 -2.0 2,293,402 - pfkA NIAGMN_11585 0.16 -0.7 2,293,540 + pfkA NIAGMN_11585 0.30 -2.1 2,293,540 + pfkA NIAGMN_11585 0.30 -1.1 2,293,541 - pfkA NIAGMN_11585 0.30 -0.9 2,293,541 - pfkA NIAGMN_11585 0.30 -1.2 2,293,541 - pfkA NIAGMN_11585 0.30 -0.5 2,293,541 - pfkA NIAGMN_11585 0.30 -1.5 2,293,541 - pfkA NIAGMN_11585 0.30 -0.7 2,293,809 + pfkA NIAGMN_11585 0.58 -1.1 2,293,893 + pfkA NIAGMN_11585 0.67 -0.7 2,294,054 + pfkA NIAGMN_11585 0.83 -0.9 2,294,054 + pfkA NIAGMN_11585 0.83 -1.1 2,294,216 + -1.4 2,294,241 + +0.9 2,294,299 - -1.1 2,294,299 - +0.4 2,294,299 - +1.3 2,294,299 - +0.3 2,294,299 - +0.5 2,294,299 - +0.7 2,294,302 - +0.3 2,294,302 - -0.5 2,294,304 - -0.1 2,294,304 - +0.6 2,294,385 + -2.5 2,294,385 + -0.8 2,294,386 - -0.0 2,294,386 - -0.2 2,294,386 - +0.5 2,294,395 - +0.4 2,294,405 - -0.2 2,294,405 - -0.5 2,294,405 - -0.1 2,294,423 - +1.2 2,294,423 - -0.2 2,294,486 - fieF NIAGMN_11590 0.10 +1.9 2,294,512 + fieF NIAGMN_11590 0.13 +0.3 2,294,512 + fieF NIAGMN_11590 0.13 +0.3 2,294,512 + fieF NIAGMN_11590 0.13 -0.2 2,294,512 + fieF NIAGMN_11590 0.13 +0.6 2,294,512 + fieF NIAGMN_11590 0.13 -0.1 2,294,512 + fieF NIAGMN_11590 0.13 +0.5 2,294,512 + fieF NIAGMN_11590 0.13 -1.3 2,294,512 + fieF NIAGMN_11590 0.13 +0.2 2,294,512 + fieF NIAGMN_11590 0.13 +0.0 2,294,512 + fieF NIAGMN_11590 0.13 -0.4 2,294,512 + fieF NIAGMN_11590 0.13 +0.0 2,294,513 - fieF NIAGMN_11590 0.13 +1.2 2,294,513 - fieF NIAGMN_11590 0.13 -1.0 2,294,513 - fieF NIAGMN_11590 0.13 -0.6 2,294,513 - fieF NIAGMN_11590 0.13 +0.3 2,294,513 - fieF NIAGMN_11590 0.13 -0.6 2,294,513 - fieF NIAGMN_11590 0.13 +0.7 2,294,513 - fieF NIAGMN_11590 0.13 +1.2 2,294,513 - fieF NIAGMN_11590 0.13 +0.0 2,294,513 - fieF NIAGMN_11590 0.13 +0.4 2,294,513 - fieF NIAGMN_11590 0.13 -0.8 2,294,513 - fieF NIAGMN_11590 0.13 -0.4 2,294,513 - fieF NIAGMN_11590 0.13 +0.6 2,294,563 + fieF NIAGMN_11590 0.19 +0.6 2,294,642 - fieF NIAGMN_11590 0.28 +0.7 2,294,642 - fieF NIAGMN_11590 0.28 -0.4 2,294,642 - fieF NIAGMN_11590 0.28 -0.4 2,294,666 + fieF NIAGMN_11590 0.30 +0.4 2,294,667 - fieF NIAGMN_11590 0.30 -0.6 2,294,682 - fieF NIAGMN_11590 0.32 +0.5 2,294,701 - fieF NIAGMN_11590 0.34 +0.6 2,294,711 + fieF NIAGMN_11590 0.35 -0.1 2,294,719 + fieF NIAGMN_11590 0.36 -0.3 2,294,719 + fieF NIAGMN_11590 0.36 +0.7 2,294,720 - fieF NIAGMN_11590 0.36 -0.1 2,294,721 + fieF NIAGMN_11590 0.36 -0.3 2,294,723 + fieF NIAGMN_11590 0.37 -0.2 2,294,723 + fieF NIAGMN_11590 0.37 -1.4 2,294,723 + fieF NIAGMN_11590 0.37 -0.5 2,294,723 + fieF NIAGMN_11590 0.37 +1.1 2,294,723 + fieF NIAGMN_11590 0.37 -1.6 2,294,723 + fieF NIAGMN_11590 0.37 -1.8 2,294,723 + fieF NIAGMN_11590 0.37 +1.4 2,294,724 - fieF NIAGMN_11590 0.37 +0.2 2,294,724 - fieF NIAGMN_11590 0.37 -0.5 2,294,724 - fieF NIAGMN_11590 0.37 -1.0 2,294,724 - fieF NIAGMN_11590 0.37 +0.2 2,294,724 - fieF NIAGMN_11590 0.37 -0.3 2,294,728 + fieF NIAGMN_11590 0.37 +0.6 2,294,729 - fieF NIAGMN_11590 0.37 -0.2 2,294,730 + fieF NIAGMN_11590 0.37 -0.2 2,294,731 - fieF NIAGMN_11590 0.37 -0.2 2,294,731 - fieF NIAGMN_11590 0.37 +0.4 2,294,821 + fieF NIAGMN_11590 0.47 -0.2 2,294,821 + fieF NIAGMN_11590 0.47 -2.2 2,294,822 - fieF NIAGMN_11590 0.48 +0.3 2,294,840 + fieF NIAGMN_11590 0.50 +0.3 2,294,840 + fieF NIAGMN_11590 0.50 +0.7 2,294,840 + fieF NIAGMN_11590 0.50 -1.3 2,294,840 + fieF NIAGMN_11590 0.50 -0.9 2,294,840 + fieF NIAGMN_11590 0.50 +0.4 2,294,840 + fieF NIAGMN_11590 0.50 -0.3 2,294,840 + fieF NIAGMN_11590 0.50 +1.2 2,294,840 + fieF NIAGMN_11590 0.50 -0.5 2,294,840 + fieF NIAGMN_11590 0.50 +0.3 2,294,840 + fieF NIAGMN_11590 0.50 -1.1 2,294,841 - fieF NIAGMN_11590 0.50 -0.1 2,294,841 - fieF NIAGMN_11590 0.50 +0.8 2,294,841 - fieF NIAGMN_11590 0.50 -0.9 2,294,841 - fieF NIAGMN_11590 0.50 +0.4 2,294,841 - fieF NIAGMN_11590 0.50 +0.1 2,294,841 - fieF NIAGMN_11590 0.50 +0.3 2,294,841 - fieF NIAGMN_11590 0.50 -0.3 2,294,841 - fieF NIAGMN_11590 0.50 +0.4 2,294,841 - fieF NIAGMN_11590 0.50 -1.5 2,294,841 - fieF NIAGMN_11590 0.50 -0.7 2,294,841 - fieF NIAGMN_11590 0.50 -0.5 2,294,841 - fieF NIAGMN_11590 0.50 +1.2 2,294,841 - fieF NIAGMN_11590 0.50 +0.8 2,294,841 - fieF NIAGMN_11590 0.50 +0.4 2,294,841 - fieF NIAGMN_11590 0.50 +0.4 2,294,841 - fieF NIAGMN_11590 0.50 +0.4 2,294,841 - fieF NIAGMN_11590 0.50 +0.6 2,294,845 + fieF NIAGMN_11590 0.50 +0.9 2,294,845 + fieF NIAGMN_11590 0.50 +0.3 2,294,846 - fieF NIAGMN_11590 0.50 +1.0 2,294,921 + fieF NIAGMN_11590 0.58 +0.4 2,294,979 - fieF NIAGMN_11590 0.65 -0.4 2,295,012 - fieF NIAGMN_11590 0.69 +0.4 2,295,012 - fieF NIAGMN_11590 0.69 +0.9 2,295,028 + fieF NIAGMN_11590 0.70 +0.4 2,295,034 + fieF NIAGMN_11590 0.71 +0.2 2,295,034 + fieF NIAGMN_11590 0.71 -0.0 2,295,034 + fieF NIAGMN_11590 0.71 +0.3 2,295,034 + fieF NIAGMN_11590 0.71 +0.1 2,295,034 + fieF NIAGMN_11590 0.71 +0.2 2,295,034 + fieF NIAGMN_11590 0.71 -0.2 2,295,035 - fieF NIAGMN_11590 0.71 +1.8 2,295,035 - fieF NIAGMN_11590 0.71 -0.9 2,295,035 - fieF NIAGMN_11590 0.71 +0.3 2,295,035 - fieF NIAGMN_11590 0.71 -0.3 2,295,035 - fieF NIAGMN_11590 0.71 -1.9 2,295,035 - fieF NIAGMN_11590 0.71 -0.1 2,295,035 - fieF NIAGMN_11590 0.71 -0.5 2,295,035 - fieF NIAGMN_11590 0.71 -0.1 2,295,198 + fieF NIAGMN_11590 0.89 +2.1 2,295,198 + fieF NIAGMN_11590 0.89 -0.5 2,295,198 + fieF NIAGMN_11590 0.89 +0.6 2,295,199 - fieF NIAGMN_11590 0.89 +0.1
Or see this region's nucleotide sequence