Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt sbmA and NIAGMN_06715 are separated by 204 nucleotides NIAGMN_06715 and ampH are separated by 45 nucleotides ampH and iprA are separated by 0 nucleotides iprA and ehaB are separated by 87 nucleotides
NIAGMN_06710: sbmA - peptide antibiotic transporter SbmA, at 1,283,093 to 1,284,313
sbmA
NIAGMN_06715: NIAGMN_06715 - hypothetical protein, at 1,284,518 to 1,284,619
_06715
NIAGMN_06720: ampH - D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH, at 1,284,665 to 1,285,822
ampH
NIAGMN_06725: iprA - hydrogen peroxide resistance inhibitor IprA, at 1,285,823 to 1,286,446
iprA
NIAGMN_06730: ehaB - autotransporter adhesin EhaB, at 1,286,534 to 1,289,476
ehaB
Position (kb) 1284
1285
1286 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1283.686 kb on + strand, within sbmA at 1283.687 kb on - strand, within sbmA at 1283.793 kb on + strand, within sbmA at 1283.793 kb on + strand, within sbmA at 1283.793 kb on + strand, within sbmA at 1283.794 kb on - strand, within sbmA at 1283.794 kb on - strand, within sbmA at 1283.797 kb on - strand, within sbmA at 1283.829 kb on + strand, within sbmA at 1283.829 kb on + strand, within sbmA at 1283.829 kb on + strand, within sbmA at 1283.830 kb on - strand, within sbmA at 1283.830 kb on - strand, within sbmA at 1283.933 kb on - strand, within sbmA at 1283.967 kb on + strand, within sbmA at 1283.967 kb on + strand, within sbmA at 1283.967 kb on + strand, within sbmA at 1283.968 kb on - strand, within sbmA at 1283.968 kb on - strand, within sbmA at 1283.979 kb on + strand, within sbmA at 1283.979 kb on + strand, within sbmA at 1283.979 kb on + strand, within sbmA at 1284.051 kb on - strand, within sbmA at 1284.081 kb on + strand, within sbmA at 1284.085 kb on + strand, within sbmA at 1284.123 kb on + strand, within sbmA at 1284.124 kb on - strand, within sbmA at 1284.124 kb on - strand, within sbmA at 1284.124 kb on - strand, within sbmA at 1284.124 kb on - strand, within sbmA at 1284.126 kb on + strand, within sbmA at 1284.127 kb on - strand, within sbmA at 1284.127 kb on - strand, within sbmA at 1284.127 kb on - strand, within sbmA at 1284.202 kb on + strand at 1284.313 kb on + strand at 1284.313 kb on + strand at 1284.314 kb on - strand at 1284.342 kb on + strand at 1284.343 kb on - strand at 1284.356 kb on + strand at 1284.357 kb on - strand at 1284.357 kb on - strand at 1284.360 kb on - strand at 1284.360 kb on - strand at 1284.414 kb on + strand at 1284.414 kb on + strand at 1284.415 kb on - strand at 1284.427 kb on - strand at 1284.427 kb on - strand at 1284.427 kb on - strand at 1284.446 kb on - strand at 1284.486 kb on - strand at 1284.486 kb on - strand at 1284.486 kb on - strand at 1284.490 kb on - strand at 1284.490 kb on - strand at 1284.499 kb on - strand at 1284.499 kb on - strand at 1284.571 kb on + strand, within NIAGMN_06715 at 1284.578 kb on - strand, within NIAGMN_06715 at 1284.578 kb on - strand, within NIAGMN_06715 at 1284.580 kb on + strand, within NIAGMN_06715 at 1284.588 kb on + strand, within NIAGMN_06715 at 1284.617 kb on + strand at 1284.617 kb on + strand at 1284.617 kb on + strand at 1284.618 kb on - strand at 1284.618 kb on - strand at 1284.620 kb on + strand at 1284.621 kb on - strand at 1284.622 kb on + strand at 1284.622 kb on + strand at 1284.622 kb on + strand at 1284.622 kb on + strand at 1284.623 kb on - strand at 1284.623 kb on - strand at 1284.623 kb on - strand at 1284.626 kb on + strand at 1284.626 kb on + strand at 1284.636 kb on + strand at 1284.636 kb on + strand at 1284.636 kb on + strand at 1284.673 kb on + strand at 1284.788 kb on - strand, within ampH at 1284.860 kb on + strand, within ampH at 1284.880 kb on + strand, within ampH at 1284.884 kb on - strand, within ampH at 1284.917 kb on - strand, within ampH at 1284.936 kb on + strand, within ampH at 1284.936 kb on + strand, within ampH at 1285.003 kb on + strand, within ampH at 1285.003 kb on + strand, within ampH at 1285.004 kb on - strand, within ampH at 1285.004 kb on - strand, within ampH at 1285.004 kb on - strand, within ampH at 1285.004 kb on - strand, within ampH at 1285.004 kb on - strand, within ampH at 1285.007 kb on + strand, within ampH at 1285.008 kb on - strand, within ampH at 1285.037 kb on + strand, within ampH at 1285.038 kb on - strand, within ampH at 1285.163 kb on + strand, within ampH at 1285.216 kb on + strand, within ampH at 1285.217 kb on - strand, within ampH at 1285.272 kb on - strand, within ampH at 1285.273 kb on + strand, within ampH at 1285.274 kb on - strand, within ampH at 1285.297 kb on + strand, within ampH at 1285.328 kb on + strand, within ampH at 1285.328 kb on + strand, within ampH at 1285.328 kb on + strand, within ampH at 1285.329 kb on - strand, within ampH at 1285.329 kb on - strand, within ampH at 1285.329 kb on - strand, within ampH at 1285.329 kb on - strand, within ampH at 1285.329 kb on - strand, within ampH at 1285.359 kb on + strand, within ampH at 1285.359 kb on + strand, within ampH at 1285.428 kb on - strand, within ampH at 1285.466 kb on + strand, within ampH at 1285.466 kb on + strand, within ampH at 1285.467 kb on - strand, within ampH at 1285.495 kb on + strand, within ampH at 1285.526 kb on + strand, within ampH at 1285.602 kb on + strand, within ampH at 1285.604 kb on + strand, within ampH at 1285.604 kb on + strand, within ampH at 1285.604 kb on + strand, within ampH at 1285.604 kb on + strand, within ampH at 1285.604 kb on + strand, within ampH at 1285.604 kb on + strand, within ampH at 1285.604 kb on + strand, within ampH at 1285.604 kb on + strand, within ampH at 1285.605 kb on - strand, within ampH at 1285.605 kb on - strand, within ampH at 1285.605 kb on - strand, within ampH at 1285.606 kb on + strand, within ampH at 1285.606 kb on + strand, within ampH at 1285.606 kb on + strand, within ampH at 1285.606 kb on + strand, within ampH at 1285.606 kb on + strand, within ampH at 1285.606 kb on + strand, within ampH at 1285.607 kb on - strand, within ampH at 1285.607 kb on - strand, within ampH at 1285.669 kb on + strand, within ampH at 1285.673 kb on + strand, within ampH at 1285.673 kb on + strand, within ampH at 1285.673 kb on + strand, within ampH at 1285.673 kb on + strand, within ampH at 1285.673 kb on + strand, within ampH at 1285.673 kb on + strand, within ampH at 1285.673 kb on + strand, within ampH at 1285.674 kb on - strand, within ampH at 1285.674 kb on - strand, within ampH at 1285.674 kb on - strand, within ampH at 1285.674 kb on - strand, within ampH at 1285.674 kb on - strand, within ampH at 1285.674 kb on - strand, within ampH at 1285.674 kb on - strand, within ampH at 1285.674 kb on - strand, within ampH at 1285.674 kb on - strand, within ampH at 1285.785 kb on + strand at 1285.824 kb on + strand at 1285.825 kb on - strand at 1285.827 kb on + strand at 1285.940 kb on - strand, within iprA at 1285.954 kb on - strand, within iprA at 1286.031 kb on + strand, within iprA at 1286.204 kb on - strand, within iprA at 1286.435 kb on + strand at 1286.496 kb on + strand at 1286.533 kb on - strand at 1286.543 kb on - strand at 1286.544 kb on + strand at 1286.545 kb on - strand at 1286.580 kb on - strand at 1286.580 kb on - strand at 1286.599 kb on - strand at 1286.599 kb on - strand at 1286.602 kb on + strand at 1286.602 kb on + strand at 1286.614 kb on - strand at 1286.680 kb on + strand at 1286.680 kb on + strand at 1286.734 kb on - strand at 1286.739 kb on + strand at 1286.740 kb on - strand at 1286.740 kb on - strand at 1286.755 kb on - strand at 1286.781 kb on + strand at 1286.782 kb on - strand at 1286.791 kb on + strand at 1286.791 kb on + strand at 1286.791 kb on + strand at 1286.792 kb on - strand at 1286.792 kb on - strand at 1286.794 kb on - strand at 1286.805 kb on - strand at 1286.805 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 1,283,686 + sbmA NIAGMN_06710 0.49 -0.6 1,283,687 - sbmA NIAGMN_06710 0.49 +0.5 1,283,793 + sbmA NIAGMN_06710 0.57 +0.5 1,283,793 + sbmA NIAGMN_06710 0.57 +0.1 1,283,793 + sbmA NIAGMN_06710 0.57 +0.3 1,283,794 - sbmA NIAGMN_06710 0.57 -0.7 1,283,794 - sbmA NIAGMN_06710 0.57 +0.4 1,283,797 - sbmA NIAGMN_06710 0.58 -0.1 1,283,829 + sbmA NIAGMN_06710 0.60 +1.0 1,283,829 + sbmA NIAGMN_06710 0.60 +0.1 1,283,829 + sbmA NIAGMN_06710 0.60 -1.5 1,283,830 - sbmA NIAGMN_06710 0.60 -0.0 1,283,830 - sbmA NIAGMN_06710 0.60 -0.4 1,283,933 - sbmA NIAGMN_06710 0.69 -0.9 1,283,967 + sbmA NIAGMN_06710 0.72 +0.2 1,283,967 + sbmA NIAGMN_06710 0.72 -1.1 1,283,967 + sbmA NIAGMN_06710 0.72 +0.6 1,283,968 - sbmA NIAGMN_06710 0.72 +0.6 1,283,968 - sbmA NIAGMN_06710 0.72 +0.6 1,283,979 + sbmA NIAGMN_06710 0.73 +1.1 1,283,979 + sbmA NIAGMN_06710 0.73 +0.2 1,283,979 + sbmA NIAGMN_06710 0.73 +0.1 1,284,051 - sbmA NIAGMN_06710 0.78 -0.5 1,284,081 + sbmA NIAGMN_06710 0.81 -0.1 1,284,085 + sbmA NIAGMN_06710 0.81 +0.4 1,284,123 + sbmA NIAGMN_06710 0.84 -0.3 1,284,124 - sbmA NIAGMN_06710 0.84 +0.1 1,284,124 - sbmA NIAGMN_06710 0.84 -0.1 1,284,124 - sbmA NIAGMN_06710 0.84 -0.6 1,284,124 - sbmA NIAGMN_06710 0.84 -0.4 1,284,126 + sbmA NIAGMN_06710 0.85 +0.1 1,284,127 - sbmA NIAGMN_06710 0.85 +0.6 1,284,127 - sbmA NIAGMN_06710 0.85 +0.8 1,284,127 - sbmA NIAGMN_06710 0.85 +0.2 1,284,202 + +0.3 1,284,313 + +0.5 1,284,313 + -1.9 1,284,314 - -0.2 1,284,342 + +1.8 1,284,343 - +0.6 1,284,356 + +1.6 1,284,357 - -0.0 1,284,357 - -0.6 1,284,360 - -1.2 1,284,360 - -0.1 1,284,414 + +1.5 1,284,414 + +0.7 1,284,415 - +0.8 1,284,427 - +0.9 1,284,427 - -0.6 1,284,427 - +0.2 1,284,446 - +0.0 1,284,486 - -1.3 1,284,486 - -0.5 1,284,486 - +0.6 1,284,490 - +0.7 1,284,490 - +1.5 1,284,499 - +0.0 1,284,499 - +0.0 1,284,571 + NIAGMN_06715 0.52 +0.5 1,284,578 - NIAGMN_06715 0.59 +0.4 1,284,578 - NIAGMN_06715 0.59 +0.3 1,284,580 + NIAGMN_06715 0.61 +1.6 1,284,588 + NIAGMN_06715 0.69 -0.7 1,284,617 + +0.8 1,284,617 + -0.3 1,284,617 + -0.3 1,284,618 - +0.5 1,284,618 - +0.7 1,284,620 + -0.4 1,284,621 - -0.0 1,284,622 + -0.6 1,284,622 + +0.1 1,284,622 + +0.2 1,284,622 + -1.0 1,284,623 - -0.0 1,284,623 - -0.3 1,284,623 - +0.6 1,284,626 + -2.0 1,284,626 + +0.5 1,284,636 + -0.3 1,284,636 + +0.3 1,284,636 + -0.3 1,284,673 + +2.1 1,284,788 - ampH NIAGMN_06720 0.11 +1.2 1,284,860 + ampH NIAGMN_06720 0.17 +0.8 1,284,880 + ampH NIAGMN_06720 0.19 -0.0 1,284,884 - ampH NIAGMN_06720 0.19 +0.8 1,284,917 - ampH NIAGMN_06720 0.22 -0.1 1,284,936 + ampH NIAGMN_06720 0.23 -1.7 1,284,936 + ampH NIAGMN_06720 0.23 +1.0 1,285,003 + ampH NIAGMN_06720 0.29 +0.4 1,285,003 + ampH NIAGMN_06720 0.29 +0.1 1,285,004 - ampH NIAGMN_06720 0.29 -0.1 1,285,004 - ampH NIAGMN_06720 0.29 +0.3 1,285,004 - ampH NIAGMN_06720 0.29 +0.2 1,285,004 - ampH NIAGMN_06720 0.29 +0.3 1,285,004 - ampH NIAGMN_06720 0.29 +2.2 1,285,007 + ampH NIAGMN_06720 0.30 -0.2 1,285,008 - ampH NIAGMN_06720 0.30 -1.5 1,285,037 + ampH NIAGMN_06720 0.32 +0.3 1,285,038 - ampH NIAGMN_06720 0.32 -2.5 1,285,163 + ampH NIAGMN_06720 0.43 +0.6 1,285,216 + ampH NIAGMN_06720 0.48 -1.0 1,285,217 - ampH NIAGMN_06720 0.48 +0.3 1,285,272 - ampH NIAGMN_06720 0.52 +0.2 1,285,273 + ampH NIAGMN_06720 0.53 +0.9 1,285,274 - ampH NIAGMN_06720 0.53 +0.7 1,285,297 + ampH NIAGMN_06720 0.55 -2.3 1,285,328 + ampH NIAGMN_06720 0.57 +0.4 1,285,328 + ampH NIAGMN_06720 0.57 -1.0 1,285,328 + ampH NIAGMN_06720 0.57 +0.4 1,285,329 - ampH NIAGMN_06720 0.57 +0.1 1,285,329 - ampH NIAGMN_06720 0.57 -0.3 1,285,329 - ampH NIAGMN_06720 0.57 -0.4 1,285,329 - ampH NIAGMN_06720 0.57 -0.3 1,285,329 - ampH NIAGMN_06720 0.57 +0.6 1,285,359 + ampH NIAGMN_06720 0.60 -0.0 1,285,359 + ampH NIAGMN_06720 0.60 -0.0 1,285,428 - ampH NIAGMN_06720 0.66 +0.2 1,285,466 + ampH NIAGMN_06720 0.69 +0.6 1,285,466 + ampH NIAGMN_06720 0.69 -0.7 1,285,467 - ampH NIAGMN_06720 0.69 -0.1 1,285,495 + ampH NIAGMN_06720 0.72 -1.1 1,285,526 + ampH NIAGMN_06720 0.74 +0.6 1,285,602 + ampH NIAGMN_06720 0.81 -2.7 1,285,604 + ampH NIAGMN_06720 0.81 -0.1 1,285,604 + ampH NIAGMN_06720 0.81 -1.7 1,285,604 + ampH NIAGMN_06720 0.81 +1.3 1,285,604 + ampH NIAGMN_06720 0.81 -0.1 1,285,604 + ampH NIAGMN_06720 0.81 +0.2 1,285,604 + ampH NIAGMN_06720 0.81 -0.9 1,285,604 + ampH NIAGMN_06720 0.81 +2.1 1,285,604 + ampH NIAGMN_06720 0.81 -0.8 1,285,605 - ampH NIAGMN_06720 0.81 +1.2 1,285,605 - ampH NIAGMN_06720 0.81 -0.7 1,285,605 - ampH NIAGMN_06720 0.81 -0.4 1,285,606 + ampH NIAGMN_06720 0.81 +0.9 1,285,606 + ampH NIAGMN_06720 0.81 +0.2 1,285,606 + ampH NIAGMN_06720 0.81 +0.3 1,285,606 + ampH NIAGMN_06720 0.81 -0.2 1,285,606 + ampH NIAGMN_06720 0.81 -0.2 1,285,606 + ampH NIAGMN_06720 0.81 -0.0 1,285,607 - ampH NIAGMN_06720 0.81 +0.3 1,285,607 - ampH NIAGMN_06720 0.81 +1.3 1,285,669 + ampH NIAGMN_06720 0.87 +0.4 1,285,673 + ampH NIAGMN_06720 0.87 -2.1 1,285,673 + ampH NIAGMN_06720 0.87 -2.2 1,285,673 + ampH NIAGMN_06720 0.87 +0.2 1,285,673 + ampH NIAGMN_06720 0.87 +0.9 1,285,673 + ampH NIAGMN_06720 0.87 -0.4 1,285,673 + ampH NIAGMN_06720 0.87 -0.1 1,285,673 + ampH NIAGMN_06720 0.87 +0.9 1,285,674 - ampH NIAGMN_06720 0.87 +0.8 1,285,674 - ampH NIAGMN_06720 0.87 -0.2 1,285,674 - ampH NIAGMN_06720 0.87 +0.1 1,285,674 - ampH NIAGMN_06720 0.87 -0.1 1,285,674 - ampH NIAGMN_06720 0.87 +0.1 1,285,674 - ampH NIAGMN_06720 0.87 +0.7 1,285,674 - ampH NIAGMN_06720 0.87 -0.7 1,285,674 - ampH NIAGMN_06720 0.87 -0.2 1,285,674 - ampH NIAGMN_06720 0.87 -0.0 1,285,785 + -1.5 1,285,824 + -0.3 1,285,825 - +0.3 1,285,827 + +0.2 1,285,940 - iprA NIAGMN_06725 0.19 -0.9 1,285,954 - iprA NIAGMN_06725 0.21 +1.5 1,286,031 + iprA NIAGMN_06725 0.33 -0.3 1,286,204 - iprA NIAGMN_06725 0.61 -1.3 1,286,435 + -0.1 1,286,496 + +0.4 1,286,533 - +2.4 1,286,543 - -0.2 1,286,544 + -1.1 1,286,545 - -0.4 1,286,580 - +0.7 1,286,580 - +0.3 1,286,599 - -0.1 1,286,599 - -0.0 1,286,602 + +0.2 1,286,602 + -0.3 1,286,614 - +0.6 1,286,680 + -0.3 1,286,680 + -0.8 1,286,734 - +0.2 1,286,739 + -0.1 1,286,740 - -1.3 1,286,740 - -0.1 1,286,755 - +0.3 1,286,781 + +0.1 1,286,782 - -1.7 1,286,791 + -0.3 1,286,791 + -0.4 1,286,791 + -0.4 1,286,792 - -0.3 1,286,792 - +0.8 1,286,794 - -0.0 1,286,805 - +0.5 1,286,805 - +0.6
Or see this region's nucleotide sequence