Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mukB and mukE overlap by 1 nucleotides mukE and mukF overlap by 20 nucleotides mukF and cmoM overlap by 4 nucleotides cmoM and elyC are separated by 135 nucleotides
MCAODC_24795: mukB - chromosome partition protein MukB, at 1,670,284 to 1,674,744
mukB
MCAODC_24800: mukE - chromosome partition protein MukE, at 1,674,744 to 1,675,448
mukE
MCAODC_24805: mukF - chromosome partition protein MukF, at 1,675,429 to 1,676,751
mukF
MCAODC_24810: cmoM - tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM, at 1,676,748 to 1,677,533
cmoM
MCAODC_24815: elyC - envelope biogenesis factor ElyC, at 1,677,669 to 1,678,448
elyC
Position (kb)
1675
1676
1677 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1676.793 kb on - strand at 1676.793 kb on - strand at 1676.793 kb on - strand at 1676.795 kb on - strand at 1676.808 kb on - strand at 1676.811 kb on - strand at 1676.811 kb on - strand at 1676.811 kb on - strand at 1676.813 kb on - strand at 1676.813 kb on - strand at 1676.813 kb on - strand at 1676.813 kb on - strand at 1676.813 kb on - strand at 1676.842 kb on - strand, within cmoM at 1676.842 kb on - strand, within cmoM at 1676.842 kb on - strand, within cmoM at 1676.851 kb on - strand, within cmoM at 1676.851 kb on - strand, within cmoM at 1676.861 kb on - strand, within cmoM at 1676.894 kb on - strand, within cmoM at 1676.922 kb on - strand, within cmoM at 1676.928 kb on - strand, within cmoM at 1676.960 kb on - strand, within cmoM at 1676.960 kb on - strand, within cmoM at 1676.960 kb on - strand, within cmoM at 1677.060 kb on - strand, within cmoM at 1677.060 kb on - strand, within cmoM at 1677.060 kb on - strand, within cmoM at 1677.060 kb on - strand, within cmoM at 1677.243 kb on - strand, within cmoM at 1677.243 kb on - strand, within cmoM at 1677.322 kb on - strand, within cmoM at 1677.482 kb on - strand at 1677.482 kb on - strand at 1677.489 kb on - strand at 1677.619 kb on - strand at 1677.619 kb on - strand at 1677.619 kb on - strand at 1677.619 kb on - strand at 1677.621 kb on + strand at 1677.621 kb on + strand at 1677.622 kb on - strand at 1677.622 kb on - strand at 1677.622 kb on - strand at 1677.641 kb on + strand at 1677.641 kb on + strand at 1677.641 kb on + strand at 1677.641 kb on + strand at 1677.642 kb on - strand at 1677.642 kb on - strand at 1677.642 kb on - strand at 1677.642 kb on - strand at 1677.642 kb on - strand at 1677.642 kb on - strand at 1677.643 kb on + strand at 1677.643 kb on + strand at 1677.643 kb on + strand at 1677.644 kb on - strand at 1677.644 kb on - strand at 1677.677 kb on + strand at 1677.678 kb on - strand at 1677.678 kb on - strand at 1677.701 kb on + strand at 1677.730 kb on + strand at 1677.730 kb on + strand at 1677.731 kb on - strand at 1677.731 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 1,676,793 - -2.2 1,676,793 - +0.7 1,676,793 - +0.5 1,676,795 - +0.3 1,676,808 - -0.0 1,676,811 - +0.6 1,676,811 - +0.8 1,676,811 - -0.9 1,676,813 - -2.2 1,676,813 - +0.4 1,676,813 - +0.2 1,676,813 - +1.3 1,676,813 - +0.5 1,676,842 - cmoM MCAODC_24810 0.12 -0.6 1,676,842 - cmoM MCAODC_24810 0.12 +0.5 1,676,842 - cmoM MCAODC_24810 0.12 -0.4 1,676,851 - cmoM MCAODC_24810 0.13 +0.3 1,676,851 - cmoM MCAODC_24810 0.13 +0.4 1,676,861 - cmoM MCAODC_24810 0.14 +0.7 1,676,894 - cmoM MCAODC_24810 0.19 +0.9 1,676,922 - cmoM MCAODC_24810 0.22 +1.2 1,676,928 - cmoM MCAODC_24810 0.23 -1.2 1,676,960 - cmoM MCAODC_24810 0.27 -0.8 1,676,960 - cmoM MCAODC_24810 0.27 -0.2 1,676,960 - cmoM MCAODC_24810 0.27 -0.9 1,677,060 - cmoM MCAODC_24810 0.40 -0.3 1,677,060 - cmoM MCAODC_24810 0.40 +0.2 1,677,060 - cmoM MCAODC_24810 0.40 -0.3 1,677,060 - cmoM MCAODC_24810 0.40 -0.2 1,677,243 - cmoM MCAODC_24810 0.63 +0.8 1,677,243 - cmoM MCAODC_24810 0.63 +0.7 1,677,322 - cmoM MCAODC_24810 0.73 +0.2 1,677,482 - -0.3 1,677,482 - -0.7 1,677,489 - +0.6 1,677,619 - +0.5 1,677,619 - +0.9 1,677,619 - -1.8 1,677,619 - -0.2 1,677,621 + -0.3 1,677,621 + +2.0 1,677,622 - -1.3 1,677,622 - -2.4 1,677,622 - -0.2 1,677,641 + +1.1 1,677,641 + -0.2 1,677,641 + -0.0 1,677,641 + -0.1 1,677,642 - +1.0 1,677,642 - +1.1 1,677,642 - +1.8 1,677,642 - +0.2 1,677,642 - -3.0 1,677,642 - +0.1 1,677,643 + -0.8 1,677,643 + +0.7 1,677,643 + -1.0 1,677,644 - +0.4 1,677,644 - -0.9 1,677,677 + -1.0 1,677,678 - -1.2 1,677,678 - -2.3 1,677,701 + +0.5 1,677,730 + -0.5 1,677,730 + -0.2 1,677,731 - -0.5 1,677,731 - +0.3
Or see this region's nucleotide sequence