Strain Fitness in Escherichia coli ECRC101 around MCAODC_04565
Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Glucose |
---|---|---|---|---|---|
remove | |||||
924,995 | - | yihO | MCAODC_04560 | 0.29 | +0.6 |
925,076 | + | yihO | MCAODC_04560 | 0.35 | -0.6 |
925,082 | + | yihO | MCAODC_04560 | 0.35 | -1.9 |
925,082 | + | yihO | MCAODC_04560 | 0.35 | +1.0 |
925,093 | - | yihO | MCAODC_04560 | 0.36 | +0.3 |
925,093 | - | yihO | MCAODC_04560 | 0.36 | +0.4 |
925,104 | + | yihO | MCAODC_04560 | 0.37 | +0.5 |
925,104 | + | yihO | MCAODC_04560 | 0.37 | +1.4 |
925,188 | + | yihO | MCAODC_04560 | 0.43 | +0.6 |
925,188 | + | yihO | MCAODC_04560 | 0.43 | +1.7 |
925,201 | + | yihO | MCAODC_04560 | 0.44 | -0.4 |
925,223 | - | yihO | MCAODC_04560 | 0.45 | +0.6 |
925,248 | + | yihO | MCAODC_04560 | 0.47 | +0.9 |
925,248 | + | yihO | MCAODC_04560 | 0.47 | +1.0 |
925,249 | - | yihO | MCAODC_04560 | 0.47 | +0.1 |
925,258 | - | yihO | MCAODC_04560 | 0.48 | -0.4 |
925,370 | - | yihO | MCAODC_04560 | 0.56 | +2.0 |
925,392 | + | yihO | MCAODC_04560 | 0.57 | +1.4 |
925,463 | + | yihO | MCAODC_04560 | 0.62 | -0.4 |
925,464 | - | yihO | MCAODC_04560 | 0.63 | -0.2 |
925,499 | + | yihO | MCAODC_04560 | 0.65 | -1.9 |
925,540 | + | yihO | MCAODC_04560 | 0.68 | -0.4 |
925,585 | - | yihO | MCAODC_04560 | 0.71 | +2.0 |
925,611 | - | yihO | MCAODC_04560 | 0.73 | +0.4 |
925,611 | - | yihO | MCAODC_04560 | 0.73 | +0.6 |
925,646 | + | yihO | MCAODC_04560 | 0.75 | +0.1 |
925,647 | - | yihO | MCAODC_04560 | 0.76 | +0.3 |
925,651 | + | yihO | MCAODC_04560 | 0.76 | +2.2 |
925,702 | + | yihO | MCAODC_04560 | 0.79 | -0.1 |
925,704 | + | yihO | MCAODC_04560 | 0.80 | -1.0 |
925,705 | - | yihO | MCAODC_04560 | 0.80 | -0.2 |
925,705 | - | yihO | MCAODC_04560 | 0.80 | +0.4 |
925,809 | - | yihO | MCAODC_04560 | 0.87 | -1.4 |
925,917 | + | -0.1 | |||
925,986 | - | +1.7 | |||
926,143 | + | ompL | MCAODC_04565 | 0.20 | +0.7 |
926,144 | - | ompL | MCAODC_04565 | 0.20 | +3.6 |
926,145 | + | ompL | MCAODC_04565 | 0.20 | +0.4 |
926,177 | + | ompL | MCAODC_04565 | 0.25 | +0.2 |
926,178 | - | ompL | MCAODC_04565 | 0.25 | +1.1 |
926,190 | + | ompL | MCAODC_04565 | 0.26 | +0.1 |
926,214 | + | ompL | MCAODC_04565 | 0.30 | -1.1 |
926,215 | - | ompL | MCAODC_04565 | 0.30 | -1.3 |
926,226 | + | ompL | MCAODC_04565 | 0.31 | -0.0 |
926,340 | + | ompL | MCAODC_04565 | 0.46 | +0.2 |
926,385 | + | ompL | MCAODC_04565 | 0.52 | -1.5 |
926,398 | - | ompL | MCAODC_04565 | 0.54 | -0.3 |
926,442 | + | ompL | MCAODC_04565 | 0.60 | -3.1 |
926,447 | - | ompL | MCAODC_04565 | 0.60 | -2.4 |
926,492 | - | ompL | MCAODC_04565 | 0.66 | +0.6 |
926,542 | - | ompL | MCAODC_04565 | 0.73 | -0.7 |
926,564 | - | ompL | MCAODC_04565 | 0.76 | -1.3 |
926,619 | + | ompL | MCAODC_04565 | 0.83 | -0.3 |
926,620 | - | ompL | MCAODC_04565 | 0.83 | -0.9 |
926,640 | + | ompL | MCAODC_04565 | 0.86 | -0.4 |
926,659 | + | ompL | MCAODC_04565 | 0.88 | -0.1 |
926,659 | + | ompL | MCAODC_04565 | 0.88 | -1.0 |
926,659 | + | ompL | MCAODC_04565 | 0.88 | -1.4 |
926,661 | + | ompL | MCAODC_04565 | 0.88 | -0.0 |
926,662 | - | ompL | MCAODC_04565 | 0.89 | +0.7 |
926,679 | - | -0.1 | |||
926,679 | - | +0.7 | |||
926,737 | + | +0.8 | |||
926,738 | - | +0.3 | |||
926,824 | - | -2.8 | |||
926,824 | - | -0.0 | |||
926,836 | + | +1.8 | |||
926,840 | + | +0.7 | |||
926,840 | + | +0.6 | |||
926,868 | + | +0.2 | |||
926,868 | + | -0.3 | |||
926,868 | + | +0.2 | |||
926,868 | + | -0.7 | |||
926,869 | - | -0.1 | |||
926,869 | - | +2.6 | |||
926,877 | + | +0.3 | |||
926,880 | + | +1.1 | |||
926,881 | - | -0.1 | |||
926,896 | + | -0.1 | |||
926,954 | + | -0.2 | |||
926,988 | - | yihN | MCAODC_04570 | 0.12 | -1.5 |
926,988 | - | yihN | MCAODC_04570 | 0.12 | +0.4 |
926,994 | - | yihN | MCAODC_04570 | 0.12 | +0.6 |
927,090 | + | yihN | MCAODC_04570 | 0.20 | -0.5 |
927,090 | + | yihN | MCAODC_04570 | 0.20 | -0.7 |
927,090 | + | yihN | MCAODC_04570 | 0.20 | -0.9 |
927,117 | + | yihN | MCAODC_04570 | 0.22 | +0.9 |
927,118 | - | yihN | MCAODC_04570 | 0.22 | +1.8 |
927,144 | + | yihN | MCAODC_04570 | 0.24 | +1.5 |
927,144 | + | yihN | MCAODC_04570 | 0.24 | -2.7 |
927,145 | - | yihN | MCAODC_04570 | 0.24 | -3.0 |
927,145 | - | yihN | MCAODC_04570 | 0.24 | +0.2 |
927,145 | - | yihN | MCAODC_04570 | 0.24 | +0.4 |
927,161 | + | yihN | MCAODC_04570 | 0.25 | -1.3 |
927,171 | + | yihN | MCAODC_04570 | 0.26 | +0.8 |
927,190 | - | yihN | MCAODC_04570 | 0.28 | +0.4 |
927,223 | - | yihN | MCAODC_04570 | 0.30 | +1.1 |
927,230 | + | yihN | MCAODC_04570 | 0.31 | +1.3 |
927,230 | + | yihN | MCAODC_04570 | 0.31 | +0.4 |
927,230 | + | yihN | MCAODC_04570 | 0.31 | +1.5 |
927,231 | - | yihN | MCAODC_04570 | 0.31 | +0.1 |
927,235 | + | yihN | MCAODC_04570 | 0.31 | +0.0 |
927,235 | + | yihN | MCAODC_04570 | 0.31 | -0.2 |
927,235 | + | yihN | MCAODC_04570 | 0.31 | +0.4 |
927,235 | + | yihN | MCAODC_04570 | 0.31 | -1.9 |
927,235 | + | yihN | MCAODC_04570 | 0.31 | +0.4 |
927,236 | - | yihN | MCAODC_04570 | 0.31 | +0.5 |
927,236 | - | yihN | MCAODC_04570 | 0.31 | +0.6 |
927,236 | - | yihN | MCAODC_04570 | 0.31 | +0.7 |
927,236 | - | yihN | MCAODC_04570 | 0.31 | -0.9 |
927,236 | - | yihN | MCAODC_04570 | 0.31 | +1.3 |
927,239 | + | yihN | MCAODC_04570 | 0.32 | +0.7 |
927,239 | + | yihN | MCAODC_04570 | 0.32 | +1.2 |
927,240 | - | yihN | MCAODC_04570 | 0.32 | +0.3 |
927,311 | + | yihN | MCAODC_04570 | 0.37 | +0.0 |
927,330 | - | yihN | MCAODC_04570 | 0.39 | +0.2 |
927,355 | + | yihN | MCAODC_04570 | 0.41 | -0.7 |
927,355 | + | yihN | MCAODC_04570 | 0.41 | -0.3 |
927,355 | + | yihN | MCAODC_04570 | 0.41 | +2.2 |
927,355 | + | yihN | MCAODC_04570 | 0.41 | +1.7 |
927,356 | - | yihN | MCAODC_04570 | 0.41 | -0.3 |
927,359 | + | yihN | MCAODC_04570 | 0.41 | +0.0 |
927,359 | + | yihN | MCAODC_04570 | 0.41 | +0.7 |
927,360 | - | yihN | MCAODC_04570 | 0.41 | +0.3 |
927,360 | - | yihN | MCAODC_04570 | 0.41 | -0.0 |
927,360 | - | yihN | MCAODC_04570 | 0.41 | -2.4 |
927,401 | + | yihN | MCAODC_04570 | 0.44 | +0.9 |
927,435 | + | yihN | MCAODC_04570 | 0.47 | +0.2 |
927,445 | - | yihN | MCAODC_04570 | 0.48 | -0.4 |
927,471 | + | yihN | MCAODC_04570 | 0.50 | +0.4 |
927,553 | - | yihN | MCAODC_04570 | 0.56 | -0.0 |
927,555 | + | yihN | MCAODC_04570 | 0.57 | +0.8 |
927,584 | + | yihN | MCAODC_04570 | 0.59 | +0.2 |
927,585 | - | yihN | MCAODC_04570 | 0.59 | +0.1 |
927,603 | + | yihN | MCAODC_04570 | 0.60 | +0.1 |
927,611 | - | yihN | MCAODC_04570 | 0.61 | -0.7 |
927,613 | + | yihN | MCAODC_04570 | 0.61 | +0.9 |
927,614 | - | yihN | MCAODC_04570 | 0.61 | -0.5 |
927,614 | - | yihN | MCAODC_04570 | 0.61 | +0.4 |
927,633 | + | yihN | MCAODC_04570 | 0.63 | +0.2 |
927,633 | + | yihN | MCAODC_04570 | 0.63 | -0.4 |
927,634 | - | yihN | MCAODC_04570 | 0.63 | +1.1 |
Or see this region's nucleotide sequence