Strain Fitness in Escherichia coli ECRC101 around MCAODC_00750

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntmap and glnD are separated by 61 nucleotidesglnD and dapD are separated by 30 nucleotides MCAODC_00745: map - type I methionyl aminopeptidase, at 124,218 to 125,012 map MCAODC_00750: glnD - bifunctional uridylyltransferase/uridylyl-removing protein GlnD, at 125,074 to 127,746 glnD MCAODC_00755: dapD - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 127,777 to 128,601 dapD Position (kb) 125 126 127 128Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 124.091 kb on - strandat 124.093 kb on + strandat 124.094 kb on - strandat 124.095 kb on + strandat 124.095 kb on + strandat 124.096 kb on - strandat 124.096 kb on - strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 125.048 kb on + strandat 125.053 kb on + strandat 125.181 kb on - strandat 127.737 kb on + strandat 127.753 kb on + strandat 127.753 kb on + strandat 127.759 kb on + strandat 127.772 kb on + strandat 128.606 kb on - strandat 128.653 kb on + strandat 128.664 kb on - strandat 128.689 kb on - strandat 128.689 kb on - strandat 128.722 kb on + strandat 128.723 kb on - strandat 128.740 kb on + strandat 128.740 kb on + strandat 128.741 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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124,091 - -0.1
124,093 + -0.1
124,094 - +1.5
124,095 + +1.1
124,095 + +0.5
124,096 - -0.1
124,096 - +0.5
124,178 + -3.3
124,178 + -1.3
124,178 + -0.5
124,178 + +0.7
124,178 + -0.2
124,178 + -0.2
124,178 + -0.4
124,178 + +0.6
124,178 + -0.2
124,178 + +0.7
124,178 + +0.2
124,178 + -2.0
124,178 + +0.7
124,179 - -0.1
124,179 - +0.4
124,179 - +1.7
124,179 - +0.9
124,179 - +0.4
124,179 - +0.6
124,179 - -1.2
124,179 - +0.8
124,179 - +0.0
124,179 - -1.2
124,179 - +1.6
124,179 - +1.4
124,179 - +0.3
124,179 - +0.1
125,048 + +0.4
125,053 + +0.5
125,181 - +0.1
127,737 + +0.7
127,753 + +0.1
127,753 + +0.8
127,759 + +0.6
127,772 + -2.6
128,606 - -1.7
128,653 + +2.4
128,664 - -0.6
128,689 - +0.0
128,689 - +1.7
128,722 + -0.2
128,723 - +1.2
128,740 + -0.3
128,740 + +0.2
128,741 - -0.3

Or see this region's nucleotide sequence