Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15470

Experiment: Biofilm; Day2; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; pH7
3,379,525	+		LRK53_RS15460	0.84	+0.3
3,379,526	-		LRK53_RS15460	0.84	+1.8
3,379,526	-		LRK53_RS15460	0.84	-0.5
3,379,638	+				+0.7
3,379,638	+				-0.7
3,379,638	+				-0.1
3,379,638	+				-0.8
3,379,639	-				+0.0
3,379,639	-				-0.6
3,379,639	-				-0.0
3,379,639	-				-1.0
3,379,639	-				-0.6
3,379,639	-				-0.4
3,379,640	+				+0.3
3,379,640	+				-0.6
3,379,640	+				+0.1
3,379,640	+				-0.4
3,379,640	+				-0.1
3,379,640	+				-1.5
3,379,641	-				-0.7
3,379,641	-				-0.8
3,379,641	-				-0.2
3,379,641	-				-1.5
3,379,915	+		LRK53_RS15465	0.24	-0.9
3,379,915	+		LRK53_RS15465	0.24	+0.5
3,379,941	+		LRK53_RS15465	0.30	-1.1
3,379,941	+		LRK53_RS15465	0.30	+0.7
3,379,941	+		LRK53_RS15465	0.30	-1.5
3,379,941	+		LRK53_RS15465	0.30	-1.4
3,379,941	+		LRK53_RS15465	0.30	-2.2
3,379,941	+		LRK53_RS15465	0.30	-1.5
3,379,942	-		LRK53_RS15465	0.31	-0.9
3,379,942	-		LRK53_RS15465	0.31	-0.0
3,379,942	-		LRK53_RS15465	0.31	-0.2
3,379,942	-		LRK53_RS15465	0.31	+0.5
3,379,942	-		LRK53_RS15465	0.31	-0.6
3,379,943	+		LRK53_RS15465	0.31	-0.7
3,379,943	+		LRK53_RS15465	0.31	+0.2
3,379,943	+		LRK53_RS15465	0.31	+0.1
3,379,943	+		LRK53_RS15465	0.31	+0.3
3,379,943	+		LRK53_RS15465	0.31	+1.0
3,379,943	+		LRK53_RS15465	0.31	-0.5
3,379,944	-		LRK53_RS15465	0.31	+0.2
3,379,944	-		LRK53_RS15465	0.31	-0.2
3,379,944	-		LRK53_RS15465	0.31	-0.6
3,379,944	-		LRK53_RS15465	0.31	-0.3
3,379,944	-		LRK53_RS15465	0.31	+1.0
3,379,944	-		LRK53_RS15465	0.31	-0.8
3,379,944	-		LRK53_RS15465	0.31	-0.3
3,379,944	-		LRK53_RS15465	0.31	-0.7
3,379,944	-		LRK53_RS15465	0.31	+1.3
3,380,052	+		LRK53_RS15465	0.56	-0.7
3,380,053	-		LRK53_RS15465	0.56	-0.4
3,380,053	-		LRK53_RS15465	0.56	-1.2
3,380,053	-		LRK53_RS15465	0.56	-0.8
3,380,118	+		LRK53_RS15465	0.71	-0.3
3,380,118	+		LRK53_RS15465	0.71	-1.0
3,380,118	+		LRK53_RS15465	0.71	+0.5
3,380,118	+		LRK53_RS15465	0.71	-1.2
3,380,118	+		LRK53_RS15465	0.71	-2.0
3,380,118	+		LRK53_RS15465	0.71	+0.1
3,380,118	+		LRK53_RS15465	0.71	+0.2
3,380,118	+		LRK53_RS15465	0.71	+1.6
3,380,118	+		LRK53_RS15465	0.71	+0.2
3,380,119	-		LRK53_RS15465	0.71	-1.1
3,380,238	+				-0.3
3,380,238	+				-1.0
3,380,238	+				-0.4
3,380,238	+				+0.0
3,380,238	+				+0.3
3,380,239	-				-2.1
3,380,239	-				-0.2
3,380,239	-				-2.0
3,380,239	-				-0.7
3,380,239	-				+0.9
3,380,241	+				-0.1
3,380,242	-				-2.0
3,380,242	-				-0.9
3,380,284	-				-0.3
3,380,284	-				-0.5
3,380,284	-				-0.0
3,380,284	-				-0.4
3,380,496	+		LRK53_RS15470	0.10	-0.0
3,380,496	+		LRK53_RS15470	0.10	+0.9
3,380,496	+		LRK53_RS15470	0.10	-0.8
3,380,496	+		LRK53_RS15470	0.10	+0.0
3,380,496	+		LRK53_RS15470	0.10	-1.0
3,380,496	+		LRK53_RS15470	0.10	-0.0
3,380,496	+		LRK53_RS15470	0.10	-2.7
3,380,496	+		LRK53_RS15470	0.10	-0.2
3,380,496	+		LRK53_RS15470	0.10	-0.8
3,380,496	+		LRK53_RS15470	0.10	-1.2
3,380,496	+		LRK53_RS15470	0.10	-0.3
3,380,496	+		LRK53_RS15470	0.10	-0.2
3,380,497	-		LRK53_RS15470	0.10	-0.9
3,380,497	-		LRK53_RS15470	0.10	-0.4
3,380,497	-		LRK53_RS15470	0.10	-0.2
3,380,497	-		LRK53_RS15470	0.10	-1.2
3,380,497	-		LRK53_RS15470	0.10	-1.4
3,380,503	+		LRK53_RS15470	0.11	-0.5
3,380,874	+		LRK53_RS15470	0.33	+0.2
3,380,874	+		LRK53_RS15470	0.33	-1.5
3,380,874	+		LRK53_RS15470	0.33	-3.0
3,380,874	+		LRK53_RS15470	0.33	-1.3
3,380,874	+		LRK53_RS15470	0.33	-0.6
3,380,874	+		LRK53_RS15470	0.33	+0.6
3,380,874	+		LRK53_RS15470	0.33	-1.0
3,380,874	+		LRK53_RS15470	0.33	-1.7
3,380,874	+		LRK53_RS15470	0.33	-1.4
3,380,874	+		LRK53_RS15470	0.33	-1.2
3,380,874	+		LRK53_RS15470	0.33	+0.8
3,380,874	+		LRK53_RS15470	0.33	-0.2
3,380,874	+		LRK53_RS15470	0.33	-0.2
3,380,874	+		LRK53_RS15470	0.33	+1.3
3,380,874	+		LRK53_RS15470	0.33	-1.0
3,380,874	+		LRK53_RS15470	0.33	-1.0
3,380,874	+		LRK53_RS15470	0.33	-1.3
3,380,874	+		LRK53_RS15470	0.33	-1.5
3,380,874	+		LRK53_RS15470	0.33	-1.1
3,380,874	+		LRK53_RS15470	0.33	-0.6
3,380,875	-		LRK53_RS15470	0.33	-0.4
3,380,875	-		LRK53_RS15470	0.33	-0.1
3,380,875	-		LRK53_RS15470	0.33	-0.4
3,380,875	-		LRK53_RS15470	0.33	+1.2
3,380,875	-		LRK53_RS15470	0.33	-0.6
3,380,875	-		LRK53_RS15470	0.33	-0.1
3,380,875	-		LRK53_RS15470	0.33	-0.2
3,380,875	-		LRK53_RS15470	0.33	-0.7
3,380,875	-		LRK53_RS15470	0.33	-0.5
3,380,875	-		LRK53_RS15470	0.33	+0.8
3,380,875	-		LRK53_RS15470	0.33	+0.9
3,380,875	-		LRK53_RS15470	0.33	-2.6
3,380,875	-		LRK53_RS15470	0.33	+0.5
3,380,877	+		LRK53_RS15470	0.33	-0.2
3,380,877	+		LRK53_RS15470	0.33	-1.8
3,380,877	+		LRK53_RS15470	0.33	+1.2
3,380,877	+		LRK53_RS15470	0.33	+0.2
3,380,878	-		LRK53_RS15470	0.33	-1.7
3,380,878	-		LRK53_RS15470	0.33	+0.6
3,380,892	+		LRK53_RS15470	0.34	+0.6
3,380,892	+		LRK53_RS15470	0.34	-0.9
3,380,892	+		LRK53_RS15470	0.34	+2.1
3,380,892	+		LRK53_RS15470	0.34	-0.0
3,380,892	+		LRK53_RS15470	0.34	-1.1
3,380,892	+		LRK53_RS15470	0.34	+0.2
3,380,892	+		LRK53_RS15470	0.34	-0.3
3,380,892	+		LRK53_RS15470	0.34	+0.1
3,380,892	+		LRK53_RS15470	0.34	-0.7
3,380,892	+		LRK53_RS15470	0.34	-1.0
3,380,892	+		LRK53_RS15470	0.34	+1.4
3,380,892	+		LRK53_RS15470	0.34	+1.0
3,380,892	+		LRK53_RS15470	0.34	-0.5
3,380,892	+		LRK53_RS15470	0.34	+0.9
3,380,892	+		LRK53_RS15470	0.34	+0.8
3,380,892	+		LRK53_RS15470	0.34	-0.8
3,380,892	+		LRK53_RS15470	0.34	+0.6
3,380,892	+		LRK53_RS15470	0.34	-2.0
3,380,892	+		LRK53_RS15470	0.34	-0.1
3,380,892	+		LRK53_RS15470	0.34	-0.8
3,380,893	-		LRK53_RS15470	0.34	-1.1
3,380,893	-		LRK53_RS15470	0.34	+0.8
3,380,893	-		LRK53_RS15470	0.34	-2.6
3,380,893	-		LRK53_RS15470	0.34	+1.0
3,380,893	-		LRK53_RS15470	0.34	+0.6
3,380,893	-		LRK53_RS15470	0.34	-1.2
3,380,893	-		LRK53_RS15470	0.34	-2.1
3,380,893	-		LRK53_RS15470	0.34	+0.3
3,380,893	-		LRK53_RS15470	0.34	+0.2
3,380,893	-		LRK53_RS15470	0.34	-1.4
3,380,893	-		LRK53_RS15470	0.34	+1.6
3,380,893	-		LRK53_RS15470	0.34	-0.4
3,380,893	-		LRK53_RS15470	0.34	-0.4
3,380,893	-		LRK53_RS15470	0.34	-0.1
3,380,893	-		LRK53_RS15470	0.34	+0.3
3,380,893	-		LRK53_RS15470	0.34	+0.5
3,380,893	-		LRK53_RS15470	0.34	-1.0
3,380,893	-		LRK53_RS15470	0.34	-1.0
3,380,893	-		LRK53_RS15470	0.34	-1.1
3,380,893	-		LRK53_RS15470	0.34	-0.3
3,380,898	+		LRK53_RS15470	0.35	-0.6
3,380,898	+		LRK53_RS15470	0.35	+0.7
3,380,898	+		LRK53_RS15470	0.35	-0.5
3,380,898	+		LRK53_RS15470	0.35	-0.4
3,380,898	+		LRK53_RS15470	0.35	+0.6
3,380,899	-		LRK53_RS15470	0.35	-1.2
3,380,899	-		LRK53_RS15470	0.35	+0.1
3,380,899	-		LRK53_RS15470	0.35	-1.2
3,380,899	-		LRK53_RS15470	0.35	+0.4
3,380,964	+		LRK53_RS15470	0.39	-0.8
3,380,964	+		LRK53_RS15470	0.39	-0.0
3,380,964	+		LRK53_RS15470	0.39	+1.2
3,380,964	+		LRK53_RS15470	0.39	+0.9
3,381,226	+		LRK53_RS15470	0.55	-0.6
3,381,226	+		LRK53_RS15470	0.55	-1.3
3,381,226	+		LRK53_RS15470	0.55	+1.7
3,381,226	+		LRK53_RS15470	0.55	-1.0
3,381,226	+		LRK53_RS15470	0.55	-1.2
3,381,226	+		LRK53_RS15470	0.55	-0.3
3,381,226	+		LRK53_RS15470	0.55	-0.3
3,381,226	+		LRK53_RS15470	0.55	+0.5
3,381,226	+		LRK53_RS15470	0.55	-0.1
3,381,226	+		LRK53_RS15470	0.55	+1.6
3,381,226	+		LRK53_RS15470	0.55	+1.0
3,381,226	+		LRK53_RS15470	0.55	+0.8
3,381,226	+		LRK53_RS15470	0.55	-0.2
3,381,226	+		LRK53_RS15470	0.55	-0.4
3,381,226	+		LRK53_RS15470	0.55	-1.9
3,381,226	+		LRK53_RS15470	0.55	+0.5
3,381,227	-		LRK53_RS15470	0.55	-2.4
3,381,227	-		LRK53_RS15470	0.55	+0.2
3,381,227	-		LRK53_RS15470	0.55	+0.7
3,381,227	-		LRK53_RS15470	0.55	-0.6
3,381,227	-		LRK53_RS15470	0.55	+0.6
3,381,227	-		LRK53_RS15470	0.55	-0.5
3,381,227	-		LRK53_RS15470	0.55	-1.8
3,381,227	-		LRK53_RS15470	0.55	+0.6
3,381,227	-		LRK53_RS15470	0.55	+1.0
3,381,227	-		LRK53_RS15470	0.55	+0.3
3,381,227	-		LRK53_RS15470	0.55	-1.0
3,381,227	-		LRK53_RS15470	0.55	+0.2
3,381,227	-		LRK53_RS15470	0.55	-0.9
3,381,227	-		LRK53_RS15470	0.55	+2.4
3,381,270	+		LRK53_RS15470	0.57	+0.1
3,381,270	+		LRK53_RS15470	0.57	-0.7
3,381,270	+		LRK53_RS15470	0.57	+0.4
3,381,270	+		LRK53_RS15470	0.57	+0.5
3,381,270	+		LRK53_RS15470	0.57	-1.1
3,381,270	+		LRK53_RS15470	0.57	+1.6
3,381,271	-		LRK53_RS15470	0.57	-0.2
3,381,271	-		LRK53_RS15470	0.57	-1.7
3,381,271	-		LRK53_RS15470	0.57	-0.4
3,381,271	-		LRK53_RS15470	0.57	-0.1
3,381,330	+		LRK53_RS15470	0.61	+0.8
3,381,330	+		LRK53_RS15470	0.61	+0.8
3,381,330	+		LRK53_RS15470	0.61	-1.5
3,381,330	+		LRK53_RS15470	0.61	+0.5
3,381,331	-		LRK53_RS15470	0.61	-0.8
3,381,331	-		LRK53_RS15470	0.61	-1.5
3,381,331	-		LRK53_RS15470	0.61	-1.8
3,381,331	-		LRK53_RS15470	0.61	-0.1
3,381,331	-		LRK53_RS15470	0.61	+0.1
3,381,471	+		LRK53_RS15470	0.69	-1.2
3,381,471	+		LRK53_RS15470	0.69	-0.8
3,381,471	+		LRK53_RS15470	0.69	+0.6
3,381,471	+		LRK53_RS15470	0.69	+0.2
3,381,471	+		LRK53_RS15470	0.69	-0.2
3,381,472	-		LRK53_RS15470	0.69	-0.8
3,381,474	+		LRK53_RS15470	0.70	+1.9
3,381,474	+		LRK53_RS15470	0.70	+0.2
3,381,474	+		LRK53_RS15470	0.70	+0.2
3,381,474	+		LRK53_RS15470	0.70	-0.7
3,381,474	+		LRK53_RS15470	0.70	+0.1
3,381,474	+		LRK53_RS15470	0.70	-1.8
3,381,475	-		LRK53_RS15470	0.70	-0.9
3,381,475	-		LRK53_RS15470	0.70	+1.2
3,381,475	-		LRK53_RS15470	0.70	-0.2
3,381,475	-		LRK53_RS15470	0.70	-0.2
3,381,492	+		LRK53_RS15470	0.71	-1.4
3,381,493	-		LRK53_RS15470	0.71	-0.9
3,381,493	-		LRK53_RS15470	0.71	+1.7
3,381,624	+		LRK53_RS15470	0.79	+2.2
3,381,624	+		LRK53_RS15470	0.79	-0.9
3,381,624	+		LRK53_RS15470	0.79	+0.2
3,381,625	-		LRK53_RS15470	0.79	-0.8
3,381,636	+		LRK53_RS15470	0.79	-0.9
3,381,636	+		LRK53_RS15470	0.79	-0.9
3,381,636	+		LRK53_RS15470	0.79	+0.6
3,381,636	+		LRK53_RS15470	0.79	-0.6
3,381,636	+		LRK53_RS15470	0.79	-0.8
3,381,636	+		LRK53_RS15470	0.79	+0.1
3,381,636	+		LRK53_RS15470	0.79	-0.3
3,381,636	+		LRK53_RS15470	0.79	-0.6
3,381,636	+		LRK53_RS15470	0.79	+0.3
3,381,637	-		LRK53_RS15470	0.79	-0.6
3,381,637	-		LRK53_RS15470	0.79	-0.4
3,381,637	-		LRK53_RS15470	0.79	+0.8
3,381,637	-		LRK53_RS15470	0.79	-1.0
3,381,637	-		LRK53_RS15470	0.79	+2.2
3,381,666	+		LRK53_RS15470	0.81	+0.9
3,381,666	+		LRK53_RS15470	0.81	-0.3
3,381,666	+		LRK53_RS15470	0.81	-1.6
3,381,666	+		LRK53_RS15470	0.81	+0.8
3,381,667	-		LRK53_RS15470	0.81	+2.2
3,381,667	-		LRK53_RS15470	0.81	-0.5
3,381,667	-		LRK53_RS15470	0.81	-2.9
3,381,786	+		LRK53_RS15470	0.88	-0.2
3,381,786	+		LRK53_RS15470	0.88	-1.1
3,381,786	+		LRK53_RS15470	0.88	-0.9
3,381,786	+		LRK53_RS15470	0.88	-1.1
3,381,787	-		LRK53_RS15470	0.88	-2.3
3,381,802	-		LRK53_RS15470	0.89	-0.4
3,381,802	-		LRK53_RS15470	0.89	-0.4
3,381,873	+				+0.4
3,381,873	+				+0.3
3,381,873	+				-0.8
3,381,874	-				-0.7
3,381,874	-				-0.8
3,381,874	-				+0.1
3,381,874	-				-2.6
3,381,874	-				-0.3
3,381,874	-				-1.5
3,381,975	+				-2.9
3,381,975	+				-0.7
3,381,975	+				-0.9
3,381,975	+				-1.6
3,381,975	+				-0.3
3,381,975	+				-0.2
3,381,976	-				+0.7
3,381,976	-				-0.9
3,382,154	+				+4.0
3,382,155	-				-0.2
3,382,155	-				-1.8
3,382,265	+		LRK53_RS15475	0.13	-0.3
3,382,265	+		LRK53_RS15475	0.13	-1.0
3,382,265	+		LRK53_RS15475	0.13	-1.4
3,382,265	+		LRK53_RS15475	0.13	-0.7
3,382,266	-		LRK53_RS15475	0.13	-0.6
3,382,266	-		LRK53_RS15475	0.13	+0.2
3,382,569	-		LRK53_RS15475	0.44	-1.7
3,382,667	+		LRK53_RS15475	0.54	-1.4
3,382,667	+		LRK53_RS15475	0.54	+0.1
3,382,667	+		LRK53_RS15475	0.54	-1.4
3,382,667	+		LRK53_RS15475	0.54	-0.4
3,382,667	+		LRK53_RS15475	0.54	-1.2
3,382,668	-		LRK53_RS15475	0.54	-1.8
3,382,668	-		LRK53_RS15475	0.54	-2.3
3,382,668	-		LRK53_RS15475	0.54	-0.4
3,382,668	-		LRK53_RS15475	0.54	-0.2
3,382,668	-		LRK53_RS15475	0.54	-0.4
3,382,700	+		LRK53_RS15475	0.57	-1.2
3,382,700	+		LRK53_RS15475	0.57	-1.4
3,382,701	-		LRK53_RS15475	0.57	-0.4
3,382,701	-		LRK53_RS15475	0.57	-0.9
3,382,701	-		LRK53_RS15475	0.57	-0.5
3,382,701	-		LRK53_RS15475	0.57	-0.8
3,382,910	+		LRK53_RS15475	0.79	-0.4
3,382,910	+		LRK53_RS15475	0.79	+1.4
3,382,911	-		LRK53_RS15475	0.79	-0.0
3,382,911	-		LRK53_RS15475	0.79	-1.8
3,382,961	+		LRK53_RS15475	0.84	-1.7
3,382,961	+		LRK53_RS15475	0.84	-1.0
3,382,961	+		LRK53_RS15475	0.84	-1.1
3,382,961	+		LRK53_RS15475	0.84	+0.7
3,382,961	+		LRK53_RS15475	0.84	+0.1
3,382,962	-		LRK53_RS15475	0.84	+0.2
3,382,962	-		LRK53_RS15475	0.84	+0.4
3,382,962	-		LRK53_RS15475	0.84	-0.2
3,382,962	-		LRK53_RS15475	0.84	-1.0
3,382,962	-		LRK53_RS15475	0.84	-1.5