Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15345

Experiment: Biofilm; Day2; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; pH7
3,349,580	+				-0.7
3,349,580	+				-0.2
3,349,580	+				+0.6
3,349,581	-				-2.2
3,349,581	-				-1.4
3,349,581	-				-2.0
3,349,581	-				-0.4
3,349,581	-				-1.0
3,349,581	-				-0.5
3,349,581	-				+0.3
3,349,611	-				-0.0
3,349,622	+		LRK53_RS15340	0.11	-0.0
3,349,622	+		LRK53_RS15340	0.11	-0.9
3,349,622	+		LRK53_RS15340	0.11	+0.1
3,349,623	-		LRK53_RS15340	0.11	-1.2
3,349,623	-		LRK53_RS15340	0.11	-1.3
3,349,623	-		LRK53_RS15340	0.11	+1.9
3,349,623	-		LRK53_RS15340	0.11	-1.8
3,349,623	-		LRK53_RS15340	0.11	-0.5
3,349,638	-		LRK53_RS15340	0.13	-0.8
3,349,638	-		LRK53_RS15340	0.13	-1.0
3,349,638	-		LRK53_RS15340	0.13	-1.2
3,349,638	-		LRK53_RS15340	0.13	+1.3
3,349,638	-		LRK53_RS15340	0.13	+1.6
3,349,676	+		LRK53_RS15340	0.16	+0.3
3,349,676	+		LRK53_RS15340	0.16	+1.0
3,349,676	+		LRK53_RS15340	0.16	+1.8
3,349,676	+		LRK53_RS15340	0.16	-1.2
3,349,683	-		LRK53_RS15340	0.17	-2.8
3,349,790	+		LRK53_RS15340	0.28	-0.9
3,349,790	+		LRK53_RS15340	0.28	-1.5
3,349,790	+		LRK53_RS15340	0.28	+0.8
3,349,790	+		LRK53_RS15340	0.28	-0.9
3,349,791	-		LRK53_RS15340	0.28	-0.4
3,349,791	-		LRK53_RS15340	0.28	-1.0
3,349,791	-		LRK53_RS15340	0.28	-0.2
3,349,791	-		LRK53_RS15340	0.28	-0.7
3,349,791	-		LRK53_RS15340	0.28	-1.7
3,349,791	-		LRK53_RS15340	0.28	+0.2
3,349,791	-		LRK53_RS15340	0.28	-0.3
3,349,791	-		LRK53_RS15340	0.28	+0.1
3,349,791	-		LRK53_RS15340	0.28	-1.0
3,349,791	-		LRK53_RS15340	0.28	-2.4
3,349,791	-		LRK53_RS15340	0.28	-0.4
3,349,791	-		LRK53_RS15340	0.28	+0.1
3,349,791	-		LRK53_RS15340	0.28	-1.3
3,349,791	-		LRK53_RS15340	0.28	-0.0
3,349,791	-		LRK53_RS15340	0.28	-0.4
3,349,791	-		LRK53_RS15340	0.28	+1.2
3,349,791	-		LRK53_RS15340	0.28	-0.8
3,349,791	-		LRK53_RS15340	0.28	+0.7
3,349,791	-		LRK53_RS15340	0.28	-0.5
3,349,791	-		LRK53_RS15340	0.28	+0.4
3,349,835	+		LRK53_RS15340	0.33	-1.0
3,349,835	+		LRK53_RS15340	0.33	-0.4
3,349,835	+		LRK53_RS15340	0.33	-0.4
3,349,836	-		LRK53_RS15340	0.33	-1.0
3,349,836	-		LRK53_RS15340	0.33	-0.0
3,349,836	-		LRK53_RS15340	0.33	-0.8
3,349,836	-		LRK53_RS15340	0.33	-0.6
3,349,850	+		LRK53_RS15340	0.34	+0.3
3,349,850	+		LRK53_RS15340	0.34	+1.0
3,349,850	+		LRK53_RS15340	0.34	-1.7
3,349,850	+		LRK53_RS15340	0.34	-0.3
3,349,850	+		LRK53_RS15340	0.34	-1.2
3,349,850	+		LRK53_RS15340	0.34	+0.6
3,349,850	+		LRK53_RS15340	0.34	-0.4
3,349,850	+		LRK53_RS15340	0.34	-1.2
3,349,850	+		LRK53_RS15340	0.34	-0.5
3,349,850	+		LRK53_RS15340	0.34	-0.7
3,349,850	+		LRK53_RS15340	0.34	+2.4
3,349,850	+		LRK53_RS15340	0.34	-0.4
3,349,850	+		LRK53_RS15340	0.34	-0.7
3,349,850	+		LRK53_RS15340	0.34	-0.4
3,349,851	-		LRK53_RS15340	0.34	-0.1
3,349,851	-		LRK53_RS15340	0.34	-0.3
3,349,851	-		LRK53_RS15340	0.34	-0.9
3,349,851	-		LRK53_RS15340	0.34	+0.0
3,349,851	-		LRK53_RS15340	0.34	+0.1
3,349,851	-		LRK53_RS15340	0.34	-1.2
3,349,851	-		LRK53_RS15340	0.34	-0.5
3,349,851	-		LRK53_RS15340	0.34	-0.9
3,349,851	-		LRK53_RS15340	0.34	-0.4
3,349,851	-		LRK53_RS15340	0.34	-0.0
3,349,851	-		LRK53_RS15340	0.34	-0.7
3,349,851	-		LRK53_RS15340	0.34	-1.1
3,349,985	+		LRK53_RS15340	0.48	+0.1
3,349,985	+		LRK53_RS15340	0.48	-1.2
3,349,985	+		LRK53_RS15340	0.48	-1.7
3,349,985	+		LRK53_RS15340	0.48	-0.8
3,349,985	+		LRK53_RS15340	0.48	+0.4
3,349,985	+		LRK53_RS15340	0.48	-0.1
3,349,985	+		LRK53_RS15340	0.48	-2.5
3,349,985	+		LRK53_RS15340	0.48	+0.1
3,349,985	+		LRK53_RS15340	0.48	-0.7
3,349,985	+		LRK53_RS15340	0.48	-1.8
3,349,986	-		LRK53_RS15340	0.48	-0.4
3,349,986	-		LRK53_RS15340	0.48	+0.5
3,349,986	-		LRK53_RS15340	0.48	+0.1
3,349,986	-		LRK53_RS15340	0.48	-0.9
3,349,986	-		LRK53_RS15340	0.48	-0.5
3,349,986	-		LRK53_RS15340	0.48	-0.0
3,349,986	-		LRK53_RS15340	0.48	-1.2
3,349,986	-		LRK53_RS15340	0.48	-0.2
3,349,986	-		LRK53_RS15340	0.48	+0.8
3,349,986	-		LRK53_RS15340	0.48	-1.5
3,349,986	-		LRK53_RS15340	0.48	+0.0
3,350,000	+		LRK53_RS15340	0.50	-0.7
3,350,000	+		LRK53_RS15340	0.50	+0.4
3,350,000	+		LRK53_RS15340	0.50	-1.6
3,350,000	+		LRK53_RS15340	0.50	+0.3
3,350,000	+		LRK53_RS15340	0.50	-1.0
3,350,198	+		LRK53_RS15340	0.70	-1.9
3,350,198	+		LRK53_RS15340	0.70	-0.7
3,350,198	+		LRK53_RS15340	0.70	-1.7
3,350,198	+		LRK53_RS15340	0.70	-1.9
3,350,199	-		LRK53_RS15340	0.70	+0.5
3,350,270	+		LRK53_RS15340	0.78	-1.5
3,350,270	+		LRK53_RS15340	0.78	+1.8
3,350,270	+		LRK53_RS15340	0.78	-0.9
3,350,270	+		LRK53_RS15340	0.78	+0.8
3,350,271	-		LRK53_RS15340	0.78	-0.7
3,350,271	-		LRK53_RS15340	0.78	+0.9
3,350,271	-		LRK53_RS15340	0.78	-0.3
3,350,271	-		LRK53_RS15340	0.78	-0.7
3,350,271	-		LRK53_RS15340	0.78	+0.6
3,350,461	+				-0.2
3,350,461	+				-1.9
3,350,462	-				-1.5
3,350,462	-				-0.0
3,350,519	+				-2.1
3,350,519	+				+0.2
3,350,520	-				-1.2
3,350,520	-				+1.0
3,350,520	-				+0.1
3,350,754	-		LRK53_RS15345	0.18	-1.0
3,350,774	+		LRK53_RS15345	0.19	-0.2
3,350,774	+		LRK53_RS15345	0.19	-1.2
3,350,784	+		LRK53_RS15345	0.20	-1.0
3,350,793	+		LRK53_RS15345	0.20	-0.9
3,350,793	+		LRK53_RS15345	0.20	+0.1
3,350,795	+		LRK53_RS15345	0.21	+0.6
3,350,796	-		LRK53_RS15345	0.21	-1.0
3,350,834	+		LRK53_RS15345	0.23	-0.6
3,350,834	+		LRK53_RS15345	0.23	-0.7
3,350,834	+		LRK53_RS15345	0.23	+0.5
3,351,197	+		LRK53_RS15345	0.48	-0.6
3,351,197	+		LRK53_RS15345	0.48	+0.3
3,351,197	+		LRK53_RS15345	0.48	-0.2
3,351,197	+		LRK53_RS15345	0.48	-0.4
3,351,198	-		LRK53_RS15345	0.48	+2.0
3,351,198	-		LRK53_RS15345	0.48	-1.2
3,351,198	-		LRK53_RS15345	0.48	+0.8
3,351,198	-		LRK53_RS15345	0.48	-2.9
3,351,198	-		LRK53_RS15345	0.48	-1.4
3,351,198	-		LRK53_RS15345	0.48	-1.0
3,351,198	-		LRK53_RS15345	0.48	+0.3
3,351,198	-		LRK53_RS15345	0.48	+1.2
3,351,198	-		LRK53_RS15345	0.48	+0.6
3,351,215	+		LRK53_RS15345	0.49	+0.3
3,351,377	+		LRK53_RS15345	0.60	-1.8
3,351,378	-		LRK53_RS15345	0.60	+0.5
3,351,408	+		LRK53_RS15345	0.62	+1.2
3,351,452	+		LRK53_RS15345	0.65	-0.2
3,351,452	+		LRK53_RS15345	0.65	-2.1
3,351,452	+		LRK53_RS15345	0.65	-0.4
3,351,452	+		LRK53_RS15345	0.65	-0.9
3,351,452	+		LRK53_RS15345	0.65	-0.2
3,351,452	+		LRK53_RS15345	0.65	-0.3
3,351,453	-		LRK53_RS15345	0.65	-0.9
3,351,453	-		LRK53_RS15345	0.65	+0.6
3,351,453	-		LRK53_RS15345	0.65	+0.8
3,351,453	-		LRK53_RS15345	0.65	+0.3
3,351,453	-		LRK53_RS15345	0.65	-0.9
3,351,453	-		LRK53_RS15345	0.65	+0.6
3,351,453	-		LRK53_RS15345	0.65	-1.2
3,351,453	-		LRK53_RS15345	0.65	-1.1
3,351,453	-		LRK53_RS15345	0.65	-0.5
3,351,453	-		LRK53_RS15345	0.65	-0.9
3,351,453	-		LRK53_RS15345	0.65	+2.3
3,351,468	-		LRK53_RS15345	0.66	+1.1
3,351,468	-		LRK53_RS15345	0.66	+1.0
3,351,468	-		LRK53_RS15345	0.66	+0.8
3,351,487	-		LRK53_RS15345	0.67	-0.6
3,351,492	+		LRK53_RS15345	0.68	-1.4
3,351,493	-		LRK53_RS15345	0.68	+0.3
3,351,493	-		LRK53_RS15345	0.68	-0.2
3,351,493	-		LRK53_RS15345	0.68	-1.1
3,351,641	+		LRK53_RS15345	0.78	+0.3
3,351,641	+		LRK53_RS15345	0.78	-0.8
3,351,642	-		LRK53_RS15345	0.78	+2.4
3,351,792	+		LRK53_RS15345	0.88	-1.4
3,351,793	-		LRK53_RS15345	0.88	-0.5
3,351,793	-		LRK53_RS15345	0.88	+1.2
3,351,793	-		LRK53_RS15345	0.88	+0.5
3,351,793	-		LRK53_RS15345	0.88	-0.3
3,351,793	-		LRK53_RS15345	0.88	-1.5
3,351,862	+				-0.6
3,351,862	+				-0.9
3,351,863	-				-2.2
3,351,863	-				-0.4
3,351,863	-				-0.5
3,351,886	-				-1.2
3,351,937	+				-1.9
3,351,937	+				-0.5
3,351,937	+				-1.1
3,351,938	-				-2.2
3,351,938	-				-1.9
3,351,978	-				-0.2
3,351,986	+				+3.1
3,351,987	-				-0.9
3,351,987	-				-1.5
3,352,058	+				-0.7
3,352,059	-				-0.6
3,352,100	+				-1.3
3,352,101	-				-0.8
3,352,101	-				-0.4
3,352,101	-				+0.6
3,352,198	-				+1.0
3,352,281	+				-0.9
3,352,282	-				-0.2
3,352,341	-				-0.4
3,352,342	+				+0.3
3,352,342	+				+0.1
3,352,342	+				-1.1
3,352,342	+				-1.0
3,352,343	-				-1.4
3,352,343	-				+1.3
3,352,343	-				+0.7
3,352,413	+		LRK53_RS15350	0.14	-2.1
3,352,414	-		LRK53_RS15350	0.15	+0.3
3,352,435	-		LRK53_RS15350	0.18	-1.0
3,352,538	+		LRK53_RS15350	0.34	+0.3
3,352,538	+		LRK53_RS15350	0.34	-0.9
3,352,538	+		LRK53_RS15350	0.34	-1.6
3,352,538	+		LRK53_RS15350	0.34	-0.4
3,352,538	+		LRK53_RS15350	0.34	+0.2
3,352,539	-		LRK53_RS15350	0.34	+0.4
3,352,599	+		LRK53_RS15350	0.43	+0.2
3,352,599	+		LRK53_RS15350	0.43	-0.0
3,352,600	-		LRK53_RS15350	0.43	-1.2
3,352,600	-		LRK53_RS15350	0.43	-2.0
3,352,687	+		LRK53_RS15350	0.57	-1.8
3,352,753	+		LRK53_RS15350	0.67	-0.9
3,352,753	+		LRK53_RS15350	0.67	-1.0
3,352,753	+		LRK53_RS15350	0.67	+0.8
3,352,753	+		LRK53_RS15350	0.67	-0.5
3,352,754	-		LRK53_RS15350	0.67	+1.3
3,352,754	-		LRK53_RS15350	0.67	-1.0
3,352,889	+		LRK53_RS15350	0.88	-1.7
3,352,890	-		LRK53_RS15350	0.88	-0.2
3,352,912	+				-0.9
3,352,939	+				+1.0
3,352,939	+				-1.8
3,352,939	+				-1.3
3,352,939	+				-0.6
3,352,939	+				-2.1
3,352,939	+				-0.6
3,352,939	+				-0.9
3,352,940	-				+0.1
3,352,940	-				-0.1
3,352,940	-				-1.1
3,352,940	-				-0.1
3,352,940	-				-1.2
3,352,940	-				-0.2
3,352,940	-				+1.1
3,352,940	-				+1.6
3,352,940	-				+1.1