Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15290

Experiment: Biofilm; Day2; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; pH7
3,333,414	+		LRK53_RS15285	0.22	-0.3
3,333,414	+		LRK53_RS15285	0.22	-1.4
3,333,414	+		LRK53_RS15285	0.22	-1.7
3,333,414	+		LRK53_RS15285	0.22	-0.8
3,333,414	+		LRK53_RS15285	0.22	+2.6
3,333,414	+		LRK53_RS15285	0.22	-1.4
3,333,414	+		LRK53_RS15285	0.22	-2.8
3,333,414	+		LRK53_RS15285	0.22	-0.4
3,333,414	+		LRK53_RS15285	0.22	-0.7
3,333,414	+		LRK53_RS15285	0.22	+0.3
3,333,414	+		LRK53_RS15285	0.22	-0.4
3,333,414	+		LRK53_RS15285	0.22	+1.6
3,333,414	+		LRK53_RS15285	0.22	+0.4
3,333,414	+		LRK53_RS15285	0.22	-0.6
3,333,415	-		LRK53_RS15285	0.23	-1.0
3,333,415	-		LRK53_RS15285	0.23	-3.1
3,333,415	-		LRK53_RS15285	0.23	-1.5
3,333,415	-		LRK53_RS15285	0.23	+0.9
3,333,415	-		LRK53_RS15285	0.23	+0.8
3,333,454	+		LRK53_RS15285	0.27	-1.1
3,333,472	+		LRK53_RS15285	0.29	-2.4
3,333,472	+		LRK53_RS15285	0.29	-0.3
3,333,472	+		LRK53_RS15285	0.29	-0.4
3,333,473	-		LRK53_RS15285	0.30	+1.9
3,333,473	-		LRK53_RS15285	0.30	+0.7
3,333,473	-		LRK53_RS15285	0.30	-0.5
3,333,473	-		LRK53_RS15285	0.30	+2.6
3,333,473	-		LRK53_RS15285	0.30	-1.1
3,333,525	-		LRK53_RS15285	0.36	-1.8
3,333,525	-		LRK53_RS15285	0.36	-2.7
3,333,667	+		LRK53_RS15285	0.53	-0.4
3,333,895	+		LRK53_RS15285	0.81	-0.1
3,333,895	+		LRK53_RS15285	0.81	-0.4
3,333,895	+		LRK53_RS15285	0.81	+1.6
3,333,896	-		LRK53_RS15285	0.81	+0.3
3,333,896	-		LRK53_RS15285	0.81	+0.3
3,333,896	-		LRK53_RS15285	0.81	+0.9
3,334,023	+				-0.9
3,334,023	+				+1.1
3,334,023	+				-1.1
3,334,023	+				-1.3
3,334,023	+				-1.6
3,334,023	+				-1.0
3,334,023	+				-1.1
3,334,023	+				-0.0
3,334,023	+				-0.4
3,334,023	+				-1.9
3,334,023	+				-0.2
3,334,023	+				-0.2
3,334,023	+				-0.9
3,334,023	+				+0.4
3,334,023	+				-2.0
3,334,023	+				-1.3
3,334,023	+				-1.4
3,334,023	+				-0.4
3,334,023	+				-0.3
3,334,023	+				-1.3
3,334,023	+				-0.1
3,334,023	+				-1.0
3,334,024	-				-0.7
3,334,024	-				+0.4
3,334,024	-				-1.0
3,334,024	-				-0.5
3,334,024	-				-1.2
3,334,024	-				-0.8
3,334,024	-				+0.1
3,334,024	-				-1.3
3,334,024	-				+1.1
3,334,024	-				+0.4
3,334,024	-				-2.4
3,334,024	-				-2.3
3,334,024	-				-1.0
3,334,024	-				-0.4
3,334,024	-				-0.0
3,334,026	+				+0.3
3,334,026	+				-0.4
3,334,026	+				-1.0
3,334,026	+				+0.9
3,334,027	-				+0.1
3,334,027	-				+1.3
3,334,027	-				+0.6
3,334,027	-				-2.2
3,334,062	+				-1.2
3,334,062	+				-0.6
3,334,062	+				+0.1
3,334,062	+				+0.8
3,334,062	+				+0.6
3,334,062	+				-0.9
3,334,062	+				-0.8
3,334,062	+				-1.5
3,334,062	+				+1.6
3,334,062	+				+0.5
3,334,063	-				-1.2
3,334,063	-				-0.9
3,334,063	-				+0.6
3,334,135	+				-0.6
3,334,135	+				-1.3
3,334,135	+				-0.3
3,334,135	+				-0.8
3,334,135	+				-2.1
3,334,135	+				-0.4
3,334,135	+				-0.8
3,334,135	+				-1.5
3,334,135	+				-0.1
3,334,135	+				-3.1
3,334,135	+				-0.7
3,334,135	+				-0.9
3,334,135	+				-1.5
3,334,135	+				-0.4
3,334,135	+				-1.4
3,334,135	+				-1.6
3,334,135	+				-0.4
3,334,135	+				-0.4
3,334,135	+				-0.3
3,334,135	+				+0.2
3,334,135	+				-0.7
3,334,135	+				+0.4
3,334,135	+				-0.0
3,334,135	+				-0.8
3,334,135	+				+0.4
3,334,135	+				+0.7
3,334,135	+				+0.1
3,334,135	+				-0.7
3,334,135	+				+0.2
3,334,135	+				-1.1
3,334,135	+				-0.6
3,334,135	+				-1.5
3,334,135	+				+1.0
3,334,135	+				-0.1
3,334,135	+				-0.5
3,334,135	+				-1.8
3,334,135	+				+0.6
3,334,135	+				+0.6
3,334,135	+				+0.6
3,334,135	+				+0.3
3,334,135	+				-0.5
3,334,135	+				+0.1
3,334,135	+				-0.1
3,334,135	+				-1.4
3,334,135	+				-0.3
3,334,135	+				-2.7
3,334,135	+				-0.6
3,334,136	-				-0.0
3,334,136	-				+0.2
3,334,136	-				-0.0
3,334,136	-				+0.2
3,334,136	-				-1.0
3,334,136	-				-1.4
3,334,136	-				+0.1
3,334,136	-				+0.4
3,334,136	-				-0.8
3,334,136	-				-0.3
3,334,136	-				+0.4
3,334,136	-				-0.5
3,334,136	-				-0.7
3,334,136	-				-2.4
3,334,136	-				-0.9
3,334,136	-				-1.4
3,334,136	-				-0.4
3,334,136	-				+0.2
3,334,136	-				-0.4
3,334,136	-				-0.9
3,334,136	-				+0.1
3,334,136	-				-0.9
3,334,136	-				-0.6
3,334,136	-				-1.3
3,334,136	-				-0.6
3,334,136	-				-0.4
3,334,136	-				-2.7
3,334,136	-				-1.4
3,334,136	-				-0.5
3,334,136	-				-1.4
3,334,136	-				-0.6
3,334,136	-				-0.4
3,334,136	-				+0.2
3,334,136	-				-0.0
3,334,136	-				-0.5
3,334,136	-				-0.3
3,334,194	+				-0.0
3,334,194	+				-0.7
3,334,194	+				-1.6
3,334,195	-				-0.9
3,334,195	-				+0.4
3,334,206	+				-0.1
3,334,206	+				+1.1
3,334,206	+				-0.7
3,334,206	+				+0.4
3,334,206	+				-0.4
3,334,206	+				-2.8
3,334,206	+				-0.5
3,334,206	+				-1.3
3,334,206	+				-1.7
3,334,206	+				-1.3
3,334,206	+				-0.5
3,334,206	+				+1.2
3,334,206	+				+2.0
3,334,206	+				-1.4
3,334,207	-				+0.5
3,334,207	-				-1.5
3,334,207	-				-0.3
3,334,207	-				-0.3
3,334,207	-				-1.7
3,334,207	-				-0.8
3,334,207	-				-1.1
3,334,207	-				+0.8
3,334,207	-				-0.8
3,334,207	-				-0.9
3,334,207	-				-1.4
3,334,207	-				-0.4
3,334,207	-				-1.4
3,334,207	-				+0.2
3,334,207	-				-0.1
3,334,207	-				-2.1
3,334,255	+				-0.8
3,334,255	+				+0.5
3,334,256	-				+0.2
3,334,289	+				+0.3
3,334,516	-		LRK53_RS15290	0.34	+0.1
3,334,600	+		LRK53_RS15290	0.43	+0.6
3,334,600	+		LRK53_RS15290	0.43	-0.5
3,334,600	+		LRK53_RS15290	0.43	-1.3
3,334,600	+		LRK53_RS15290	0.43	-1.7
3,334,600	+		LRK53_RS15290	0.43	-0.4
3,334,600	+		LRK53_RS15290	0.43	+0.6
3,334,600	+		LRK53_RS15290	0.43	-0.1
3,334,600	+		LRK53_RS15290	0.43	+1.0
3,334,600	+		LRK53_RS15290	0.43	+0.2
3,334,600	+		LRK53_RS15290	0.43	-0.9
3,334,601	-		LRK53_RS15290	0.44	+0.9
3,334,601	-		LRK53_RS15290	0.44	-0.8
3,334,601	-		LRK53_RS15290	0.44	-0.4
3,334,601	-		LRK53_RS15290	0.44	-1.0
3,334,601	-		LRK53_RS15290	0.44	+1.6
3,334,601	-		LRK53_RS15290	0.44	+0.2
3,334,601	-		LRK53_RS15290	0.44	-0.3
3,334,601	-		LRK53_RS15290	0.44	+1.1
3,334,601	-		LRK53_RS15290	0.44	-0.3
3,334,601	-		LRK53_RS15290	0.44	-0.2
3,334,601	-		LRK53_RS15290	0.44	-0.4
3,334,601	-		LRK53_RS15290	0.44	+1.0
3,334,601	-		LRK53_RS15290	0.44	+0.7
3,334,625	+		LRK53_RS15290	0.46	-1.6
3,334,625	+		LRK53_RS15290	0.46	-0.4
3,334,625	+		LRK53_RS15290	0.46	-0.1
3,334,671	+		LRK53_RS15290	0.51	-0.1
3,334,715	+		LRK53_RS15290	0.56	-0.9
3,334,753	+		LRK53_RS15290	0.61	-1.4
3,334,753	+		LRK53_RS15290	0.61	-0.4
3,334,753	+		LRK53_RS15290	0.61	-1.3
3,334,753	+		LRK53_RS15290	0.61	+0.9
3,334,753	+		LRK53_RS15290	0.61	-1.7
3,334,753	+		LRK53_RS15290	0.61	-0.7
3,334,753	+		LRK53_RS15290	0.61	+0.6
3,334,753	+		LRK53_RS15290	0.61	-0.6
3,334,753	+		LRK53_RS15290	0.61	-0.9
3,334,754	-		LRK53_RS15290	0.61	+0.4
3,334,754	-		LRK53_RS15290	0.61	+1.4
3,334,754	-		LRK53_RS15290	0.61	-0.8
3,334,754	-		LRK53_RS15290	0.61	-0.8
3,334,754	-		LRK53_RS15290	0.61	+0.4
3,334,754	-		LRK53_RS15290	0.61	+0.4
3,334,754	-		LRK53_RS15290	0.61	-0.1
3,334,754	-		LRK53_RS15290	0.61	-0.3
3,334,754	-		LRK53_RS15290	0.61	+1.9
3,334,754	-		LRK53_RS15290	0.61	-0.6
3,334,754	-		LRK53_RS15290	0.61	-0.8
3,334,754	-		LRK53_RS15290	0.61	-0.0
3,334,770	+		LRK53_RS15290	0.63	+0.2
3,334,770	+		LRK53_RS15290	0.63	+0.7
3,334,770	+		LRK53_RS15290	0.63	-0.5
3,334,770	+		LRK53_RS15290	0.63	+1.2
3,334,770	+		LRK53_RS15290	0.63	+1.6
3,334,770	+		LRK53_RS15290	0.63	-1.6
3,334,770	+		LRK53_RS15290	0.63	-0.3
3,334,770	+		LRK53_RS15290	0.63	+0.6
3,334,771	-		LRK53_RS15290	0.63	-0.6
3,334,771	-		LRK53_RS15290	0.63	+1.2
3,334,771	-		LRK53_RS15290	0.63	-1.8
3,334,771	-		LRK53_RS15290	0.63	+0.2
3,334,771	-		LRK53_RS15290	0.63	-2.6
3,334,771	-		LRK53_RS15290	0.63	+0.9
3,334,837	+		LRK53_RS15290	0.70	-0.7
3,334,837	+		LRK53_RS15290	0.70	-0.3
3,334,837	+		LRK53_RS15290	0.70	+0.6
3,334,837	+		LRK53_RS15290	0.70	-1.1
3,334,838	-		LRK53_RS15290	0.70	-2.2
3,334,838	-		LRK53_RS15290	0.70	-3.4
3,334,838	-		LRK53_RS15290	0.70	+0.9
3,334,838	-		LRK53_RS15290	0.70	-0.7
3,334,838	-		LRK53_RS15290	0.70	+0.4
3,334,838	-		LRK53_RS15290	0.70	-0.1
3,334,838	-		LRK53_RS15290	0.70	+0.2
3,334,838	-		LRK53_RS15290	0.70	+1.3
3,335,130	+				+0.1
3,335,130	+				-0.9
3,335,130	+				-1.3
3,335,130	+				+0.6
3,335,131	-				-1.0
3,335,131	-				-2.1
3,335,131	-				+1.6
3,335,131	-				+0.2
3,335,303	+				+0.4
3,335,303	+				-0.7
3,335,303	+				-0.6
3,335,303	+				-2.4
3,335,303	+				-1.0
3,335,303	+				-0.0
3,335,303	+				-1.5
3,335,304	-				-0.5
3,335,304	-				-0.0
3,335,304	-				-1.1
3,335,304	-				+0.4
3,335,466	+		LRK53_RS15295	0.11	+2.0
3,335,466	+		LRK53_RS15295	0.11	-1.6
3,335,466	+		LRK53_RS15295	0.11	-0.2
3,335,466	+		LRK53_RS15295	0.11	+0.0
3,335,466	+		LRK53_RS15295	0.11	+1.0
3,335,467	-		LRK53_RS15295	0.11	-0.7
3,335,467	-		LRK53_RS15295	0.11	-0.0
3,335,467	-		LRK53_RS15295	0.11	+0.6
3,335,467	-		LRK53_RS15295	0.11	-1.2
3,335,536	+		LRK53_RS15295	0.17	+1.5
3,335,583	+		LRK53_RS15295	0.21	+0.4
3,335,584	-		LRK53_RS15295	0.21	-0.3
3,335,584	-		LRK53_RS15295	0.21	-0.9
3,335,953	+		LRK53_RS15295	0.52	-0.4
3,335,954	-		LRK53_RS15295	0.52	-0.4
3,336,025	+		LRK53_RS15295	0.59	-0.3