Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12945

Experiment: Biofilm; Day2; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; pH7
2,863,651	+		LRK53_RS12935	0.67	+0.7
2,863,651	+		LRK53_RS12935	0.67	+0.9
2,863,651	+		LRK53_RS12935	0.67	+0.6
2,863,652	-		LRK53_RS12935	0.67	+0.8
2,863,652	-		LRK53_RS12935	0.67	+1.1
2,863,673	-		LRK53_RS12935	0.68	-2.1
2,863,687	-		LRK53_RS12935	0.69	-0.5
2,863,732	+		LRK53_RS12935	0.71	-0.9
2,863,733	-		LRK53_RS12935	0.71	-0.9
2,863,750	+		LRK53_RS12935	0.72	+0.5
2,863,751	-		LRK53_RS12935	0.72	-1.4
2,863,769	-		LRK53_RS12935	0.73	+0.1
2,863,769	-		LRK53_RS12935	0.73	+1.1
2,863,778	+		LRK53_RS12935	0.74	-1.4
2,863,779	-		LRK53_RS12935	0.74	-1.3
2,863,824	-		LRK53_RS12935	0.76	-1.3
2,863,837	-		LRK53_RS12935	0.77	-1.2
2,863,837	-		LRK53_RS12935	0.77	+0.3
2,863,917	-		LRK53_RS12935	0.82	-0.2
2,863,917	-		LRK53_RS12935	0.82	-0.1
2,863,955	+		LRK53_RS12935	0.84	-0.7
2,863,955	+		LRK53_RS12935	0.84	-1.3
2,863,981	+		LRK53_RS12935	0.85	+0.7
2,863,993	+		LRK53_RS12935	0.86	+0.1
2,863,993	+		LRK53_RS12935	0.86	+0.1
2,863,993	+		LRK53_RS12935	0.86	+0.4
2,863,993	+		LRK53_RS12935	0.86	-1.8
2,863,994	-		LRK53_RS12935	0.86	-0.3
2,863,994	-		LRK53_RS12935	0.86	+0.1
2,863,994	-		LRK53_RS12935	0.86	-0.9
2,863,994	-		LRK53_RS12935	0.86	-0.6
2,864,017	+		LRK53_RS12935	0.87	+0.2
2,864,017	+		LRK53_RS12935	0.87	+0.9
2,864,018	-		LRK53_RS12935	0.87	+0.6
2,864,018	-		LRK53_RS12935	0.87	-1.1
2,864,018	-		LRK53_RS12935	0.87	-0.3
2,864,018	-		LRK53_RS12935	0.87	-0.9
2,864,026	+		LRK53_RS12935	0.88	-0.6
2,864,027	-		LRK53_RS12935	0.88	-0.1
2,864,027	-		LRK53_RS12935	0.88	-1.0
2,864,027	-		LRK53_RS12935	0.88	-0.1
2,864,098	+				-0.3
2,864,098	+				+0.3
2,864,099	-				-1.4
2,864,099	-				+0.9
2,864,117	+				+0.1
2,864,118	-				-0.2
2,864,153	+				-0.3
2,864,180	+				+0.3
2,864,180	+				-1.2
2,864,181	-				+0.6
2,864,181	-				-0.5
2,864,203	-				-1.1
2,864,235	+				-1.1
2,864,255	+				-1.3
2,864,552	+				-0.1
2,864,552	+				-0.7
2,864,552	+				-0.3
2,864,552	+				-0.1
2,864,552	+				-1.6
2,864,552	+				+0.5
2,864,552	+				+0.2
2,864,552	+				-1.2
2,864,552	+				-0.5
2,864,552	+				+0.7
2,864,552	+				+0.8
2,864,552	+				+0.7
2,864,552	+				-1.2
2,864,552	+				+0.3
2,864,552	+				-3.2
2,864,552	+				-1.0
2,864,552	+				-0.4
2,864,552	+				-1.7
2,864,552	+				+1.3
2,864,552	+				+1.0
2,864,552	+				-0.9
2,864,552	+				+0.1
2,864,552	+				-0.9
2,864,552	+				+1.8
2,864,552	+				-1.3
2,864,552	+				-1.2
2,864,552	+				+0.0
2,864,552	+				-0.4
2,864,553	-				-0.7
2,864,553	-				+0.7
2,864,553	-				+0.0
2,864,553	-				-0.0
2,864,553	-				-0.7
2,864,553	-				-0.6
2,864,553	-				-2.2
2,864,553	-				-0.4
2,864,553	-				+0.7
2,864,553	-				-0.5
2,864,553	-				-1.9
2,864,553	-				-0.7
2,864,553	-				-1.5
2,864,553	-				+1.4
2,864,553	-				-0.4
2,864,553	-				-1.3
2,864,553	-				-1.8
2,864,553	-				+1.6
2,864,553	-				+0.7
2,864,553	-				-1.4
2,864,553	-				-0.8
2,864,616	+				+0.4
2,864,617	-				-1.6
2,864,663	+				+0.5
2,864,663	+				-1.2
2,864,663	+				+0.1
2,864,664	-				+0.8
2,864,664	-				-1.8
2,864,704	+		LRK53_RS12945	0.24	+1.5
2,864,704	+		LRK53_RS12945	0.24	-0.5
2,864,704	+		LRK53_RS12945	0.24	-0.7
2,864,704	+		LRK53_RS12945	0.24	-0.2
2,864,704	+		LRK53_RS12945	0.24	-0.8
2,864,704	+		LRK53_RS12945	0.24	-1.4
2,864,704	+		LRK53_RS12945	0.24	+0.4
2,864,705	-		LRK53_RS12945	0.24	+1.6
2,864,705	-		LRK53_RS12945	0.24	+0.1
2,864,705	-		LRK53_RS12945	0.24	-1.2
2,864,705	-		LRK53_RS12945	0.24	-1.7
2,864,719	+		LRK53_RS12945	0.29	-0.8
2,864,719	+		LRK53_RS12945	0.29	-1.1
2,864,719	+		LRK53_RS12945	0.29	+0.5
2,864,719	+		LRK53_RS12945	0.29	-0.8
2,864,719	+		LRK53_RS12945	0.29	+1.1
2,864,719	+		LRK53_RS12945	0.29	-2.0
2,864,719	+		LRK53_RS12945	0.29	-0.3
2,864,719	+		LRK53_RS12945	0.29	-2.0
2,864,719	+		LRK53_RS12945	0.29	-1.2
2,864,720	-		LRK53_RS12945	0.30	+0.7
2,864,720	-		LRK53_RS12945	0.30	-1.8
2,864,720	-		LRK53_RS12945	0.30	+1.6
2,864,720	-		LRK53_RS12945	0.30	-1.8
2,864,720	-		LRK53_RS12945	0.30	+0.2
2,864,720	-		LRK53_RS12945	0.30	+1.9
2,864,720	-		LRK53_RS12945	0.30	-1.1
2,864,720	-		LRK53_RS12945	0.30	+0.9
2,864,720	-		LRK53_RS12945	0.30	+0.8
2,864,731	+		LRK53_RS12945	0.34	-0.6
2,864,731	+		LRK53_RS12945	0.34	-0.1
2,864,731	+		LRK53_RS12945	0.34	-1.5
2,864,731	+		LRK53_RS12945	0.34	-2.2
2,864,731	+		LRK53_RS12945	0.34	-0.2
2,864,731	+		LRK53_RS12945	0.34	-1.0
2,864,731	+		LRK53_RS12945	0.34	-1.9
2,864,731	+		LRK53_RS12945	0.34	-0.1
2,864,731	+		LRK53_RS12945	0.34	-0.7
2,864,731	+		LRK53_RS12945	0.34	-1.2
2,864,731	+		LRK53_RS12945	0.34	-0.5
2,864,731	+		LRK53_RS12945	0.34	-0.9
2,864,731	+		LRK53_RS12945	0.34	-1.2
2,864,731	+		LRK53_RS12945	0.34	-2.4
2,864,731	+		LRK53_RS12945	0.34	-0.8
2,864,731	+		LRK53_RS12945	0.34	-1.3
2,864,731	+		LRK53_RS12945	0.34	-0.4
2,864,731	+		LRK53_RS12945	0.34	+0.5
2,864,731	+		LRK53_RS12945	0.34	-1.6
2,864,731	+		LRK53_RS12945	0.34	-1.8
2,864,731	+		LRK53_RS12945	0.34	+0.9
2,864,732	-		LRK53_RS12945	0.34	+1.0
2,864,732	-		LRK53_RS12945	0.34	-0.9
2,864,732	-		LRK53_RS12945	0.34	+0.7
2,864,732	-		LRK53_RS12945	0.34	-0.4
2,864,732	-		LRK53_RS12945	0.34	-1.7
2,864,732	-		LRK53_RS12945	0.34	-1.3
2,864,732	-		LRK53_RS12945	0.34	+0.7
2,864,732	-		LRK53_RS12945	0.34	-1.4
2,864,732	-		LRK53_RS12945	0.34	-0.3
2,864,732	-		LRK53_RS12945	0.34	-1.1
2,864,732	-		LRK53_RS12945	0.34	+1.8
2,864,732	-		LRK53_RS12945	0.34	-0.6
2,864,732	-		LRK53_RS12945	0.34	+0.4
2,864,732	-		LRK53_RS12945	0.34	+0.1
2,864,732	-		LRK53_RS12945	0.34	-0.8
2,864,732	-		LRK53_RS12945	0.34	-2.0
2,864,732	-		LRK53_RS12945	0.34	-0.7
2,864,814	+		LRK53_RS12945	0.65	+0.4
2,864,815	-		LRK53_RS12945	0.65	-0.8
2,864,815	-		LRK53_RS12945	0.65	+1.7
2,864,852	+		LRK53_RS12945	0.79	-0.6
2,864,853	-		LRK53_RS12945	0.79	-1.4
2,864,853	-		LRK53_RS12945	0.79	+0.7
2,864,853	-		LRK53_RS12945	0.79	-0.8
2,864,853	-		LRK53_RS12945	0.79	-0.6
2,864,898	+				-1.4
2,864,912	+				+1.0
2,864,912	+				-0.6
2,864,912	+				-1.9
2,864,912	+				-0.6
2,864,912	+				-1.1
2,864,913	-				+0.3
2,864,913	-				-0.1
2,864,913	-				-1.3
2,864,913	-				-1.2
2,864,913	-				-0.9
2,864,913	-				+0.9
2,864,923	+				+0.2
2,864,923	+				-1.3
2,865,016	-				-0.9
2,865,016	-				-0.2
2,865,016	-				+0.5
2,865,042	+				-1.6
2,865,042	+				-0.1
2,865,042	+				-0.6
2,865,042	+				-0.6
2,865,042	+				-0.4
2,865,042	+				-1.2
2,865,042	+				+0.2
2,865,042	+				-2.4
2,865,042	+				-0.0
2,865,042	+				+0.6
2,865,042	+				-1.6
2,865,043	-				+0.2
2,865,043	-				+0.4
2,865,043	-				-2.8
2,865,043	-				-0.8
2,865,043	-				-0.6
2,865,043	-				+0.2
2,865,169	+		LRK53_RS12950	0.15	-0.5
2,865,169	+		LRK53_RS12950	0.15	-1.6
2,865,169	+		LRK53_RS12950	0.15	-0.6
2,865,169	+		LRK53_RS12950	0.15	-0.4
2,865,169	+		LRK53_RS12950	0.15	-2.0
2,865,169	+		LRK53_RS12950	0.15	-1.7
2,865,170	-		LRK53_RS12950	0.15	-0.2
2,865,245	+		LRK53_RS12950	0.24	-1.5
2,865,245	+		LRK53_RS12950	0.24	-0.4
2,865,245	+		LRK53_RS12950	0.24	-0.6
2,865,245	+		LRK53_RS12950	0.24	+0.1
2,865,245	+		LRK53_RS12950	0.24	+0.4
2,865,245	+		LRK53_RS12950	0.24	+0.3
2,865,245	+		LRK53_RS12950	0.24	-2.0
2,865,246	-		LRK53_RS12950	0.24	-0.4
2,865,246	-		LRK53_RS12950	0.24	-1.2
2,865,246	-		LRK53_RS12950	0.24	+0.6
2,865,246	-		LRK53_RS12950	0.24	+1.3
2,865,309	-		LRK53_RS12950	0.32	-0.7
2,865,309	-		LRK53_RS12950	0.32	-0.8
2,865,378	-		LRK53_RS12950	0.40	+0.1
2,865,404	+		LRK53_RS12950	0.43	-1.1
2,865,404	+		LRK53_RS12950	0.43	-0.6
2,865,404	+		LRK53_RS12950	0.43	-1.6
2,865,404	+		LRK53_RS12950	0.43	-1.3
2,865,473	+		LRK53_RS12950	0.52	-2.6
2,865,473	+		LRK53_RS12950	0.52	+0.3
2,865,473	+		LRK53_RS12950	0.52	-0.1
2,865,473	+		LRK53_RS12950	0.52	-0.1
2,865,473	+		LRK53_RS12950	0.52	-0.6
2,865,473	+		LRK53_RS12950	0.52	+0.2
2,865,474	-		LRK53_RS12950	0.52	+0.8
2,865,474	-		LRK53_RS12950	0.52	-0.6
2,865,474	-		LRK53_RS12950	0.52	-0.9
2,865,474	-		LRK53_RS12950	0.52	+0.9
2,865,584	+		LRK53_RS12950	0.65	-0.3
2,865,584	+		LRK53_RS12950	0.65	-0.2
2,865,584	+		LRK53_RS12950	0.65	-0.8
2,865,584	+		LRK53_RS12950	0.65	+1.7
2,865,584	+		LRK53_RS12950	0.65	-0.1
2,865,585	-		LRK53_RS12950	0.65	-1.5
2,865,585	-		LRK53_RS12950	0.65	-0.8
2,865,585	-		LRK53_RS12950	0.65	+0.2
2,865,585	-		LRK53_RS12950	0.65	-1.4
2,865,585	-		LRK53_RS12950	0.65	+1.0
2,865,585	-		LRK53_RS12950	0.65	-1.9
2,865,650	+		LRK53_RS12950	0.73	+1.4
2,865,651	-		LRK53_RS12950	0.73	-0.2
2,865,681	-		LRK53_RS12950	0.77	-0.2
2,865,681	-		LRK53_RS12950	0.77	+0.9
2,865,683	+		LRK53_RS12950	0.77	-0.5
2,865,683	+		LRK53_RS12950	0.77	-0.9
2,865,683	+		LRK53_RS12950	0.77	-0.3
2,865,683	+		LRK53_RS12950	0.77	-1.3
2,865,684	-		LRK53_RS12950	0.77	-0.6
2,865,684	-		LRK53_RS12950	0.77	+0.7
2,865,684	-		LRK53_RS12950	0.77	-3.4
2,865,684	-		LRK53_RS12950	0.77	-0.8
2,865,684	-		LRK53_RS12950	0.77	-0.8
2,865,684	-		LRK53_RS12950	0.77	-0.4
2,865,906	+				-1.3
2,865,906	+				-1.5
2,865,906	+				+0.1
2,865,907	-				-2.1