Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08650

Experiment: Biofilm; Day2; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; pH7
1,941,808	+				-0.3
1,941,808	+				+0.4
1,941,808	+				+0.3
1,941,811	+				-0.8
1,941,811	+				-0.5
1,941,811	+				+1.1
1,941,811	+				-1.1
1,941,811	+				+1.1
1,941,811	+				+0.9
1,941,811	+				-0.9
1,941,811	+				-2.5
1,941,811	+				-0.8
1,941,812	-				-0.5
1,941,812	-				+0.4
1,941,812	-				+0.6
1,941,812	-				+1.2
1,941,812	-				-1.0
1,941,817	+				+0.5
1,941,817	+				-2.2
1,942,003	+				-0.6
1,942,003	+				-0.3
1,942,003	+				+0.5
1,942,003	+				-0.9
1,942,003	+				-1.1
1,942,003	+				+0.3
1,942,003	+				-1.6
1,942,003	+				-0.5
1,942,004	-				-1.0
1,942,004	-				+1.1
1,942,006	+				+0.0
1,942,006	+				+0.4
1,942,006	+				-0.5
1,942,006	+				-0.5
1,942,006	+				-1.2
1,942,007	-				+0.2
1,942,007	-				+0.0
1,942,007	-				+1.0
1,942,007	-				+0.3
1,942,007	-				-0.2
1,942,007	-				+0.4
1,942,007	-				-1.9
1,942,032	-				+0.5
1,942,047	+				+1.5
1,942,047	+				-0.0
1,942,048	-				-1.3
1,942,069	+		LRK53_RS08645	0.11	-0.2
1,942,120	+		LRK53_RS08645	0.18	+0.2
1,942,120	+		LRK53_RS08645	0.18	-1.0
1,942,120	+		LRK53_RS08645	0.18	+0.1
1,942,121	-		LRK53_RS08645	0.18	-0.7
1,942,134	+		LRK53_RS08645	0.20	-1.2
1,942,134	+		LRK53_RS08645	0.20	+0.5
1,942,135	-		LRK53_RS08645	0.21	+2.1
1,942,135	-		LRK53_RS08645	0.21	-0.2
1,942,135	-		LRK53_RS08645	0.21	-1.9
1,942,135	-		LRK53_RS08645	0.21	+2.1
1,942,167	+		LRK53_RS08645	0.25	-1.4
1,942,167	+		LRK53_RS08645	0.25	-1.1
1,942,168	-		LRK53_RS08645	0.25	+0.4
1,942,168	-		LRK53_RS08645	0.25	-0.2
1,942,267	+		LRK53_RS08645	0.40	-1.6
1,942,268	-		LRK53_RS08645	0.41	-0.2
1,942,268	-		LRK53_RS08645	0.41	-0.6
1,942,286	-		LRK53_RS08645	0.43	-0.9
1,942,286	-		LRK53_RS08645	0.43	+0.0
1,942,328	-		LRK53_RS08645	0.50	-0.1
1,942,447	-		LRK53_RS08645	0.68	-0.3
1,942,489	+		LRK53_RS08645	0.74	-0.0
1,942,490	-		LRK53_RS08645	0.74	+0.4
1,942,490	-		LRK53_RS08645	0.74	-1.8
1,942,522	+		LRK53_RS08645	0.79	+0.2
1,942,522	+		LRK53_RS08645	0.79	+0.1
1,942,522	+		LRK53_RS08645	0.79	-0.2
1,942,523	-		LRK53_RS08645	0.79	+0.8
1,942,523	-		LRK53_RS08645	0.79	+0.5
1,942,523	-		LRK53_RS08645	0.79	-1.5
1,942,523	-		LRK53_RS08645	0.79	-0.1
1,942,523	-		LRK53_RS08645	0.79	+0.8
1,942,523	-		LRK53_RS08645	0.79	+0.2
1,942,523	-		LRK53_RS08645	0.79	-0.9
1,942,591	+		LRK53_RS08645	0.89	-0.7
1,942,591	+		LRK53_RS08645	0.89	-2.5
1,942,591	+		LRK53_RS08645	0.89	-0.7
1,942,592	-		LRK53_RS08645	0.89	-1.1
1,942,592	-		LRK53_RS08645	0.89	-1.1
1,942,645	+				-2.8
1,942,645	+				+1.0
1,942,645	+				-1.2
1,942,645	+				-1.9
1,942,646	-				-1.0
1,942,646	-				-2.8
1,942,646	-				-0.3
1,942,672	-				-0.5
1,942,730	+				-0.6
1,942,730	+				-1.3
1,942,730	+				-2.5
1,942,730	+				+0.0
1,942,730	+				-0.8
1,942,730	+				-1.8
1,942,731	-				-0.2
1,942,731	-				-2.8
1,942,731	-				-0.4
1,942,827	+				-0.7
1,942,827	+				+1.0
1,942,827	+				-0.5
1,942,827	+				+0.5
1,942,827	+				+1.0
1,942,827	+				+0.2
1,942,827	+				-0.2
1,942,827	+				-1.3
1,942,827	+				+0.0
1,942,828	-				-2.2
1,942,828	-				-1.8
1,943,025	+		LRK53_RS08650	0.19	-0.6
1,943,025	+		LRK53_RS08650	0.19	-1.6
1,943,096	+		LRK53_RS08650	0.24	-0.5
1,943,096	+		LRK53_RS08650	0.24	+0.1
1,943,096	+		LRK53_RS08650	0.24	-1.0
1,943,096	+		LRK53_RS08650	0.24	+0.5
1,943,096	+		LRK53_RS08650	0.24	+0.5
1,943,096	+		LRK53_RS08650	0.24	-0.5
1,943,096	+		LRK53_RS08650	0.24	-0.5
1,943,096	+		LRK53_RS08650	0.24	+1.4
1,943,096	+		LRK53_RS08650	0.24	+0.7
1,943,096	+		LRK53_RS08650	0.24	-0.2
1,943,096	+		LRK53_RS08650	0.24	-0.0
1,943,097	-		LRK53_RS08650	0.24	+0.0
1,943,097	-		LRK53_RS08650	0.24	+0.0
1,943,097	-		LRK53_RS08650	0.24	+0.1
1,943,097	-		LRK53_RS08650	0.24	-0.5
1,943,097	-		LRK53_RS08650	0.24	-1.5
1,943,097	-		LRK53_RS08650	0.24	-0.6
1,943,097	-		LRK53_RS08650	0.24	+0.0
1,943,097	-		LRK53_RS08650	0.24	-0.8
1,943,097	-		LRK53_RS08650	0.24	+0.2
1,943,097	-		LRK53_RS08650	0.24	-0.3
1,943,097	-		LRK53_RS08650	0.24	-0.4
1,943,097	-		LRK53_RS08650	0.24	-0.2
1,943,097	-		LRK53_RS08650	0.24	+1.8
1,943,114	+		LRK53_RS08650	0.25	-1.6
1,943,114	+		LRK53_RS08650	0.25	-0.5
1,943,114	+		LRK53_RS08650	0.25	+1.2
1,943,114	+		LRK53_RS08650	0.25	+0.9
1,943,114	+		LRK53_RS08650	0.25	-0.1
1,943,114	+		LRK53_RS08650	0.25	-0.8
1,943,114	+		LRK53_RS08650	0.25	-0.1
1,943,114	+		LRK53_RS08650	0.25	-0.0
1,943,115	-		LRK53_RS08650	0.25	-1.7
1,943,115	-		LRK53_RS08650	0.25	-1.1
1,943,115	-		LRK53_RS08650	0.25	-0.1
1,943,115	-		LRK53_RS08650	0.25	+0.3
1,943,115	-		LRK53_RS08650	0.25	+0.4
1,943,115	-		LRK53_RS08650	0.25	+0.5
1,943,115	-		LRK53_RS08650	0.25	-0.6
1,943,117	+		LRK53_RS08650	0.25	+0.4
1,943,117	+		LRK53_RS08650	0.25	+1.7
1,943,117	+		LRK53_RS08650	0.25	-1.0
1,943,117	+		LRK53_RS08650	0.25	-0.5
1,943,117	+		LRK53_RS08650	0.25	+0.5
1,943,117	+		LRK53_RS08650	0.25	-0.3
1,943,117	+		LRK53_RS08650	0.25	-0.2
1,943,117	+		LRK53_RS08650	0.25	+1.7
1,943,118	-		LRK53_RS08650	0.26	-0.2
1,943,118	-		LRK53_RS08650	0.26	+1.7
1,943,231	+		LRK53_RS08650	0.33	+1.1
1,943,231	+		LRK53_RS08650	0.33	+0.7
1,943,232	-		LRK53_RS08650	0.33	-1.0
1,943,330	+		LRK53_RS08650	0.40	+0.7
1,943,378	+		LRK53_RS08650	0.44	+1.5
1,943,378	+		LRK53_RS08650	0.44	-0.3
1,943,590	+		LRK53_RS08650	0.58	-2.1
1,943,590	+		LRK53_RS08650	0.58	-0.5
1,943,590	+		LRK53_RS08650	0.58	-2.2
1,943,590	+		LRK53_RS08650	0.58	-0.4
1,943,590	+		LRK53_RS08650	0.58	-0.0
1,943,591	-		LRK53_RS08650	0.58	+1.0
1,943,591	-		LRK53_RS08650	0.58	-1.1
1,943,591	-		LRK53_RS08650	0.58	-0.2
1,943,591	-		LRK53_RS08650	0.58	-1.1
1,943,591	-		LRK53_RS08650	0.58	-2.0
1,943,591	-		LRK53_RS08650	0.58	-0.1
1,943,747	+		LRK53_RS08650	0.69	+0.2
1,943,747	+		LRK53_RS08650	0.69	-1.3
1,943,747	+		LRK53_RS08650	0.69	+0.5
1,943,748	-		LRK53_RS08650	0.69	-1.0
1,943,756	+		LRK53_RS08650	0.70	-0.2
1,943,756	+		LRK53_RS08650	0.70	-0.3
1,943,756	+		LRK53_RS08650	0.70	-1.0
1,943,756	+		LRK53_RS08650	0.70	-0.1
1,943,757	-		LRK53_RS08650	0.70	+1.4
1,943,780	+		LRK53_RS08650	0.71	-0.2
1,943,813	+		LRK53_RS08650	0.74	+0.2
1,943,832	+		LRK53_RS08650	0.75	-1.1
1,943,832	+		LRK53_RS08650	0.75	-0.3
1,943,833	-		LRK53_RS08650	0.75	+0.2
1,943,909	+		LRK53_RS08650	0.80	-0.1
1,943,909	+		LRK53_RS08650	0.80	-0.6
1,943,909	+		LRK53_RS08650	0.80	-0.7
1,943,909	+		LRK53_RS08650	0.80	-0.6
1,943,909	+		LRK53_RS08650	0.80	+1.8
1,943,909	+		LRK53_RS08650	0.80	-0.9
1,943,910	-		LRK53_RS08650	0.80	-1.2
1,943,959	+		LRK53_RS08650	0.84	-1.3
1,943,992	+		LRK53_RS08650	0.86	-0.1
1,943,992	+		LRK53_RS08650	0.86	-0.8
1,943,992	+		LRK53_RS08650	0.86	+0.4
1,943,992	+		LRK53_RS08650	0.86	-0.8
1,943,992	+		LRK53_RS08650	0.86	-0.8
1,943,992	+		LRK53_RS08650	0.86	+1.1
1,943,993	-		LRK53_RS08650	0.86	+0.5
1,944,053	+				-0.4
1,944,053	+				-0.4
1,944,054	-				-0.8
1,944,192	+				-1.2
1,944,192	+				-0.3
1,944,192	+				-1.0
1,944,192	+				+1.0
1,944,192	+				-0.2
1,944,192	+				-0.5
1,944,192	+				-0.7
1,944,192	+				-0.2
1,944,193	-				-0.3
1,944,193	-				-0.3
1,944,193	-				-0.6
1,944,193	-				-0.5
1,944,193	-				+1.4
1,944,193	-				-0.5
1,944,193	-				-2.5
1,944,193	-				-2.7
1,944,193	-				-0.5
1,944,193	-				-1.6
1,944,193	-				-0.5
1,944,193	-				+0.0
1,944,314	-				-0.8
1,944,314	-				+0.5
1,944,334	+				-1.2
1,944,334	+				-0.7
1,944,334	+				+0.8
1,944,335	-				-2.0
1,944,562	+		LRK53_RS08655	0.21	+0.8
1,944,562	+		LRK53_RS08655	0.21	-0.6
1,944,562	+		LRK53_RS08655	0.21	+0.1
1,944,562	+		LRK53_RS08655	0.21	-1.9
1,944,562	+		LRK53_RS08655	0.21	-1.2
1,944,562	+		LRK53_RS08655	0.21	-1.9
1,944,562	+		LRK53_RS08655	0.21	-0.6
1,944,562	+		LRK53_RS08655	0.21	-1.2
1,944,562	+		LRK53_RS08655	0.21	-0.8
1,944,562	+		LRK53_RS08655	0.21	-0.3
1,944,562	+		LRK53_RS08655	0.21	-0.5
1,944,563	-		LRK53_RS08655	0.21	-0.6
1,944,811	+		LRK53_RS08655	0.34	-0.3
1,944,811	+		LRK53_RS08655	0.34	-2.1
1,944,811	+		LRK53_RS08655	0.34	-1.1
1,944,811	+		LRK53_RS08655	0.34	-1.0
1,944,811	+		LRK53_RS08655	0.34	+0.4
1,944,811	+		LRK53_RS08655	0.34	-0.3
1,944,812	-		LRK53_RS08655	0.34	+0.5
1,944,812	-		LRK53_RS08655	0.34	-1.5
1,944,812	-		LRK53_RS08655	0.34	+0.7
1,944,892	+		LRK53_RS08655	0.39	+1.0
1,944,892	+		LRK53_RS08655	0.39	-1.3
1,944,893	-		LRK53_RS08655	0.39	-0.0
1,944,893	-		LRK53_RS08655	0.39	+0.0
1,944,973	+		LRK53_RS08655	0.43	-1.7
1,944,973	+		LRK53_RS08655	0.43	-1.7
1,944,973	+		LRK53_RS08655	0.43	-0.5
1,944,973	+		LRK53_RS08655	0.43	-1.4
1,944,973	+		LRK53_RS08655	0.43	+0.5
1,944,973	+		LRK53_RS08655	0.43	-0.8
1,944,974	-		LRK53_RS08655	0.43	-2.1
1,944,974	-		LRK53_RS08655	0.43	+0.1
1,944,974	-		LRK53_RS08655	0.43	+0.8
1,944,974	-		LRK53_RS08655	0.43	-2.2
1,944,974	-		LRK53_RS08655	0.43	-0.6
1,944,974	-		LRK53_RS08655	0.43	-0.6
1,945,000	+		LRK53_RS08655	0.45	-0.5
1,945,000	+		LRK53_RS08655	0.45	+0.2
1,945,000	+		LRK53_RS08655	0.45	-0.5
1,945,000	+		LRK53_RS08655	0.45	-1.6
1,945,000	+		LRK53_RS08655	0.45	-1.4
1,945,000	+		LRK53_RS08655	0.45	-1.0
1,945,001	-		LRK53_RS08655	0.45	+0.0
1,945,001	-		LRK53_RS08655	0.45	-1.1
1,945,087	+		LRK53_RS08655	0.50	+1.2
1,945,088	-		LRK53_RS08655	0.50	+0.2
1,945,088	-		LRK53_RS08655	0.50	-1.1
1,945,093	+		LRK53_RS08655	0.50	-0.7
1,945,093	+		LRK53_RS08655	0.50	-1.1
1,945,093	+		LRK53_RS08655	0.50	+0.8
1,945,093	+		LRK53_RS08655	0.50	+0.1
1,945,093	+		LRK53_RS08655	0.50	+1.0
1,945,093	+		LRK53_RS08655	0.50	+0.6
1,945,093	+		LRK53_RS08655	0.50	-0.4
1,945,093	+		LRK53_RS08655	0.50	-0.7
1,945,094	-		LRK53_RS08655	0.50	-0.7
1,945,094	-		LRK53_RS08655	0.50	-1.3
1,945,094	-		LRK53_RS08655	0.50	+0.6
1,945,094	-		LRK53_RS08655	0.50	-1.1