Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05950

Experiment: Biofilm; Day2; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; pH7
1,374,029	+		LRK53_RS05940	0.87	-0.6
1,374,029	+		LRK53_RS05940	0.87	-2.9
1,374,029	+		LRK53_RS05940	0.87	+0.0
1,374,030	-		LRK53_RS05940	0.87	+0.2
1,374,030	-		LRK53_RS05940	0.87	+0.1
1,374,256	+				-3.1
1,374,256	+				-0.7
1,374,256	+				+0.6
1,374,257	-				+0.7
1,374,257	-				-1.0
1,374,257	-				-0.8
1,374,257	-				+0.7
1,374,257	-				-0.8
1,374,270	+				-0.3
1,374,270	+				-0.1
1,374,270	+				-0.5
1,374,270	+				-0.3
1,374,271	-				-2.2
1,374,271	-				-1.0
1,374,271	-				-2.3
1,374,279	+				-1.1
1,374,279	+				+1.2
1,374,279	+				-0.3
1,374,279	+				-0.8
1,374,279	+				-2.4
1,374,279	+				+0.6
1,374,279	+				-1.0
1,374,279	+				-1.1
1,374,279	+				-0.9
1,374,279	+				-0.7
1,374,279	+				-0.6
1,374,279	+				-1.4
1,374,280	-				-0.4
1,374,280	-				-1.1
1,374,280	-				-0.5
1,374,280	-				-0.3
1,374,280	-				+0.0
1,374,280	-				+0.7
1,374,280	-				-0.1
1,374,293	+				-1.0
1,374,293	+				-1.6
1,374,294	-				-1.8
1,374,294	-				+0.1
1,374,387	+				+0.5
1,374,387	+				-1.0
1,374,387	+				-1.2
1,374,388	-				+1.2
1,374,388	-				-1.2
1,374,388	-				-1.0
1,374,388	-				-1.0
1,374,388	-				+2.4
1,374,388	-				-0.9
1,374,388	-				+0.3
1,374,535	+				+1.1
1,374,535	+				-1.5
1,374,659	+				-0.4
1,374,660	-				-1.7
1,374,711	+				-0.5
1,374,711	+				+0.8
1,374,711	+				+1.7
1,374,711	+				+0.6
1,374,711	+				-0.5
1,374,711	+				+0.7
1,374,711	+				-1.6
1,374,712	-				+1.1
1,374,712	-				-0.0
1,374,712	-				+0.8
1,374,712	-				-0.5
1,374,712	-				-1.6
1,374,712	-				-1.1
1,374,712	-				-0.6
1,374,712	-				-2.9
1,374,712	-				-0.4
1,374,851	+		LRK53_RS05945	0.48	-0.8
1,374,852	-		LRK53_RS05945	0.49	-0.5
1,375,006	+				-0.1
1,375,006	+				+2.6
1,375,006	+				+1.2
1,375,006	+				-0.4
1,375,006	+				-0.4
1,375,006	+				-0.6
1,375,006	+				+0.0
1,375,006	+				-2.1
1,375,006	+				-0.4
1,375,006	+				+2.2
1,375,006	+				-1.5
1,375,007	-				-0.3
1,375,007	-				-0.9
1,375,007	-				-1.2
1,375,007	-				+0.4
1,375,007	-				-0.5
1,375,007	-				+0.1
1,375,007	-				-0.7
1,375,007	-				+0.4
1,375,007	-				+1.2
1,375,007	-				-1.0
1,375,007	-				+0.1
1,375,007	-				-1.3
1,375,007	-				-0.5
1,375,135	+		LRK53_RS05950	0.41	-0.4
1,375,135	+		LRK53_RS05950	0.41	-0.5
1,375,135	+		LRK53_RS05950	0.41	+0.2
1,375,135	+		LRK53_RS05950	0.41	+0.1
1,375,135	+		LRK53_RS05950	0.41	-0.6
1,375,135	+		LRK53_RS05950	0.41	+0.2
1,375,135	+		LRK53_RS05950	0.41	-1.6
1,375,135	+		LRK53_RS05950	0.41	-0.4
1,375,135	+		LRK53_RS05950	0.41	-0.4
1,375,135	+		LRK53_RS05950	0.41	+0.4
1,375,135	+		LRK53_RS05950	0.41	+0.3
1,375,136	-		LRK53_RS05950	0.41	+0.5
1,375,136	-		LRK53_RS05950	0.41	-1.0
1,375,136	-		LRK53_RS05950	0.41	-0.1
1,375,136	-		LRK53_RS05950	0.41	+0.1
1,375,136	-		LRK53_RS05950	0.41	-0.2
1,375,240	+		LRK53_RS05950	0.67	+0.1
1,375,241	-		LRK53_RS05950	0.68	-0.7
1,375,397	+				+0.8
1,375,397	+				-0.4
1,375,397	+				-2.1
1,375,397	+				-0.2
1,375,397	+				+0.7
1,375,398	-				+0.1
1,375,398	-				-2.2
1,375,398	-				-0.5
1,375,469	+				-1.6
1,375,484	+				-0.7
1,375,484	+				+0.1
1,375,484	+				-1.3
1,375,484	+				-0.7
1,375,484	+				+1.8
1,375,484	+				-2.0
1,375,484	+				-0.1
1,375,484	+				+0.0
1,375,485	-				-0.2
1,375,485	-				-1.2
1,375,508	+				+0.7
1,375,508	+				-1.6
1,375,508	+				-0.4
1,375,508	+				-1.7
1,375,508	+				+1.2
1,375,508	+				+0.5
1,375,509	-				-0.9
1,375,509	-				-0.2
1,375,509	-				-0.9
1,375,509	-				-0.2
1,375,509	-				-0.4
1,375,509	-				-1.7
1,375,516	+				+0.1
1,375,516	+				+0.3
1,375,516	+				-0.5
1,375,517	-				+0.1
1,375,517	-				-0.3
1,375,605	+		LRK53_RS05955	0.25	-0.8
1,375,605	+		LRK53_RS05955	0.25	-1.2
1,375,630	+		LRK53_RS05955	0.32	-1.3
1,375,630	+		LRK53_RS05955	0.32	-1.7
1,375,631	-		LRK53_RS05955	0.33	+0.3
1,375,631	-		LRK53_RS05955	0.33	+1.0
1,375,631	-		LRK53_RS05955	0.33	-0.6
1,375,631	-		LRK53_RS05955	0.33	-0.9
1,375,631	-		LRK53_RS05955	0.33	+0.2
1,375,631	-		LRK53_RS05955	0.33	-1.1
1,375,697	+		LRK53_RS05955	0.53	+0.2
1,375,698	-		LRK53_RS05955	0.53	+0.0
1,375,698	-		LRK53_RS05955	0.53	-1.2
1,375,698	-		LRK53_RS05955	0.53	+1.1
1,375,708	+		LRK53_RS05955	0.56	+0.4
1,375,708	+		LRK53_RS05955	0.56	-0.6
1,375,708	+		LRK53_RS05955	0.56	+0.1
1,375,709	-		LRK53_RS05955	0.57	-0.8
1,375,712	+		LRK53_RS05955	0.57	+0.3
1,375,712	+		LRK53_RS05955	0.57	+1.4
1,375,712	+		LRK53_RS05955	0.57	-0.2
1,375,712	+		LRK53_RS05955	0.57	-1.8
1,375,712	+		LRK53_RS05955	0.57	-0.4
1,375,712	+		LRK53_RS05955	0.57	-1.9
1,375,712	+		LRK53_RS05955	0.57	-1.1
1,375,712	+		LRK53_RS05955	0.57	-1.0
1,375,712	+		LRK53_RS05955	0.57	-0.8
1,375,712	+		LRK53_RS05955	0.57	-2.5
1,375,712	+		LRK53_RS05955	0.57	-0.0
1,375,712	+		LRK53_RS05955	0.57	-1.8
1,375,713	-		LRK53_RS05955	0.58	-0.7
1,375,713	-		LRK53_RS05955	0.58	-1.2
1,375,713	-		LRK53_RS05955	0.58	+0.6
1,375,713	-		LRK53_RS05955	0.58	+0.1
1,375,713	-		LRK53_RS05955	0.58	-1.5
1,375,713	-		LRK53_RS05955	0.58	-1.1
1,375,713	-		LRK53_RS05955	0.58	-0.1
1,375,713	-		LRK53_RS05955	0.58	-0.4
1,375,713	-		LRK53_RS05955	0.58	-2.4
1,375,713	-		LRK53_RS05955	0.58	+0.1
1,375,713	-		LRK53_RS05955	0.58	+0.7
1,375,713	-		LRK53_RS05955	0.58	-0.8
1,375,713	-		LRK53_RS05955	0.58	-0.6
1,375,713	-		LRK53_RS05955	0.58	+0.6
1,375,713	-		LRK53_RS05955	0.58	-0.3
1,375,713	-		LRK53_RS05955	0.58	+0.2
1,375,713	-		LRK53_RS05955	0.58	+0.7
1,375,819	+				-1.1
1,375,819	+				+1.2
1,375,819	+				+0.8
1,375,819	+				+0.6
1,375,819	+				+0.7
1,375,820	-				+0.3
1,375,820	-				-1.4
1,375,820	-				-0.7
1,375,820	-				-1.3
1,375,838	+				+0.3
1,375,839	-				-0.9
1,375,839	-				-1.2
1,375,857	+				+0.6
1,375,857	+				-0.8
1,375,857	+				-0.7
1,375,857	+				-0.9
1,375,857	+				+0.4
1,375,857	+				-1.5
1,375,857	+				-1.7
1,375,857	+				-1.3
1,375,857	+				-0.2
1,375,857	+				-1.2
1,375,857	+				-1.2
1,375,857	+				-1.4
1,375,857	+				-2.3
1,375,857	+				-0.2
1,375,857	+				+0.6
1,375,857	+				-0.4
1,375,857	+				-1.5
1,375,857	+				-0.5
1,375,857	+				-0.7
1,375,857	+				-0.6
1,375,857	+				-0.0
1,375,857	+				-1.1
1,375,857	+				-0.5
1,375,857	+				+1.1
1,375,857	+				+0.1
1,375,857	+				-0.2
1,375,857	+				-1.5
1,375,857	+				-0.2
1,375,857	+				-0.4
1,375,857	+				+0.2
1,375,858	-				-0.3
1,375,858	-				+1.2
1,375,858	-				+0.5
1,375,858	-				-0.8
1,375,858	-				-0.2
1,375,858	-				-0.8
1,375,858	-				-0.3
1,375,858	-				-1.0
1,375,858	-				+0.7
1,375,858	-				-1.0
1,375,858	-				+1.0
1,375,858	-				-0.8
1,375,858	-				-1.8
1,375,858	-				+0.9
1,375,858	-				-0.6
1,375,858	-				-0.7
1,375,858	-				+1.4
1,375,858	-				+0.1
1,375,858	-				+1.7
1,375,858	-				-0.3
1,375,858	-				-1.6
1,375,858	-				+1.3
1,375,858	-				+0.1
1,375,859	+				-0.6
1,375,859	+				+0.4
1,375,859	+				+0.1
1,375,859	+				-0.4
1,375,859	+				+0.7
1,375,859	+				-0.9
1,375,859	+				-1.5
1,375,859	+				-0.3
1,375,859	+				+0.1
1,375,859	+				-1.2
1,375,859	+				+0.1
1,375,859	+				+0.2
1,375,859	+				-1.5
1,375,859	+				-0.5
1,375,859	+				-0.0
1,375,859	+				-0.4
1,375,859	+				-0.0
1,375,859	+				-2.5
1,375,859	+				-0.6
1,375,859	+				-0.5
1,375,859	+				-0.4
1,375,859	+				-0.2
1,375,859	+				-1.2
1,375,859	+				-0.4
1,375,859	+				+0.0
1,375,859	+				-0.5
1,375,859	+				-1.3
1,375,859	+				-0.3
1,375,859	+				+1.4
1,375,859	+				+0.2
1,375,859	+				-1.8
1,375,859	+				+0.1
1,375,859	+				+0.2
1,375,859	+				-1.1
1,375,859	+				-1.4
1,375,859	+				-0.2
1,375,859	+				-2.0
1,375,859	+				-0.0
1,375,859	+				-0.1
1,375,859	+				-0.2
1,375,859	+				-0.2
1,375,860	-				-1.8
1,375,860	-				-0.1
1,375,860	-				-0.2
1,375,860	-				-0.5
1,375,860	-				-2.2
1,375,860	-				-1.3
1,375,860	-				+1.2
1,375,860	-				+0.6
1,375,860	-				-0.7
1,375,860	-				+0.2
1,375,860	-				-1.0
1,375,860	-				+0.5
1,375,860	-				+0.1
1,375,860	-				+0.1
1,375,860	-				-0.8
1,375,860	-				-0.8
1,375,860	-				-0.2
1,375,860	-				+0.8
1,375,860	-				-0.4
1,375,860	-				+0.5
1,375,860	-				+0.2
1,375,860	-				-2.2
1,375,860	-				-2.0
1,375,860	-				-0.6
1,375,860	-				+0.4
1,375,860	-				-0.2
1,375,860	-				-0.4
1,375,860	-				-0.9
1,375,860	-				+0.1
1,375,860	-				-1.0
1,375,860	-				-0.4
1,375,860	-				+0.6
1,375,860	-				-0.4
1,375,860	-				+0.2
1,375,860	-				-0.9
1,375,860	-				+0.0
1,375,860	-				-0.8
1,375,860	-				+1.7
1,375,860	-				+0.0
1,375,860	-				+1.7
1,375,860	-				-0.6
1,375,860	-				+0.2
1,375,860	-				+0.6
1,375,860	-				-1.3
1,375,860	-				+0.3
1,375,860	-				-1.5
1,375,860	-				-1.5
1,375,860	-				+0.1
1,375,860	-				-2.0
1,375,860	-				+2.0
1,375,860	-				-1.0
1,375,860	-				-0.2
1,375,860	-				+1.3
1,375,860	-				-0.8
1,375,861	+				-1.7
1,375,861	+				-0.4
1,375,861	+				-0.2
1,375,861	+				-0.7
1,375,861	+				-0.3
1,375,861	+				+0.7
1,375,861	+				+1.3
1,375,861	+				-2.0
1,375,861	+				-0.2
1,375,861	+				-1.7
1,375,861	+				-0.9
1,375,861	+				+0.1
1,375,861	+				-0.3
1,375,861	+				-1.4
1,375,861	+				-0.6
1,375,861	+				-2.3
1,375,861	+				-2.0
1,375,861	+				-1.8
1,375,861	+				-1.6
1,375,861	+				+0.2
1,375,861	+				-1.4
1,375,861	+				+0.4
1,375,861	+				-0.3
1,375,861	+				-1.3
1,375,862	-				+1.4
1,375,862	-				-0.7
1,375,862	-				-0.9
1,375,862	-				-0.2
1,375,862	-				-0.4
1,375,862	-				-0.2
1,375,862	-				-0.2
1,375,862	-				-1.5
1,375,862	-				-1.9
1,375,862	-				-1.4
1,375,862	-				+1.6
1,376,216	+				+2.1
1,376,216	+				+1.4
1,376,216	+				+0.2
1,376,216	+				+0.6
1,376,216	+				-1.8
1,376,216	+				-0.2
1,376,216	+				-0.8
1,376,216	+				-0.8
1,376,216	+				-0.2
1,376,216	+				+0.1
1,376,216	+				+0.7
1,376,217	-				-1.2
1,376,217	-				+0.2
1,376,217	-				-0.2
1,376,217	-				-0.9
1,376,217	-				-0.1
1,376,277	+				+1.0
1,376,277	+				+0.2
1,376,277	+				-0.5
1,376,287	+				-3.4
1,376,287	+				-0.4
1,376,288	-				-0.1
1,376,288	-				-1.4
1,376,304	-				+1.2
1,376,304	-				-0.5
1,376,304	-				-0.0