Strain Fitness in Escherichia coli ECOR38 around HEPCGN_17330

Experiment: Bas39

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas39
2,208,364	-	yqjE	HEPCGN_17315	0.67	-0.0
2,208,583	+	yqjD	HEPCGN_17320	0.27	+0.0
2,208,583	+	yqjD	HEPCGN_17320	0.27	-0.5
2,208,583	+	yqjD	HEPCGN_17320	0.27	+0.1
2,208,584	-	yqjD	HEPCGN_17320	0.27	+0.2
2,208,584	-	yqjD	HEPCGN_17320	0.27	+0.0
2,208,584	-	yqjD	HEPCGN_17320	0.27	+0.2
2,208,686	+	yqjD	HEPCGN_17320	0.60	+0.2
2,208,687	-	yqjD	HEPCGN_17320	0.61	+0.3
2,208,695	+	yqjD	HEPCGN_17320	0.63	-1.1
2,208,731	+	yqjD	HEPCGN_17320	0.75	+0.1
2,208,731	+	yqjD	HEPCGN_17320	0.75	+0.7
2,208,731	+	yqjD	HEPCGN_17320	0.75	-0.8
2,208,807	-				+0.6
2,208,824	+				-0.0
2,208,824	+				+0.3
2,208,836	-				+0.3
2,209,104	-	yqjC	HEPCGN_17325	0.70	-0.0
2,209,123	-	yqjC	HEPCGN_17325	0.76	+0.2
2,209,157	+	yqjC	HEPCGN_17325	0.85	+0.6
2,209,158	-	yqjC	HEPCGN_17325	0.85	+0.4
2,209,158	-	yqjC	HEPCGN_17325	0.85	+0.1
2,209,192	+				+0.2
2,209,205	+				+0.7
2,209,206	-				-0.6
2,209,206	-				+0.9
2,209,244	+				-0.3
2,209,245	-				-0.1
2,209,304	+				-0.5
2,209,305	-				+0.9
2,209,407	-	mzrA	HEPCGN_17330	0.12	-0.7
2,209,441	+	mzrA	HEPCGN_17330	0.21	+0.1
2,209,441	+	mzrA	HEPCGN_17330	0.21	+0.1
2,209,508	+	mzrA	HEPCGN_17330	0.39	-2.3
2,209,508	+	mzrA	HEPCGN_17330	0.39	-0.4
2,209,509	-	mzrA	HEPCGN_17330	0.39	+0.6
2,209,509	-	mzrA	HEPCGN_17330	0.39	-0.5
2,209,539	-	mzrA	HEPCGN_17330	0.47	+0.3
2,209,634	+	mzrA	HEPCGN_17330	0.72	+0.2
2,209,690	-	mzrA	HEPCGN_17330	0.86	-1.2
2,209,690	-	mzrA	HEPCGN_17330	0.86	+0.6
2,209,891	+	mzrA	HEPCGN_17335	0.22	-0.6
2,209,891	+	mzrA	HEPCGN_17335	0.22	+0.7
2,209,891	+	mzrA	HEPCGN_17335	0.22	-1.2
2,209,962	-	mzrA	HEPCGN_17335	0.33	-0.3
2,210,016	-	mzrA	HEPCGN_17335	0.41	-0.2
2,210,029	-	mzrA	HEPCGN_17335	0.43	-0.7
2,210,029	-	mzrA	HEPCGN_17335	0.43	-0.3
2,210,040	+	mzrA	HEPCGN_17335	0.44	+0.2
2,210,051	+	mzrA	HEPCGN_17335	0.46	+0.9
2,210,080	+	mzrA	HEPCGN_17335	0.50	-0.6
2,210,148	-	mzrA	HEPCGN_17335	0.61	+0.2
2,210,149	+	mzrA	HEPCGN_17335	0.61	-0.4
2,210,149	+	mzrA	HEPCGN_17335	0.61	+0.5
2,210,150	-	mzrA	HEPCGN_17335	0.61	-0.6
2,210,323	+	mzrA	HEPCGN_17335	0.87	-0.0
2,210,324	-	mzrA	HEPCGN_17335	0.87	-0.3
2,210,324	-	mzrA	HEPCGN_17335	0.87	+0.3
2,210,448	+	yqiM	HEPCGN_17340	0.23	+0.7
2,210,503	+				+1.2
2,210,504	-				+0.6
2,210,504	-				-2.0
2,210,504	-				-0.8
2,210,523	+				+0.1
2,210,524	-				+0.3
2,210,524	-				+0.3
2,210,620	+				+0.5
2,210,620	+				+0.0
2,210,620	+				-0.5