Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS15685 and A4249_RS15690 are separated by 67 nucleotides A4249_RS15690 and A4249_RS15695 are separated by 163 nucleotides A4249_RS15695 and A4249_RS16700 are separated by 330 nucleotides A4249_RS16700 and A4249_RS15700 overlap by 4 nucleotides
A4249_RS15685: A4249_RS15685 - DUF1206 domain-containing protein, at 3,173,013 to 3,173,870
_RS15685
A4249_RS15690: A4249_RS15690 - DsbA family oxidoreductase, at 3,173,938 to 3,174,603
_RS15690
A4249_RS15695: A4249_RS15695 - hypothetical protein, at 3,174,767 to 3,175,642
_RS15695
A4249_RS16700: A4249_RS16700 - hypothetical protein, at 3,175,973 to 3,176,149
_RS16700
A4249_RS15700: A4249_RS15700 - AAA family ATPase, at 3,176,146 to 3,176,655
_RS15700
Position (kb)
3174
3175
3176 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3173.840 kb on - strand at 3173.863 kb on + strand at 3173.863 kb on + strand at 3173.864 kb on - strand at 3173.864 kb on - strand at 3173.864 kb on - strand at 3173.868 kb on + strand at 3173.868 kb on + strand at 3173.868 kb on + strand at 3173.868 kb on + strand at 3173.868 kb on + strand at 3173.869 kb on - strand at 3173.869 kb on - strand at 3173.869 kb on - strand at 3174.145 kb on + strand, within A4249_RS15690 at 3174.146 kb on - strand, within A4249_RS15690 at 3174.146 kb on - strand, within A4249_RS15690 at 3174.146 kb on - strand, within A4249_RS15690 at 3174.448 kb on + strand, within A4249_RS15690 at 3174.532 kb on + strand, within A4249_RS15690 at 3174.532 kb on + strand, within A4249_RS15690 at 3174.532 kb on + strand, within A4249_RS15690 at 3174.532 kb on + strand, within A4249_RS15690 at 3174.532 kb on + strand, within A4249_RS15690 at 3174.532 kb on + strand, within A4249_RS15690 at 3174.533 kb on - strand, within A4249_RS15690 at 3174.533 kb on - strand, within A4249_RS15690 at 3174.533 kb on - strand, within A4249_RS15690 at 3174.533 kb on - strand, within A4249_RS15690 at 3174.533 kb on - strand, within A4249_RS15690 at 3174.601 kb on + strand at 3174.601 kb on + strand at 3174.601 kb on + strand at 3174.602 kb on - strand at 3174.613 kb on + strand at 3174.613 kb on + strand at 3174.614 kb on - strand at 3174.614 kb on - strand at 3174.614 kb on - strand at 3174.614 kb on - strand at 3174.675 kb on + strand at 3174.676 kb on - strand at 3174.800 kb on + strand at 3174.800 kb on + strand at 3174.800 kb on + strand at 3174.801 kb on - strand at 3174.801 kb on - strand at 3174.801 kb on - strand at 3174.801 kb on - strand at 3174.801 kb on - strand at 3174.801 kb on - strand at 3174.810 kb on - strand at 3174.810 kb on - strand at 3174.885 kb on + strand, within A4249_RS15695 at 3174.886 kb on - strand, within A4249_RS15695 at 3174.886 kb on - strand, within A4249_RS15695 at 3174.886 kb on - strand, within A4249_RS15695 at 3175.155 kb on + strand, within A4249_RS15695 at 3175.156 kb on - strand, within A4249_RS15695 at 3175.156 kb on - strand, within A4249_RS15695 at 3175.281 kb on + strand, within A4249_RS15695 at 3175.281 kb on + strand, within A4249_RS15695 at 3175.281 kb on + strand, within A4249_RS15695 at 3175.281 kb on + strand, within A4249_RS15695 at 3175.281 kb on + strand, within A4249_RS15695 at 3175.281 kb on + strand, within A4249_RS15695 at 3175.320 kb on + strand, within A4249_RS15695 at 3175.320 kb on + strand, within A4249_RS15695 at 3175.366 kb on - strand, within A4249_RS15695 at 3175.515 kb on + strand, within A4249_RS15695 at 3175.515 kb on + strand, within A4249_RS15695 at 3175.515 kb on + strand, within A4249_RS15695 at 3175.515 kb on + strand, within A4249_RS15695 at 3175.515 kb on + strand, within A4249_RS15695 at 3175.515 kb on + strand, within A4249_RS15695 at 3175.515 kb on + strand, within A4249_RS15695 at 3175.516 kb on - strand, within A4249_RS15695 at 3175.584 kb on + strand at 3175.585 kb on - strand at 3175.585 kb on - strand at 3175.623 kb on + strand at 3175.623 kb on + strand at 3175.623 kb on + strand at 3175.623 kb on + strand at 3175.623 kb on + strand at 3175.624 kb on - strand at 3175.624 kb on - strand at 3175.624 kb on - strand at 3175.624 kb on - strand at 3175.624 kb on - strand at 3175.624 kb on - strand at 3175.624 kb on - strand at 3175.693 kb on - strand at 3175.693 kb on - strand at 3175.693 kb on - strand at 3175.719 kb on - strand at 3175.719 kb on - strand at 3175.780 kb on + strand at 3175.780 kb on + strand at 3175.780 kb on + strand at 3175.780 kb on + strand at 3175.780 kb on + strand at 3175.781 kb on - strand at 3175.781 kb on - strand at 3175.781 kb on - strand at 3175.781 kb on - strand at 3175.781 kb on - strand at 3175.785 kb on - strand at 3175.785 kb on - strand at 3175.785 kb on - strand at 3175.793 kb on + strand at 3175.974 kb on + strand at 3175.974 kb on + strand at 3175.974 kb on + strand at 3175.975 kb on - strand at 3175.975 kb on - strand at 3175.975 kb on - strand at 3175.975 kb on - strand at 3175.975 kb on - strand at 3176.164 kb on + strand at 3176.164 kb on + strand at 3176.164 kb on + strand at 3176.164 kb on + strand at 3176.164 kb on + strand at 3176.164 kb on + strand at 3176.164 kb on + strand at 3176.164 kb on + strand at 3176.164 kb on + strand at 3176.164 kb on + strand at 3176.165 kb on - strand at 3176.165 kb on - strand at 3176.165 kb on - strand at 3176.165 kb on - strand at 3176.195 kb on + strand at 3176.195 kb on + strand at 3176.195 kb on + strand at 3176.225 kb on + strand, within A4249_RS15700 at 3176.225 kb on + strand, within A4249_RS15700 at 3176.225 kb on + strand, within A4249_RS15700 at 3176.225 kb on + strand, within A4249_RS15700 at 3176.225 kb on + strand, within A4249_RS15700 at 3176.225 kb on + strand, within A4249_RS15700 at 3176.225 kb on + strand, within A4249_RS15700 at 3176.225 kb on + strand, within A4249_RS15700 at 3176.226 kb on - strand, within A4249_RS15700 at 3176.226 kb on - strand, within A4249_RS15700 at 3176.226 kb on - strand, within A4249_RS15700 at 3176.226 kb on - strand, within A4249_RS15700 at 3176.226 kb on - strand, within A4249_RS15700 at 3176.226 kb on - strand, within A4249_RS15700 at 3176.241 kb on - strand, within A4249_RS15700 at 3176.333 kb on + strand, within A4249_RS15700 at 3176.334 kb on - strand, within A4249_RS15700 at 3176.357 kb on + strand, within A4249_RS15700 at 3176.357 kb on + strand, within A4249_RS15700 at 3176.357 kb on + strand, within A4249_RS15700 at 3176.357 kb on + strand, within A4249_RS15700 at 3176.358 kb on - strand, within A4249_RS15700 at 3176.358 kb on - strand, within A4249_RS15700
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 3,173,840 - +0.9 3,173,863 + -1.4 3,173,863 + -0.4 3,173,864 - -0.3 3,173,864 - +0.6 3,173,864 - -0.6 3,173,868 + -0.4 3,173,868 + +0.6 3,173,868 + +0.6 3,173,868 + +0.3 3,173,868 + -0.0 3,173,869 - +1.0 3,173,869 - -1.5 3,173,869 - -0.5 3,174,145 + A4249_RS15690 0.31 +0.6 3,174,146 - A4249_RS15690 0.31 +0.8 3,174,146 - A4249_RS15690 0.31 -0.2 3,174,146 - A4249_RS15690 0.31 -0.2 3,174,448 + A4249_RS15690 0.77 -0.6 3,174,532 + A4249_RS15690 0.89 -0.3 3,174,532 + A4249_RS15690 0.89 -0.6 3,174,532 + A4249_RS15690 0.89 +0.4 3,174,532 + A4249_RS15690 0.89 -0.4 3,174,532 + A4249_RS15690 0.89 -0.2 3,174,532 + A4249_RS15690 0.89 -0.1 3,174,533 - A4249_RS15690 0.89 -0.0 3,174,533 - A4249_RS15690 0.89 -0.5 3,174,533 - A4249_RS15690 0.89 -0.5 3,174,533 - A4249_RS15690 0.89 -1.0 3,174,533 - A4249_RS15690 0.89 -1.4 3,174,601 + +0.3 3,174,601 + +0.9 3,174,601 + +0.4 3,174,602 - -0.8 3,174,613 + +2.3 3,174,613 + -0.1 3,174,614 - -0.2 3,174,614 - +0.4 3,174,614 - -1.1 3,174,614 - -0.7 3,174,675 + +0.4 3,174,676 - -0.3 3,174,800 + +0.7 3,174,800 + +0.8 3,174,800 + +0.5 3,174,801 - -0.9 3,174,801 - +0.4 3,174,801 - -0.6 3,174,801 - -0.6 3,174,801 - -1.6 3,174,801 - +0.1 3,174,810 - +1.4 3,174,810 - -0.0 3,174,885 + A4249_RS15695 0.13 +1.2 3,174,886 - A4249_RS15695 0.14 +0.0 3,174,886 - A4249_RS15695 0.14 -0.4 3,174,886 - A4249_RS15695 0.14 -1.4 3,175,155 + A4249_RS15695 0.44 -0.2 3,175,156 - A4249_RS15695 0.44 +0.6 3,175,156 - A4249_RS15695 0.44 +0.3 3,175,281 + A4249_RS15695 0.59 -0.1 3,175,281 + A4249_RS15695 0.59 -0.9 3,175,281 + A4249_RS15695 0.59 -2.6 3,175,281 + A4249_RS15695 0.59 -0.3 3,175,281 + A4249_RS15695 0.59 -1.6 3,175,281 + A4249_RS15695 0.59 -1.7 3,175,320 + A4249_RS15695 0.63 +0.4 3,175,320 + A4249_RS15695 0.63 +1.0 3,175,366 - A4249_RS15695 0.68 +0.4 3,175,515 + A4249_RS15695 0.85 -0.6 3,175,515 + A4249_RS15695 0.85 +0.4 3,175,515 + A4249_RS15695 0.85 -2.2 3,175,515 + A4249_RS15695 0.85 -1.1 3,175,515 + A4249_RS15695 0.85 -0.4 3,175,515 + A4249_RS15695 0.85 -0.3 3,175,515 + A4249_RS15695 0.85 -0.0 3,175,516 - A4249_RS15695 0.86 +0.0 3,175,584 + +0.2 3,175,585 - +0.3 3,175,585 - +0.1 3,175,623 + +0.4 3,175,623 + +0.3 3,175,623 + -0.5 3,175,623 + -0.2 3,175,623 + +0.3 3,175,624 - +0.8 3,175,624 - +0.1 3,175,624 - -1.2 3,175,624 - -0.4 3,175,624 - +0.2 3,175,624 - -0.7 3,175,624 - -0.1 3,175,693 - -0.4 3,175,693 - +2.0 3,175,693 - -0.2 3,175,719 - -1.2 3,175,719 - +0.0 3,175,780 + +0.3 3,175,780 + -0.4 3,175,780 + -0.5 3,175,780 + -0.4 3,175,780 + -0.2 3,175,781 - -1.5 3,175,781 - +0.8 3,175,781 - +0.0 3,175,781 - -0.8 3,175,781 - +0.3 3,175,785 - +0.4 3,175,785 - -0.2 3,175,785 - -0.5 3,175,793 + +0.4 3,175,974 + +0.4 3,175,974 + +0.6 3,175,974 + +0.4 3,175,975 - +0.3 3,175,975 - +0.1 3,175,975 - -0.2 3,175,975 - -0.3 3,175,975 - -1.0 3,176,164 + +1.5 3,176,164 + +0.0 3,176,164 + +0.1 3,176,164 + +0.7 3,176,164 + +0.6 3,176,164 + -0.8 3,176,164 + -0.2 3,176,164 + -0.2 3,176,164 + -0.2 3,176,164 + +0.1 3,176,165 - -0.1 3,176,165 - -0.1 3,176,165 - -0.0 3,176,165 - +0.1 3,176,195 + +0.4 3,176,195 + -0.7 3,176,195 + -0.1 3,176,225 + A4249_RS15700 0.15 -0.3 3,176,225 + A4249_RS15700 0.15 +0.4 3,176,225 + A4249_RS15700 0.15 +0.2 3,176,225 + A4249_RS15700 0.15 -0.8 3,176,225 + A4249_RS15700 0.15 -0.3 3,176,225 + A4249_RS15700 0.15 +0.1 3,176,225 + A4249_RS15700 0.15 -0.7 3,176,225 + A4249_RS15700 0.15 +0.3 3,176,226 - A4249_RS15700 0.16 +0.7 3,176,226 - A4249_RS15700 0.16 -0.0 3,176,226 - A4249_RS15700 0.16 -0.4 3,176,226 - A4249_RS15700 0.16 -1.4 3,176,226 - A4249_RS15700 0.16 -1.5 3,176,226 - A4249_RS15700 0.16 -0.2 3,176,241 - A4249_RS15700 0.19 -0.3 3,176,333 + A4249_RS15700 0.37 +0.6 3,176,334 - A4249_RS15700 0.37 +0.3 3,176,357 + A4249_RS15700 0.41 -1.8 3,176,357 + A4249_RS15700 0.41 -0.3 3,176,357 + A4249_RS15700 0.41 +1.5 3,176,357 + A4249_RS15700 0.41 -0.2 3,176,358 - A4249_RS15700 0.42 -0.5 3,176,358 - A4249_RS15700 0.42 +0.0
Or see this region's nucleotide sequence