Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15695

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS15685 and A4249_RS15690 are separated by 67 nucleotidesA4249_RS15690 and A4249_RS15695 are separated by 163 nucleotidesA4249_RS15695 and A4249_RS16700 are separated by 330 nucleotidesA4249_RS16700 and A4249_RS15700 overlap by 4 nucleotides A4249_RS15685: A4249_RS15685 - DUF1206 domain-containing protein, at 3,173,013 to 3,173,870 _RS15685 A4249_RS15690: A4249_RS15690 - DsbA family oxidoreductase, at 3,173,938 to 3,174,603 _RS15690 A4249_RS15695: A4249_RS15695 - hypothetical protein, at 3,174,767 to 3,175,642 _RS15695 A4249_RS16700: A4249_RS16700 - hypothetical protein, at 3,175,973 to 3,176,149 _RS16700 A4249_RS15700: A4249_RS15700 - AAA family ATPase, at 3,176,146 to 3,176,655 _RS15700 Position (kb) 3174 3175 3176Strain fitness (log2 ratio) -2 -1 0 1 2at 3173.840 kb on - strandat 3173.863 kb on + strandat 3173.863 kb on + strandat 3173.864 kb on - strandat 3173.864 kb on - strandat 3173.864 kb on - strandat 3173.868 kb on + strandat 3173.868 kb on + strandat 3173.868 kb on + strandat 3173.868 kb on + strandat 3173.868 kb on + strandat 3173.869 kb on - strandat 3173.869 kb on - strandat 3173.869 kb on - strandat 3174.145 kb on + strand, within A4249_RS15690at 3174.146 kb on - strand, within A4249_RS15690at 3174.146 kb on - strand, within A4249_RS15690at 3174.146 kb on - strand, within A4249_RS15690at 3174.448 kb on + strand, within A4249_RS15690at 3174.532 kb on + strand, within A4249_RS15690at 3174.532 kb on + strand, within A4249_RS15690at 3174.532 kb on + strand, within A4249_RS15690at 3174.532 kb on + strand, within A4249_RS15690at 3174.532 kb on + strand, within A4249_RS15690at 3174.532 kb on + strand, within A4249_RS15690at 3174.533 kb on - strand, within A4249_RS15690at 3174.533 kb on - strand, within A4249_RS15690at 3174.533 kb on - strand, within A4249_RS15690at 3174.533 kb on - strand, within A4249_RS15690at 3174.533 kb on - strand, within A4249_RS15690at 3174.601 kb on + strandat 3174.601 kb on + strandat 3174.601 kb on + strandat 3174.602 kb on - strandat 3174.613 kb on + strandat 3174.613 kb on + strandat 3174.614 kb on - strandat 3174.614 kb on - strandat 3174.614 kb on - strandat 3174.614 kb on - strandat 3174.675 kb on + strandat 3174.676 kb on - strandat 3174.800 kb on + strandat 3174.800 kb on + strandat 3174.800 kb on + strandat 3174.801 kb on - strandat 3174.801 kb on - strandat 3174.801 kb on - strandat 3174.801 kb on - strandat 3174.801 kb on - strandat 3174.801 kb on - strandat 3174.810 kb on - strandat 3174.810 kb on - strandat 3174.885 kb on + strand, within A4249_RS15695at 3174.886 kb on - strand, within A4249_RS15695at 3174.886 kb on - strand, within A4249_RS15695at 3174.886 kb on - strand, within A4249_RS15695at 3175.155 kb on + strand, within A4249_RS15695at 3175.156 kb on - strand, within A4249_RS15695at 3175.156 kb on - strand, within A4249_RS15695at 3175.281 kb on + strand, within A4249_RS15695at 3175.281 kb on + strand, within A4249_RS15695at 3175.281 kb on + strand, within A4249_RS15695at 3175.281 kb on + strand, within A4249_RS15695at 3175.281 kb on + strand, within A4249_RS15695at 3175.281 kb on + strand, within A4249_RS15695at 3175.320 kb on + strand, within A4249_RS15695at 3175.320 kb on + strand, within A4249_RS15695at 3175.366 kb on - strand, within A4249_RS15695at 3175.515 kb on + strand, within A4249_RS15695at 3175.515 kb on + strand, within A4249_RS15695at 3175.515 kb on + strand, within A4249_RS15695at 3175.515 kb on + strand, within A4249_RS15695at 3175.515 kb on + strand, within A4249_RS15695at 3175.515 kb on + strand, within A4249_RS15695at 3175.515 kb on + strand, within A4249_RS15695at 3175.516 kb on - strand, within A4249_RS15695at 3175.584 kb on + strandat 3175.585 kb on - strandat 3175.585 kb on - strandat 3175.623 kb on + strandat 3175.623 kb on + strandat 3175.623 kb on + strandat 3175.623 kb on + strandat 3175.623 kb on + strandat 3175.624 kb on - strandat 3175.624 kb on - strandat 3175.624 kb on - strandat 3175.624 kb on - strandat 3175.624 kb on - strandat 3175.624 kb on - strandat 3175.624 kb on - strandat 3175.693 kb on - strandat 3175.693 kb on - strandat 3175.693 kb on - strandat 3175.719 kb on - strandat 3175.719 kb on - strandat 3175.780 kb on + strandat 3175.780 kb on + strandat 3175.780 kb on + strandat 3175.780 kb on + strandat 3175.780 kb on + strandat 3175.781 kb on - strandat 3175.781 kb on - strandat 3175.781 kb on - strandat 3175.781 kb on - strandat 3175.781 kb on - strandat 3175.785 kb on - strandat 3175.785 kb on - strandat 3175.785 kb on - strandat 3175.793 kb on + strandat 3175.974 kb on + strandat 3175.974 kb on + strandat 3175.974 kb on + strandat 3175.975 kb on - strandat 3175.975 kb on - strandat 3175.975 kb on - strandat 3175.975 kb on - strandat 3175.975 kb on - strandat 3176.164 kb on + strandat 3176.164 kb on + strandat 3176.164 kb on + strandat 3176.164 kb on + strandat 3176.164 kb on + strandat 3176.164 kb on + strandat 3176.164 kb on + strandat 3176.164 kb on + strandat 3176.164 kb on + strandat 3176.164 kb on + strandat 3176.165 kb on - strandat 3176.165 kb on - strandat 3176.165 kb on - strandat 3176.165 kb on - strandat 3176.195 kb on + strandat 3176.195 kb on + strandat 3176.195 kb on + strandat 3176.225 kb on + strand, within A4249_RS15700at 3176.225 kb on + strand, within A4249_RS15700at 3176.225 kb on + strand, within A4249_RS15700at 3176.225 kb on + strand, within A4249_RS15700at 3176.225 kb on + strand, within A4249_RS15700at 3176.225 kb on + strand, within A4249_RS15700at 3176.225 kb on + strand, within A4249_RS15700at 3176.225 kb on + strand, within A4249_RS15700at 3176.226 kb on - strand, within A4249_RS15700at 3176.226 kb on - strand, within A4249_RS15700at 3176.226 kb on - strand, within A4249_RS15700at 3176.226 kb on - strand, within A4249_RS15700at 3176.226 kb on - strand, within A4249_RS15700at 3176.226 kb on - strand, within A4249_RS15700at 3176.241 kb on - strand, within A4249_RS15700at 3176.333 kb on + strand, within A4249_RS15700at 3176.334 kb on - strand, within A4249_RS15700at 3176.357 kb on + strand, within A4249_RS15700at 3176.357 kb on + strand, within A4249_RS15700at 3176.357 kb on + strand, within A4249_RS15700at 3176.357 kb on + strand, within A4249_RS15700at 3176.358 kb on - strand, within A4249_RS15700at 3176.358 kb on - strand, within A4249_RS15700

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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3,173,840 - +0.9
3,173,863 + -1.4
3,173,863 + -0.4
3,173,864 - -0.3
3,173,864 - +0.6
3,173,864 - -0.6
3,173,868 + -0.4
3,173,868 + +0.6
3,173,868 + +0.6
3,173,868 + +0.3
3,173,868 + -0.0
3,173,869 - +1.0
3,173,869 - -1.5
3,173,869 - -0.5
3,174,145 + A4249_RS15690 0.31 +0.6
3,174,146 - A4249_RS15690 0.31 +0.8
3,174,146 - A4249_RS15690 0.31 -0.2
3,174,146 - A4249_RS15690 0.31 -0.2
3,174,448 + A4249_RS15690 0.77 -0.6
3,174,532 + A4249_RS15690 0.89 -0.3
3,174,532 + A4249_RS15690 0.89 -0.6
3,174,532 + A4249_RS15690 0.89 +0.4
3,174,532 + A4249_RS15690 0.89 -0.4
3,174,532 + A4249_RS15690 0.89 -0.2
3,174,532 + A4249_RS15690 0.89 -0.1
3,174,533 - A4249_RS15690 0.89 -0.0
3,174,533 - A4249_RS15690 0.89 -0.5
3,174,533 - A4249_RS15690 0.89 -0.5
3,174,533 - A4249_RS15690 0.89 -1.0
3,174,533 - A4249_RS15690 0.89 -1.4
3,174,601 + +0.3
3,174,601 + +0.9
3,174,601 + +0.4
3,174,602 - -0.8
3,174,613 + +2.3
3,174,613 + -0.1
3,174,614 - -0.2
3,174,614 - +0.4
3,174,614 - -1.1
3,174,614 - -0.7
3,174,675 + +0.4
3,174,676 - -0.3
3,174,800 + +0.7
3,174,800 + +0.8
3,174,800 + +0.5
3,174,801 - -0.9
3,174,801 - +0.4
3,174,801 - -0.6
3,174,801 - -0.6
3,174,801 - -1.6
3,174,801 - +0.1
3,174,810 - +1.4
3,174,810 - -0.0
3,174,885 + A4249_RS15695 0.13 +1.2
3,174,886 - A4249_RS15695 0.14 +0.0
3,174,886 - A4249_RS15695 0.14 -0.4
3,174,886 - A4249_RS15695 0.14 -1.4
3,175,155 + A4249_RS15695 0.44 -0.2
3,175,156 - A4249_RS15695 0.44 +0.6
3,175,156 - A4249_RS15695 0.44 +0.3
3,175,281 + A4249_RS15695 0.59 -0.1
3,175,281 + A4249_RS15695 0.59 -0.9
3,175,281 + A4249_RS15695 0.59 -2.6
3,175,281 + A4249_RS15695 0.59 -0.3
3,175,281 + A4249_RS15695 0.59 -1.6
3,175,281 + A4249_RS15695 0.59 -1.7
3,175,320 + A4249_RS15695 0.63 +0.4
3,175,320 + A4249_RS15695 0.63 +1.0
3,175,366 - A4249_RS15695 0.68 +0.4
3,175,515 + A4249_RS15695 0.85 -0.6
3,175,515 + A4249_RS15695 0.85 +0.4
3,175,515 + A4249_RS15695 0.85 -2.2
3,175,515 + A4249_RS15695 0.85 -1.1
3,175,515 + A4249_RS15695 0.85 -0.4
3,175,515 + A4249_RS15695 0.85 -0.3
3,175,515 + A4249_RS15695 0.85 -0.0
3,175,516 - A4249_RS15695 0.86 +0.0
3,175,584 + +0.2
3,175,585 - +0.3
3,175,585 - +0.1
3,175,623 + +0.4
3,175,623 + +0.3
3,175,623 + -0.5
3,175,623 + -0.2
3,175,623 + +0.3
3,175,624 - +0.8
3,175,624 - +0.1
3,175,624 - -1.2
3,175,624 - -0.4
3,175,624 - +0.2
3,175,624 - -0.7
3,175,624 - -0.1
3,175,693 - -0.4
3,175,693 - +2.0
3,175,693 - -0.2
3,175,719 - -1.2
3,175,719 - +0.0
3,175,780 + +0.3
3,175,780 + -0.4
3,175,780 + -0.5
3,175,780 + -0.4
3,175,780 + -0.2
3,175,781 - -1.5
3,175,781 - +0.8
3,175,781 - +0.0
3,175,781 - -0.8
3,175,781 - +0.3
3,175,785 - +0.4
3,175,785 - -0.2
3,175,785 - -0.5
3,175,793 + +0.4
3,175,974 + +0.4
3,175,974 + +0.6
3,175,974 + +0.4
3,175,975 - +0.3
3,175,975 - +0.1
3,175,975 - -0.2
3,175,975 - -0.3
3,175,975 - -1.0
3,176,164 + +1.5
3,176,164 + +0.0
3,176,164 + +0.1
3,176,164 + +0.7
3,176,164 + +0.6
3,176,164 + -0.8
3,176,164 + -0.2
3,176,164 + -0.2
3,176,164 + -0.2
3,176,164 + +0.1
3,176,165 - -0.1
3,176,165 - -0.1
3,176,165 - -0.0
3,176,165 - +0.1
3,176,195 + +0.4
3,176,195 + -0.7
3,176,195 + -0.1
3,176,225 + A4249_RS15700 0.15 -0.3
3,176,225 + A4249_RS15700 0.15 +0.4
3,176,225 + A4249_RS15700 0.15 +0.2
3,176,225 + A4249_RS15700 0.15 -0.8
3,176,225 + A4249_RS15700 0.15 -0.3
3,176,225 + A4249_RS15700 0.15 +0.1
3,176,225 + A4249_RS15700 0.15 -0.7
3,176,225 + A4249_RS15700 0.15 +0.3
3,176,226 - A4249_RS15700 0.16 +0.7
3,176,226 - A4249_RS15700 0.16 -0.0
3,176,226 - A4249_RS15700 0.16 -0.4
3,176,226 - A4249_RS15700 0.16 -1.4
3,176,226 - A4249_RS15700 0.16 -1.5
3,176,226 - A4249_RS15700 0.16 -0.2
3,176,241 - A4249_RS15700 0.19 -0.3
3,176,333 + A4249_RS15700 0.37 +0.6
3,176,334 - A4249_RS15700 0.37 +0.3
3,176,357 + A4249_RS15700 0.41 -1.8
3,176,357 + A4249_RS15700 0.41 -0.3
3,176,357 + A4249_RS15700 0.41 +1.5
3,176,357 + A4249_RS15700 0.41 -0.2
3,176,358 - A4249_RS15700 0.42 -0.5
3,176,358 - A4249_RS15700 0.42 +0.0

Or see this region's nucleotide sequence