Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15450

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS15445 and A4249_RS15450 are separated by 26 nucleotidesA4249_RS15450 and A4249_RS15455 overlap by 8 nucleotidesA4249_RS15455 and A4249_RS15460 are separated by 6 nucleotides A4249_RS15445: A4249_RS15445 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 3,128,162 to 3,129,349 _RS15445 A4249_RS15450: A4249_RS15450 - NAD(P)-dependent glycerol-3-phosphate dehydrogenase, at 3,129,376 to 3,130,374 _RS15450 A4249_RS15455: A4249_RS15455 - Rieske (2Fe-2S) protein, at 3,130,367 to 3,130,750 _RS15455 A4249_RS15460: A4249_RS15460 - polyphosphate kinase 2, at 3,130,757 to 3,131,506 _RS15460 Position (kb) 3129 3130 3131Strain fitness (log2 ratio) -2 -1 0 1at 3129.355 kb on - strandat 3130.599 kb on - strand, within A4249_RS15455at 3130.599 kb on - strand, within A4249_RS15455at 3130.857 kb on + strand, within A4249_RS15460at 3130.857 kb on + strand, within A4249_RS15460at 3130.857 kb on + strand, within A4249_RS15460at 3130.858 kb on - strand, within A4249_RS15460at 3130.920 kb on + strand, within A4249_RS15460at 3130.921 kb on - strand, within A4249_RS15460at 3130.921 kb on - strand, within A4249_RS15460at 3130.965 kb on + strand, within A4249_RS15460at 3130.965 kb on + strand, within A4249_RS15460at 3130.966 kb on - strand, within A4249_RS15460at 3130.966 kb on - strand, within A4249_RS15460at 3130.966 kb on - strand, within A4249_RS15460at 3131.176 kb on - strand, within A4249_RS15460at 3131.208 kb on + strand, within A4249_RS15460at 3131.263 kb on - strand, within A4249_RS15460at 3131.263 kb on - strand, within A4249_RS15460at 3131.263 kb on - strand, within A4249_RS15460at 3131.263 kb on - strand, within A4249_RS15460at 3131.263 kb on - strand, within A4249_RS15460at 3131.274 kb on + strand, within A4249_RS15460at 3131.275 kb on - strand, within A4249_RS15460at 3131.275 kb on - strand, within A4249_RS15460at 3131.275 kb on - strand, within A4249_RS15460at 3131.276 kb on - strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.341 kb on + strand, within A4249_RS15460at 3131.342 kb on - strand, within A4249_RS15460at 3131.342 kb on - strand, within A4249_RS15460at 3131.342 kb on - strand, within A4249_RS15460at 3131.342 kb on - strand, within A4249_RS15460at 3131.342 kb on - strand, within A4249_RS15460at 3131.342 kb on - strand, within A4249_RS15460at 3131.342 kb on - strand, within A4249_RS15460at 3131.342 kb on - strand, within A4249_RS15460at 3131.342 kb on - strand, within A4249_RS15460at 3131.342 kb on - strand, within A4249_RS15460at 3131.342 kb on - strand, within A4249_RS15460at 3131.342 kb on - strand, within A4249_RS15460at 3131.342 kb on - strand, within A4249_RS15460at 3131.342 kb on - strand, within A4249_RS15460at 3131.342 kb on - strand, within A4249_RS15460at 3131.342 kb on - strand, within A4249_RS15460

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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3,129,355 - -0.6
3,130,599 - A4249_RS15455 0.60 -0.0
3,130,599 - A4249_RS15455 0.60 -0.8
3,130,857 + A4249_RS15460 0.13 -0.4
3,130,857 + A4249_RS15460 0.13 +0.4
3,130,857 + A4249_RS15460 0.13 -0.6
3,130,858 - A4249_RS15460 0.13 +1.6
3,130,920 + A4249_RS15460 0.22 +1.1
3,130,921 - A4249_RS15460 0.22 +0.2
3,130,921 - A4249_RS15460 0.22 -0.4
3,130,965 + A4249_RS15460 0.28 -1.7
3,130,965 + A4249_RS15460 0.28 -0.8
3,130,966 - A4249_RS15460 0.28 -0.2
3,130,966 - A4249_RS15460 0.28 +1.2
3,130,966 - A4249_RS15460 0.28 +0.0
3,131,176 - A4249_RS15460 0.56 +1.6
3,131,208 + A4249_RS15460 0.60 -1.8
3,131,263 - A4249_RS15460 0.67 -0.3
3,131,263 - A4249_RS15460 0.67 -1.4
3,131,263 - A4249_RS15460 0.67 -0.3
3,131,263 - A4249_RS15460 0.67 +0.4
3,131,263 - A4249_RS15460 0.67 +0.2
3,131,274 + A4249_RS15460 0.69 -0.0
3,131,275 - A4249_RS15460 0.69 +0.5
3,131,275 - A4249_RS15460 0.69 +0.1
3,131,275 - A4249_RS15460 0.69 +0.8
3,131,276 - A4249_RS15460 0.69 -0.8
3,131,341 + A4249_RS15460 0.78 +0.9
3,131,341 + A4249_RS15460 0.78 -0.6
3,131,341 + A4249_RS15460 0.78 +0.2
3,131,341 + A4249_RS15460 0.78 +0.6
3,131,341 + A4249_RS15460 0.78 -0.1
3,131,341 + A4249_RS15460 0.78 +0.0
3,131,341 + A4249_RS15460 0.78 -0.6
3,131,341 + A4249_RS15460 0.78 +0.6
3,131,341 + A4249_RS15460 0.78 -0.9
3,131,341 + A4249_RS15460 0.78 +0.4
3,131,341 + A4249_RS15460 0.78 -2.4
3,131,341 + A4249_RS15460 0.78 +0.3
3,131,341 + A4249_RS15460 0.78 -0.0
3,131,341 + A4249_RS15460 0.78 +0.7
3,131,341 + A4249_RS15460 0.78 +1.2
3,131,341 + A4249_RS15460 0.78 +0.0
3,131,341 + A4249_RS15460 0.78 -0.4
3,131,341 + A4249_RS15460 0.78 -0.4
3,131,342 - A4249_RS15460 0.78 -0.2
3,131,342 - A4249_RS15460 0.78 -0.5
3,131,342 - A4249_RS15460 0.78 -0.3
3,131,342 - A4249_RS15460 0.78 -0.4
3,131,342 - A4249_RS15460 0.78 -0.6
3,131,342 - A4249_RS15460 0.78 -0.7
3,131,342 - A4249_RS15460 0.78 -0.2
3,131,342 - A4249_RS15460 0.78 -0.0
3,131,342 - A4249_RS15460 0.78 +0.2
3,131,342 - A4249_RS15460 0.78 -0.6
3,131,342 - A4249_RS15460 0.78 -0.5
3,131,342 - A4249_RS15460 0.78 +0.0
3,131,342 - A4249_RS15460 0.78 +0.4
3,131,342 - A4249_RS15460 0.78 -0.2
3,131,342 - A4249_RS15460 0.78 +0.1
3,131,342 - A4249_RS15460 0.78 -0.1

Or see this region's nucleotide sequence