Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13640

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13635 and A4249_RS13640 are separated by 175 nucleotidesA4249_RS13640 and A4249_RS13645 overlap by 4 nucleotidesA4249_RS13645 and A4249_RS13650 are separated by 72 nucleotides A4249_RS13635: A4249_RS13635 - molecular chaperone DnaK, at 2,754,924 to 2,756,831 _RS13635 A4249_RS13640: A4249_RS13640 - molecular chaperone DnaJ, at 2,757,007 to 2,758,209 _RS13640 A4249_RS13645: A4249_RS13645 - 4-hydroxy-tetrahydrodipicolinate reductase, at 2,758,206 to 2,758,955 _RS13645 A4249_RS13650: A4249_RS13650 - DNA polymerase III subunit epsilon, at 2,759,028 to 2,759,750 _RS13650 Position (kb) 2757 2758 2759Strain fitness (log2 ratio) -2 -1 0 1 2at 2756.715 kb on + strandat 2756.715 kb on + strandat 2756.715 kb on + strandat 2756.716 kb on - strandat 2756.716 kb on - strandat 2756.716 kb on - strandat 2756.716 kb on - strandat 2756.716 kb on - strandat 2756.716 kb on - strandat 2756.716 kb on - strandat 2756.716 kb on - strandat 2756.716 kb on - strandat 2756.856 kb on - strandat 2756.878 kb on - strandat 2756.959 kb on + strandat 2756.989 kb on + strandat 2756.989 kb on + strandat 2756.989 kb on + strandat 2756.989 kb on + strandat 2756.990 kb on - strandat 2756.990 kb on - strandat 2756.990 kb on - strandat 2756.990 kb on - strandat 2756.990 kb on - strandat 2757.764 kb on + strand, within A4249_RS13640at 2757.766 kb on + strand, within A4249_RS13640at 2757.766 kb on + strand, within A4249_RS13640at 2757.766 kb on + strand, within A4249_RS13640at 2757.766 kb on + strand, within A4249_RS13640at 2757.766 kb on + strand, within A4249_RS13640at 2757.767 kb on - strand, within A4249_RS13640at 2757.767 kb on - strand, within A4249_RS13640at 2757.767 kb on - strand, within A4249_RS13640at 2757.767 kb on - strand, within A4249_RS13640at 2758.954 kb on - strandat 2758.954 kb on - strandat 2758.954 kb on - strandat 2759.018 kb on + strandat 2759.018 kb on + strandat 2759.018 kb on + strandat 2759.018 kb on + strandat 2759.018 kb on + strandat 2759.018 kb on + strandat 2759.018 kb on + strandat 2759.018 kb on + strandat 2759.018 kb on + strandat 2759.018 kb on + strandat 2759.018 kb on + strandat 2759.018 kb on + strandat 2759.019 kb on - strandat 2759.019 kb on - strandat 2759.019 kb on - strandat 2759.019 kb on - strandat 2759.030 kb on - strandat 2759.059 kb on + strandat 2759.085 kb on - strandat 2759.085 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,756,715 + -0.1
2,756,715 + -0.5
2,756,715 + +0.6
2,756,716 - +0.8
2,756,716 - +1.2
2,756,716 - -0.0
2,756,716 - +0.6
2,756,716 - +1.5
2,756,716 - -0.2
2,756,716 - -0.5
2,756,716 - -1.3
2,756,716 - +2.0
2,756,856 - +0.3
2,756,878 - -1.8
2,756,959 + +0.4
2,756,989 + -0.1
2,756,989 + +0.2
2,756,989 + +0.5
2,756,989 + -0.2
2,756,990 - -1.6
2,756,990 - +0.4
2,756,990 - -1.7
2,756,990 - -0.3
2,756,990 - -0.3
2,757,764 + A4249_RS13640 0.63 -1.3
2,757,766 + A4249_RS13640 0.63 -0.1
2,757,766 + A4249_RS13640 0.63 +2.4
2,757,766 + A4249_RS13640 0.63 +1.0
2,757,766 + A4249_RS13640 0.63 +0.0
2,757,766 + A4249_RS13640 0.63 +1.2
2,757,767 - A4249_RS13640 0.63 +0.7
2,757,767 - A4249_RS13640 0.63 -0.9
2,757,767 - A4249_RS13640 0.63 -0.2
2,757,767 - A4249_RS13640 0.63 +1.5
2,758,954 - -1.6
2,758,954 - -0.8
2,758,954 - +0.7
2,759,018 + -0.5
2,759,018 + +0.1
2,759,018 + +0.5
2,759,018 + +0.6
2,759,018 + -0.1
2,759,018 + +0.6
2,759,018 + -0.3
2,759,018 + +0.6
2,759,018 + +1.7
2,759,018 + -0.5
2,759,018 + -0.3
2,759,018 + +0.9
2,759,019 - +0.4
2,759,019 - +0.4
2,759,019 - -1.4
2,759,019 - -0.8
2,759,030 - -0.4
2,759,059 + -1.3
2,759,085 - -0.1
2,759,085 - -0.0

Or see this region's nucleotide sequence