Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13565 and A4249_RS13570 are separated by 6 nucleotides A4249_RS13570 and A4249_RS13575 overlap by 1 nucleotides A4249_RS13575 and A4249_RS13580 overlap by 4 nucleotides A4249_RS13580 and A4249_RS13585 are separated by 232 nucleotides
A4249_RS13565: A4249_RS13565 - carbon-nitrogen hydrolase family protein, at 2,741,243 to 2,742,082
_RS13565
A4249_RS13570: A4249_RS13570 - DUF1178 family protein, at 2,742,089 to 2,742,523
_RS13570
A4249_RS13575: A4249_RS13575 - GNAT family N-acetyltransferase, at 2,742,523 to 2,743,020
_RS13575
A4249_RS13580: A4249_RS13580 - UrcA family protein, at 2,743,017 to 2,743,322
_RS13580
A4249_RS13585: A4249_RS13585 - translational GTPase TypA, at 2,743,555 to 2,745,387
_RS13585
Position (kb)
2742
2743
2744 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2741.639 kb on + strand, within A4249_RS13565 at 2741.639 kb on + strand, within A4249_RS13565 at 2741.639 kb on + strand, within A4249_RS13565 at 2741.639 kb on + strand, within A4249_RS13565 at 2741.640 kb on - strand, within A4249_RS13565 at 2741.640 kb on - strand, within A4249_RS13565 at 2741.723 kb on + strand, within A4249_RS13565 at 2742.158 kb on + strand, within A4249_RS13570 at 2742.159 kb on - strand, within A4249_RS13570 at 2742.353 kb on + strand, within A4249_RS13570 at 2742.353 kb on + strand, within A4249_RS13570 at 2742.354 kb on - strand, within A4249_RS13570 at 2742.354 kb on - strand, within A4249_RS13570 at 2742.354 kb on - strand, within A4249_RS13570 at 2742.422 kb on + strand, within A4249_RS13570 at 2742.423 kb on - strand, within A4249_RS13570 at 2742.423 kb on - strand, within A4249_RS13570 at 2742.423 kb on - strand, within A4249_RS13570 at 2742.423 kb on - strand, within A4249_RS13570 at 2742.644 kb on - strand, within A4249_RS13575 at 2742.644 kb on - strand, within A4249_RS13575 at 2742.694 kb on + strand, within A4249_RS13575 at 2742.694 kb on + strand, within A4249_RS13575 at 2742.695 kb on - strand, within A4249_RS13575 at 2742.707 kb on - strand, within A4249_RS13575 at 2742.781 kb on + strand, within A4249_RS13575 at 2742.781 kb on + strand, within A4249_RS13575 at 2742.781 kb on + strand, within A4249_RS13575 at 2742.781 kb on + strand, within A4249_RS13575 at 2742.781 kb on + strand, within A4249_RS13575 at 2742.781 kb on + strand, within A4249_RS13575 at 2742.782 kb on - strand, within A4249_RS13575 at 2742.782 kb on - strand, within A4249_RS13575 at 2742.782 kb on - strand, within A4249_RS13575 at 2742.782 kb on - strand, within A4249_RS13575 at 2742.782 kb on - strand, within A4249_RS13575 at 2742.782 kb on - strand, within A4249_RS13575 at 2742.782 kb on - strand, within A4249_RS13575 at 2742.782 kb on - strand, within A4249_RS13575 at 2742.978 kb on + strand at 2742.979 kb on - strand at 2742.982 kb on + strand at 2742.982 kb on + strand at 2742.983 kb on - strand at 2742.983 kb on - strand at 2742.983 kb on - strand at 2742.983 kb on - strand at 2742.983 kb on - strand at 2743.000 kb on + strand at 2743.000 kb on + strand at 2743.000 kb on + strand at 2743.001 kb on - strand at 2743.001 kb on - strand at 2743.001 kb on - strand at 2743.001 kb on - strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.018 kb on + strand at 2743.018 kb on + strand at 2743.090 kb on + strand, within A4249_RS13580 at 2743.090 kb on + strand, within A4249_RS13580 at 2743.091 kb on - strand, within A4249_RS13580 at 2743.091 kb on - strand, within A4249_RS13580 at 2743.091 kb on - strand, within A4249_RS13580 at 2743.091 kb on - strand, within A4249_RS13580 at 2743.091 kb on - strand, within A4249_RS13580 at 2743.091 kb on - strand, within A4249_RS13580 at 2743.235 kb on + strand, within A4249_RS13580 at 2743.235 kb on + strand, within A4249_RS13580 at 2743.414 kb on - strand at 2743.475 kb on + strand at 2743.475 kb on + strand at 2743.475 kb on + strand at 2743.475 kb on + strand at 2743.475 kb on + strand at 2743.475 kb on + strand at 2743.476 kb on - strand at 2743.476 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 2,741,639 + A4249_RS13565 0.47 +0.4 2,741,639 + A4249_RS13565 0.47 +0.2 2,741,639 + A4249_RS13565 0.47 -0.2 2,741,639 + A4249_RS13565 0.47 -2.3 2,741,640 - A4249_RS13565 0.47 -0.5 2,741,640 - A4249_RS13565 0.47 -0.4 2,741,723 + A4249_RS13565 0.57 +0.7 2,742,158 + A4249_RS13570 0.16 +0.1 2,742,159 - A4249_RS13570 0.16 +0.1 2,742,353 + A4249_RS13570 0.61 -0.4 2,742,353 + A4249_RS13570 0.61 -0.2 2,742,354 - A4249_RS13570 0.61 +0.8 2,742,354 - A4249_RS13570 0.61 +0.2 2,742,354 - A4249_RS13570 0.61 +0.2 2,742,422 + A4249_RS13570 0.77 +1.2 2,742,423 - A4249_RS13570 0.77 -0.1 2,742,423 - A4249_RS13570 0.77 +0.2 2,742,423 - A4249_RS13570 0.77 +0.7 2,742,423 - A4249_RS13570 0.77 +1.6 2,742,644 - A4249_RS13575 0.24 -0.9 2,742,644 - A4249_RS13575 0.24 +0.1 2,742,694 + A4249_RS13575 0.34 +0.6 2,742,694 + A4249_RS13575 0.34 -0.3 2,742,695 - A4249_RS13575 0.35 -1.1 2,742,707 - A4249_RS13575 0.37 -0.4 2,742,781 + A4249_RS13575 0.52 -0.3 2,742,781 + A4249_RS13575 0.52 +2.0 2,742,781 + A4249_RS13575 0.52 -1.9 2,742,781 + A4249_RS13575 0.52 +0.0 2,742,781 + A4249_RS13575 0.52 -0.2 2,742,781 + A4249_RS13575 0.52 -0.6 2,742,782 - A4249_RS13575 0.52 -1.3 2,742,782 - A4249_RS13575 0.52 -0.3 2,742,782 - A4249_RS13575 0.52 -0.7 2,742,782 - A4249_RS13575 0.52 +0.7 2,742,782 - A4249_RS13575 0.52 -0.9 2,742,782 - A4249_RS13575 0.52 -0.8 2,742,782 - A4249_RS13575 0.52 -1.0 2,742,782 - A4249_RS13575 0.52 +0.3 2,742,978 + -0.3 2,742,979 - -0.1 2,742,982 + -0.2 2,742,982 + -1.0 2,742,983 - -0.6 2,742,983 - -0.5 2,742,983 - +0.2 2,742,983 - -0.1 2,742,983 - -0.6 2,743,000 + -0.1 2,743,000 + -0.4 2,743,000 + -0.4 2,743,001 - +0.6 2,743,001 - -0.5 2,743,001 - +0.5 2,743,001 - -0.7 2,743,002 + -1.2 2,743,002 + +0.7 2,743,002 + -0.3 2,743,002 + -0.0 2,743,002 + +1.0 2,743,002 + -0.9 2,743,002 + -0.9 2,743,002 + +1.0 2,743,002 + +0.0 2,743,002 + -1.9 2,743,003 - -0.1 2,743,003 - +0.2 2,743,003 - +0.4 2,743,003 - +0.1 2,743,003 - -0.2 2,743,003 - +1.0 2,743,003 - -0.6 2,743,003 - -0.2 2,743,003 - -1.1 2,743,003 - -0.5 2,743,018 + -1.1 2,743,018 + -1.2 2,743,090 + A4249_RS13580 0.24 -0.6 2,743,090 + A4249_RS13580 0.24 -0.3 2,743,091 - A4249_RS13580 0.24 +0.2 2,743,091 - A4249_RS13580 0.24 -0.3 2,743,091 - A4249_RS13580 0.24 -0.4 2,743,091 - A4249_RS13580 0.24 -0.6 2,743,091 - A4249_RS13580 0.24 +0.1 2,743,091 - A4249_RS13580 0.24 -1.1 2,743,235 + A4249_RS13580 0.71 -1.1 2,743,235 + A4249_RS13580 0.71 +0.5 2,743,414 - +0.4 2,743,475 + -0.1 2,743,475 + -0.1 2,743,475 + +0.1 2,743,475 + -0.3 2,743,475 + -0.8 2,743,475 + +0.3 2,743,476 - -0.6 2,743,476 - +0.9
Or see this region's nucleotide sequence