Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13255

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13245 and A4249_RS13250 are separated by 239 nucleotidesA4249_RS13250 and A4249_RS13255 are separated by 62 nucleotidesA4249_RS13255 and A4249_RS13260 are separated by 37 nucleotides A4249_RS13245: A4249_RS13245 - outer membrane beta-barrel protein, at 2,670,537 to 2,671,694 _RS13245 A4249_RS13250: A4249_RS13250 - MaoC family dehydratase, at 2,671,934 to 2,672,401 _RS13250 A4249_RS13255: A4249_RS13255 - threonine/serine dehydratase, at 2,672,464 to 2,673,444 _RS13255 A4249_RS13260: A4249_RS13260 - glycerol kinase GlpK, at 2,673,482 to 2,675,011 _RS13260 Position (kb) 2672 2673 2674Strain fitness (log2 ratio) -2 -1 0 1 2at 2671.695 kb on - strandat 2671.726 kb on - strandat 2671.728 kb on - strandat 2671.728 kb on - strandat 2671.728 kb on - strandat 2671.731 kb on - strandat 2671.751 kb on - strandat 2671.761 kb on + strandat 2671.761 kb on + strandat 2671.775 kb on + strandat 2671.775 kb on + strandat 2671.776 kb on - strandat 2671.776 kb on - strandat 2671.776 kb on - strandat 2671.778 kb on - strandat 2671.838 kb on + strandat 2671.838 kb on + strandat 2671.838 kb on + strandat 2671.839 kb on - strandat 2671.839 kb on - strandat 2671.869 kb on - strandat 2671.869 kb on - strandat 2671.869 kb on - strandat 2671.872 kb on + strandat 2671.872 kb on + strandat 2671.873 kb on - strandat 2671.919 kb on + strandat 2671.919 kb on + strandat 2671.919 kb on + strandat 2671.919 kb on + strandat 2671.919 kb on + strandat 2671.919 kb on + strandat 2671.919 kb on + strandat 2671.920 kb on - strandat 2671.920 kb on - strandat 2671.920 kb on - strandat 2671.920 kb on - strandat 2671.920 kb on - strandat 2671.920 kb on - strandat 2671.924 kb on + strandat 2671.924 kb on + strandat 2671.924 kb on + strandat 2671.924 kb on + strandat 2671.924 kb on + strandat 2671.924 kb on + strandat 2671.924 kb on + strandat 2671.925 kb on - strandat 2671.925 kb on - strandat 2671.925 kb on - strandat 2671.925 kb on - strandat 2671.925 kb on - strandat 2671.925 kb on - strandat 2671.925 kb on - strandat 2671.925 kb on - strandat 2672.069 kb on + strand, within A4249_RS13250at 2672.142 kb on + strand, within A4249_RS13250at 2672.142 kb on + strand, within A4249_RS13250at 2672.142 kb on + strand, within A4249_RS13250at 2672.143 kb on - strand, within A4249_RS13250at 2672.143 kb on - strand, within A4249_RS13250at 2672.187 kb on + strand, within A4249_RS13250at 2672.187 kb on + strand, within A4249_RS13250at 2672.187 kb on + strand, within A4249_RS13250at 2672.188 kb on - strand, within A4249_RS13250at 2672.188 kb on - strand, within A4249_RS13250at 2672.188 kb on - strand, within A4249_RS13250at 2672.188 kb on - strand, within A4249_RS13250at 2672.188 kb on - strand, within A4249_RS13250at 2672.188 kb on - strand, within A4249_RS13250at 2672.188 kb on - strand, within A4249_RS13250at 2672.188 kb on - strand, within A4249_RS13250at 2672.188 kb on - strand, within A4249_RS13250at 2672.498 kb on + strandat 2672.499 kb on - strandat 2672.499 kb on - strandat 2672.499 kb on - strandat 2673.074 kb on + strand, within A4249_RS13255at 2673.074 kb on + strand, within A4249_RS13255at 2673.075 kb on - strand, within A4249_RS13255at 2673.075 kb on - strand, within A4249_RS13255at 2673.075 kb on - strand, within A4249_RS13255at 2673.266 kb on + strand, within A4249_RS13255at 2673.266 kb on + strand, within A4249_RS13255at 2673.266 kb on + strand, within A4249_RS13255at 2673.266 kb on + strand, within A4249_RS13255at 2673.266 kb on + strand, within A4249_RS13255at 2673.266 kb on + strand, within A4249_RS13255at 2673.266 kb on + strand, within A4249_RS13255at 2673.267 kb on - strand, within A4249_RS13255at 2673.267 kb on - strand, within A4249_RS13255at 2673.267 kb on - strand, within A4249_RS13255at 2673.267 kb on - strand, within A4249_RS13255at 2673.267 kb on - strand, within A4249_RS13255at 2673.267 kb on - strand, within A4249_RS13255at 2673.321 kb on + strand, within A4249_RS13255at 2673.322 kb on - strand, within A4249_RS13255at 2673.322 kb on - strand, within A4249_RS13255at 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.423 kb on - strandat 2673.423 kb on - strandat 2673.423 kb on - strandat 2673.423 kb on - strandat 2673.423 kb on - strandat 2673.423 kb on - strandat 2673.423 kb on - strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.918 kb on - strand, within A4249_RS13260at 2673.918 kb on - strand, within A4249_RS13260at 2674.304 kb on + strand, within A4249_RS13260at 2674.304 kb on + strand, within A4249_RS13260at 2674.304 kb on + strand, within A4249_RS13260at 2674.304 kb on + strand, within A4249_RS13260at 2674.304 kb on + strand, within A4249_RS13260at 2674.305 kb on - strand, within A4249_RS13260at 2674.305 kb on - strand, within A4249_RS13260at 2674.409 kb on + strand, within A4249_RS13260

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,671,695 - +1.8
2,671,726 - +0.0
2,671,728 - +0.5
2,671,728 - -0.5
2,671,728 - +0.8
2,671,731 - +1.8
2,671,751 - +0.7
2,671,761 + -0.7
2,671,761 + +0.2
2,671,775 + +1.2
2,671,775 + +0.2
2,671,776 - +0.5
2,671,776 - -0.2
2,671,776 - +0.0
2,671,778 - +0.2
2,671,838 + -1.0
2,671,838 + -0.5
2,671,838 + -0.2
2,671,839 - -0.6
2,671,839 - -1.0
2,671,869 - -1.1
2,671,869 - -0.5
2,671,869 - -1.8
2,671,872 + -0.4
2,671,872 + -0.8
2,671,873 - -0.9
2,671,919 + +0.2
2,671,919 + -0.0
2,671,919 + -0.2
2,671,919 + +0.6
2,671,919 + -0.3
2,671,919 + +0.8
2,671,919 + -2.5
2,671,920 - -1.7
2,671,920 - -0.6
2,671,920 - -0.3
2,671,920 - -1.2
2,671,920 - -0.5
2,671,920 - -0.2
2,671,924 + -0.1
2,671,924 + -1.3
2,671,924 + -0.9
2,671,924 + -1.7
2,671,924 + +0.6
2,671,924 + -0.9
2,671,924 + -0.4
2,671,925 - +0.6
2,671,925 - +1.1
2,671,925 - -0.2
2,671,925 - -0.2
2,671,925 - -0.4
2,671,925 - +0.7
2,671,925 - -0.4
2,671,925 - -0.7
2,672,069 + A4249_RS13250 0.29 -1.5
2,672,142 + A4249_RS13250 0.44 +0.5
2,672,142 + A4249_RS13250 0.44 -0.1
2,672,142 + A4249_RS13250 0.44 +0.9
2,672,143 - A4249_RS13250 0.45 -0.5
2,672,143 - A4249_RS13250 0.45 -1.8
2,672,187 + A4249_RS13250 0.54 -0.6
2,672,187 + A4249_RS13250 0.54 +0.3
2,672,187 + A4249_RS13250 0.54 -1.8
2,672,188 - A4249_RS13250 0.54 +0.7
2,672,188 - A4249_RS13250 0.54 -0.6
2,672,188 - A4249_RS13250 0.54 +0.5
2,672,188 - A4249_RS13250 0.54 +0.5
2,672,188 - A4249_RS13250 0.54 +0.3
2,672,188 - A4249_RS13250 0.54 -0.1
2,672,188 - A4249_RS13250 0.54 +0.9
2,672,188 - A4249_RS13250 0.54 -0.1
2,672,188 - A4249_RS13250 0.54 +0.5
2,672,498 + +0.3
2,672,499 - -0.5
2,672,499 - +0.4
2,672,499 - -0.6
2,673,074 + A4249_RS13255 0.62 +0.2
2,673,074 + A4249_RS13255 0.62 -0.5
2,673,075 - A4249_RS13255 0.62 -0.3
2,673,075 - A4249_RS13255 0.62 +1.0
2,673,075 - A4249_RS13255 0.62 -0.2
2,673,266 + A4249_RS13255 0.82 -1.9
2,673,266 + A4249_RS13255 0.82 +0.1
2,673,266 + A4249_RS13255 0.82 -0.5
2,673,266 + A4249_RS13255 0.82 -0.4
2,673,266 + A4249_RS13255 0.82 -0.5
2,673,266 + A4249_RS13255 0.82 -0.5
2,673,266 + A4249_RS13255 0.82 +2.1
2,673,267 - A4249_RS13255 0.82 +0.4
2,673,267 - A4249_RS13255 0.82 -1.7
2,673,267 - A4249_RS13255 0.82 +0.8
2,673,267 - A4249_RS13255 0.82 -0.2
2,673,267 - A4249_RS13255 0.82 -0.4
2,673,267 - A4249_RS13255 0.82 -0.1
2,673,321 + A4249_RS13255 0.87 -1.4
2,673,322 - A4249_RS13255 0.87 -0.3
2,673,322 - A4249_RS13255 0.87 +1.0
2,673,422 + -0.7
2,673,422 + -0.5
2,673,422 + -0.0
2,673,422 + -1.1
2,673,422 + +1.2
2,673,422 + -1.1
2,673,422 + -2.3
2,673,422 + +0.4
2,673,422 + -0.2
2,673,422 + -0.1
2,673,423 - +1.0
2,673,423 - +0.3
2,673,423 - -0.6
2,673,423 - -1.0
2,673,423 - +0.1
2,673,423 - -1.3
2,673,423 - +0.3
2,673,444 + -0.4
2,673,444 + -0.7
2,673,444 + +0.4
2,673,444 + -0.6
2,673,444 + -0.4
2,673,444 + +0.6
2,673,444 + -0.5
2,673,444 + +0.5
2,673,444 + -1.7
2,673,444 + -0.4
2,673,444 + -1.0
2,673,444 + +0.1
2,673,444 + -1.0
2,673,444 + -0.2
2,673,444 + -0.4
2,673,445 - -0.9
2,673,445 - -0.1
2,673,445 - -0.2
2,673,445 - +0.3
2,673,445 - -0.6
2,673,445 - -0.6
2,673,445 - +0.8
2,673,445 - +0.4
2,673,445 - -0.7
2,673,445 - -1.5
2,673,918 - A4249_RS13260 0.28 -0.7
2,673,918 - A4249_RS13260 0.28 +1.6
2,674,304 + A4249_RS13260 0.54 -0.9
2,674,304 + A4249_RS13260 0.54 +1.2
2,674,304 + A4249_RS13260 0.54 -0.3
2,674,304 + A4249_RS13260 0.54 +0.3
2,674,304 + A4249_RS13260 0.54 +0.1
2,674,305 - A4249_RS13260 0.54 +0.0
2,674,305 - A4249_RS13260 0.54 +0.8
2,674,409 + A4249_RS13260 0.61 -0.3

Or see this region's nucleotide sequence