Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13175 and A4249_RS13180 are separated by 7 nucleotides A4249_RS13180 and A4249_RS13185 are separated by 0 nucleotides A4249_RS13185 and A4249_RS13190 are separated by 462 nucleotides
A4249_RS13175: A4249_RS13175 - Rrf2 family transcriptional regulator, at 2,654,073 to 2,654,543
_RS13175
A4249_RS13180: A4249_RS13180 - SDR family oxidoreductase, at 2,654,551 to 2,655,348
_RS13180
A4249_RS13185: A4249_RS13185 - dihydrolipoyl dehydrogenase, at 2,655,349 to 2,656,746
_RS13185
A4249_RS13190: A4249_RS13190 - 2-oxo acid dehydrogenase subunit E2, at 2,657,209 to 2,658,864
_RS13190
Position (kb)
2655
2656
2657 Strain fitness (log2 ratio)
-2
-1
0
1 at 2654.393 kb on + strand, within A4249_RS13175 at 2654.610 kb on + strand at 2654.610 kb on + strand at 2654.610 kb on + strand at 2654.610 kb on + strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.614 kb on + strand at 2654.614 kb on + strand at 2654.614 kb on + strand at 2654.614 kb on + strand at 2654.614 kb on + strand at 2654.615 kb on - strand at 2654.615 kb on - strand at 2654.615 kb on - strand at 2654.615 kb on - strand at 2654.615 kb on - strand at 2654.615 kb on - strand at 2654.615 kb on - strand at 2655.008 kb on - strand, within A4249_RS13180 at 2655.208 kb on + strand, within A4249_RS13180 at 2655.209 kb on - strand, within A4249_RS13180 at 2655.209 kb on - strand, within A4249_RS13180 at 2655.786 kb on + strand, within A4249_RS13185 at 2655.786 kb on + strand, within A4249_RS13185 at 2655.787 kb on - strand, within A4249_RS13185 at 2656.005 kb on + strand, within A4249_RS13185 at 2656.005 kb on + strand, within A4249_RS13185 at 2656.100 kb on + strand, within A4249_RS13185 at 2656.113 kb on + strand, within A4249_RS13185 at 2656.113 kb on + strand, within A4249_RS13185 at 2656.114 kb on - strand, within A4249_RS13185 at 2656.188 kb on - strand, within A4249_RS13185 at 2656.188 kb on - strand, within A4249_RS13185 at 2656.453 kb on - strand, within A4249_RS13185 at 2656.691 kb on + strand at 2656.691 kb on + strand at 2656.857 kb on + strand at 2656.857 kb on + strand at 2656.857 kb on + strand at 2656.922 kb on + strand at 2656.922 kb on + strand at 2656.922 kb on + strand at 2656.922 kb on + strand at 2656.922 kb on + strand at 2656.923 kb on - strand at 2656.923 kb on - strand at 2656.923 kb on - strand at 2656.923 kb on - strand at 2656.923 kb on - strand at 2656.923 kb on - strand at 2656.923 kb on - strand at 2656.923 kb on - strand at 2656.923 kb on - strand at 2656.923 kb on - strand at 2656.923 kb on - strand at 2656.923 kb on - strand at 2656.932 kb on + strand at 2656.932 kb on + strand at 2656.932 kb on + strand at 2656.932 kb on + strand at 2656.933 kb on - strand at 2656.933 kb on - strand at 2656.933 kb on - strand at 2656.933 kb on - strand at 2656.933 kb on - strand at 2656.933 kb on - strand at 2656.933 kb on - strand at 2656.969 kb on - strand at 2657.041 kb on - strand at 2657.119 kb on + strand at 2657.119 kb on + strand at 2657.119 kb on + strand at 2657.119 kb on + strand at 2657.120 kb on - strand at 2657.120 kb on - strand at 2657.120 kb on - strand at 2657.120 kb on - strand at 2657.120 kb on - strand at 2657.120 kb on - strand at 2657.120 kb on - strand at 2657.204 kb on + strand at 2657.204 kb on + strand at 2657.204 kb on + strand at 2657.204 kb on + strand at 2657.204 kb on + strand at 2657.204 kb on + strand at 2657.205 kb on - strand at 2657.205 kb on - strand at 2657.205 kb on - strand at 2657.205 kb on - strand at 2657.206 kb on + strand at 2657.206 kb on + strand at 2657.206 kb on + strand at 2657.206 kb on + strand at 2657.206 kb on + strand at 2657.206 kb on + strand at 2657.206 kb on + strand at 2657.207 kb on - strand at 2657.207 kb on - strand at 2657.207 kb on - strand at 2657.207 kb on - strand at 2657.207 kb on - strand at 2657.207 kb on - strand at 2657.207 kb on - strand at 2657.207 kb on - strand at 2657.207 kb on - strand at 2657.207 kb on - strand at 2657.207 kb on - strand at 2657.207 kb on - strand at 2657.207 kb on - strand at 2657.207 kb on - strand at 2657.207 kb on - strand at 2657.207 kb on - strand at 2657.207 kb on - strand at 2657.547 kb on - strand, within A4249_RS13190
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 2,654,393 + A4249_RS13175 0.68 +1.1 2,654,610 + +1.3 2,654,610 + -0.1 2,654,610 + -0.3 2,654,610 + -0.1 2,654,611 - -1.7 2,654,611 - +0.0 2,654,611 - +0.3 2,654,611 - +0.0 2,654,611 - -1.0 2,654,611 - -1.0 2,654,611 - +0.1 2,654,611 - -0.3 2,654,611 - +0.6 2,654,614 + -0.1 2,654,614 + -0.8 2,654,614 + +0.5 2,654,614 + -0.4 2,654,614 + +0.6 2,654,615 - -0.6 2,654,615 - -1.1 2,654,615 - +1.0 2,654,615 - -0.4 2,654,615 - -0.6 2,654,615 - -1.7 2,654,615 - -0.7 2,655,008 - A4249_RS13180 0.57 +0.0 2,655,208 + A4249_RS13180 0.82 -0.1 2,655,209 - A4249_RS13180 0.82 +0.6 2,655,209 - A4249_RS13180 0.82 -2.0 2,655,786 + A4249_RS13185 0.31 -0.2 2,655,786 + A4249_RS13185 0.31 -0.6 2,655,787 - A4249_RS13185 0.31 +1.2 2,656,005 + A4249_RS13185 0.47 +0.4 2,656,005 + A4249_RS13185 0.47 +1.1 2,656,100 + A4249_RS13185 0.54 +0.2 2,656,113 + A4249_RS13185 0.55 -0.2 2,656,113 + A4249_RS13185 0.55 -0.6 2,656,114 - A4249_RS13185 0.55 +1.2 2,656,188 - A4249_RS13185 0.60 +0.6 2,656,188 - A4249_RS13185 0.60 +0.2 2,656,453 - A4249_RS13185 0.79 +0.7 2,656,691 + -0.1 2,656,691 + -0.4 2,656,857 + +0.4 2,656,857 + -1.4 2,656,857 + -0.1 2,656,922 + -0.1 2,656,922 + -0.4 2,656,922 + -0.3 2,656,922 + +0.5 2,656,922 + -1.0 2,656,923 - +0.6 2,656,923 - -0.1 2,656,923 - -1.3 2,656,923 - +0.6 2,656,923 - -0.8 2,656,923 - -0.1 2,656,923 - -0.7 2,656,923 - -0.1 2,656,923 - +0.4 2,656,923 - +0.2 2,656,923 - -0.6 2,656,923 - -0.5 2,656,932 + -0.1 2,656,932 + -1.4 2,656,932 + +0.3 2,656,932 + +0.4 2,656,933 - +0.4 2,656,933 - +0.3 2,656,933 - -1.4 2,656,933 - -0.6 2,656,933 - -1.2 2,656,933 - -0.3 2,656,933 - -0.1 2,656,969 - -1.1 2,657,041 - -0.2 2,657,119 + -0.5 2,657,119 + -1.0 2,657,119 + +0.1 2,657,119 + +0.2 2,657,120 - +0.2 2,657,120 - +1.1 2,657,120 - +0.6 2,657,120 - +0.1 2,657,120 - -0.2 2,657,120 - -0.7 2,657,120 - -0.1 2,657,204 + -0.3 2,657,204 + +0.3 2,657,204 + -0.9 2,657,204 + +0.8 2,657,204 + -0.3 2,657,204 + +1.3 2,657,205 - +1.6 2,657,205 - +0.5 2,657,205 - +0.0 2,657,205 - -1.8 2,657,206 + +0.4 2,657,206 + +0.9 2,657,206 + -1.6 2,657,206 + -0.5 2,657,206 + -0.2 2,657,206 + +0.4 2,657,206 + -0.2 2,657,207 - +0.0 2,657,207 - +1.6 2,657,207 - -0.2 2,657,207 - -0.5 2,657,207 - -0.3 2,657,207 - +0.4 2,657,207 - -0.6 2,657,207 - -0.4 2,657,207 - +0.1 2,657,207 - +0.3 2,657,207 - +0.1 2,657,207 - -0.4 2,657,207 - +0.4 2,657,207 - +0.4 2,657,207 - +0.4 2,657,207 - +0.1 2,657,207 - -0.0 2,657,547 - A4249_RS13190 0.20 -1.0
Or see this region's nucleotide sequence