Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS12845

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS12840 and A4249_RS12845 overlap by 4 nucleotidesA4249_RS12845 and A4249_RS12850 are separated by 247 nucleotides A4249_RS12840: A4249_RS12840 - isoaspartyl peptidase/L-asparaginase, at 2,574,884 to 2,575,753 _RS12840 A4249_RS12845: A4249_RS12845 - ATP-binding protein, at 2,575,750 to 2,577,471 _RS12845 A4249_RS12850: A4249_RS12850 - pitrilysin family protein, at 2,577,719 to 2,580,583 _RS12850 Position (kb) 2575 2576 2577 2578Strain fitness (log2 ratio) -2 -1 0 1 2at 2574.827 kb on + strandat 2574.827 kb on + strandat 2574.935 kb on + strandat 2574.935 kb on + strandat 2574.935 kb on + strandat 2574.935 kb on + strandat 2574.935 kb on + strandat 2574.936 kb on - strandat 2574.936 kb on - strandat 2574.936 kb on - strandat 2574.955 kb on + strandat 2574.955 kb on + strandat 2574.955 kb on + strandat 2574.955 kb on + strandat 2574.955 kb on + strandat 2574.955 kb on + strandat 2574.955 kb on + strandat 2574.956 kb on - strandat 2574.956 kb on - strandat 2574.956 kb on - strandat 2574.956 kb on - strandat 2574.956 kb on - strandat 2575.058 kb on + strand, within A4249_RS12840at 2575.058 kb on + strand, within A4249_RS12840at 2575.058 kb on + strand, within A4249_RS12840at 2575.059 kb on - strand, within A4249_RS12840at 2575.059 kb on - strand, within A4249_RS12840at 2575.100 kb on + strand, within A4249_RS12840at 2575.100 kb on + strand, within A4249_RS12840at 2575.219 kb on + strand, within A4249_RS12840at 2575.219 kb on + strand, within A4249_RS12840at 2575.219 kb on + strand, within A4249_RS12840at 2575.219 kb on + strand, within A4249_RS12840at 2575.219 kb on + strand, within A4249_RS12840at 2575.219 kb on + strand, within A4249_RS12840at 2575.219 kb on + strand, within A4249_RS12840at 2575.220 kb on - strand, within A4249_RS12840at 2575.220 kb on - strand, within A4249_RS12840at 2575.220 kb on - strand, within A4249_RS12840at 2575.220 kb on - strand, within A4249_RS12840at 2575.220 kb on - strand, within A4249_RS12840at 2575.220 kb on - strand, within A4249_RS12840at 2575.487 kb on + strand, within A4249_RS12840at 2575.487 kb on + strand, within A4249_RS12840at 2575.488 kb on - strand, within A4249_RS12840at 2575.520 kb on + strand, within A4249_RS12840at 2575.520 kb on + strand, within A4249_RS12840at 2575.520 kb on + strand, within A4249_RS12840at 2575.521 kb on - strand, within A4249_RS12840at 2575.521 kb on - strand, within A4249_RS12840at 2575.751 kb on + strandat 2575.751 kb on + strandat 2575.751 kb on + strandat 2575.752 kb on - strandat 2575.752 kb on - strandat 2575.752 kb on - strandat 2575.752 kb on - strandat 2575.752 kb on - strandat 2575.798 kb on + strandat 2575.798 kb on + strandat 2575.798 kb on + strandat 2575.798 kb on + strandat 2575.798 kb on + strandat 2575.798 kb on + strandat 2575.798 kb on + strandat 2575.798 kb on + strandat 2575.799 kb on - strandat 2575.799 kb on - strandat 2575.799 kb on - strandat 2575.799 kb on - strandat 2575.844 kb on + strandat 2575.844 kb on + strandat 2575.844 kb on + strandat 2575.844 kb on + strandat 2575.844 kb on + strandat 2575.845 kb on - strandat 2575.845 kb on - strandat 2575.845 kb on - strandat 2575.845 kb on - strandat 2575.845 kb on - strandat 2575.845 kb on - strandat 2575.845 kb on - strandat 2576.346 kb on + strand, within A4249_RS12845at 2576.347 kb on - strand, within A4249_RS12845at 2576.375 kb on - strand, within A4249_RS12845at 2576.476 kb on + strand, within A4249_RS12845at 2576.823 kb on + strand, within A4249_RS12845at 2576.823 kb on + strand, within A4249_RS12845at 2576.824 kb on - strand, within A4249_RS12845at 2576.824 kb on - strand, within A4249_RS12845at 2576.824 kb on - strand, within A4249_RS12845at 2576.824 kb on - strand, within A4249_RS12845at 2576.824 kb on - strand, within A4249_RS12845at 2577.077 kb on + strand, within A4249_RS12845at 2577.077 kb on + strand, within A4249_RS12845at 2577.077 kb on + strand, within A4249_RS12845at 2577.077 kb on + strand, within A4249_RS12845at 2577.077 kb on + strand, within A4249_RS12845at 2577.078 kb on - strand, within A4249_RS12845at 2577.078 kb on - strand, within A4249_RS12845at 2577.078 kb on - strand, within A4249_RS12845at 2577.078 kb on - strand, within A4249_RS12845at 2577.280 kb on + strand, within A4249_RS12845at 2577.281 kb on - strand, within A4249_RS12845at 2577.281 kb on - strand, within A4249_RS12845at 2577.327 kb on - strandat 2577.327 kb on - strandat 2577.447 kb on - strandat 2577.471 kb on + strandat 2577.471 kb on + strandat 2577.471 kb on + strandat 2577.472 kb on - strandat 2577.580 kb on - strandat 2577.580 kb on - strandat 2577.580 kb on - strandat 2577.589 kb on + strandat 2577.631 kb on - strandat 2577.642 kb on + strandat 2577.642 kb on + strandat 2577.642 kb on + strandat 2577.643 kb on - strandat 2577.679 kb on - strandat 2577.679 kb on - strandat 2577.905 kb on + strandat 2577.905 kb on + strandat 2577.905 kb on + strandat 2577.906 kb on - strandat 2577.953 kb on + strandat 2577.953 kb on + strandat 2577.954 kb on - strandat 2577.954 kb on - strandat 2577.954 kb on - strandat 2577.954 kb on - strandat 2577.954 kb on - strandat 2578.121 kb on + strand, within A4249_RS12850at 2578.244 kb on + strand, within A4249_RS12850at 2578.245 kb on - strand, within A4249_RS12850at 2578.245 kb on - strand, within A4249_RS12850at 2578.271 kb on + strand, within A4249_RS12850at 2578.310 kb on + strand, within A4249_RS12850at 2578.310 kb on + strand, within A4249_RS12850at 2578.310 kb on + strand, within A4249_RS12850at 2578.310 kb on + strand, within A4249_RS12850at 2578.311 kb on - strand, within A4249_RS12850at 2578.311 kb on - strand, within A4249_RS12850at 2578.311 kb on - strand, within A4249_RS12850at 2578.311 kb on - strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.403 kb on + strand, within A4249_RS12850at 2578.404 kb on - strand, within A4249_RS12850at 2578.404 kb on - strand, within A4249_RS12850at 2578.404 kb on - strand, within A4249_RS12850at 2578.404 kb on - strand, within A4249_RS12850at 2578.404 kb on - strand, within A4249_RS12850at 2578.404 kb on - strand, within A4249_RS12850at 2578.404 kb on - strand, within A4249_RS12850at 2578.404 kb on - strand, within A4249_RS12850at 2578.404 kb on - strand, within A4249_RS12850at 2578.404 kb on - strand, within A4249_RS12850at 2578.424 kb on + strand, within A4249_RS12850at 2578.424 kb on + strand, within A4249_RS12850at 2578.425 kb on - strand, within A4249_RS12850at 2578.425 kb on - strand, within A4249_RS12850at 2578.425 kb on - strand, within A4249_RS12850at 2578.425 kb on - strand, within A4249_RS12850at 2578.425 kb on - strand, within A4249_RS12850at 2578.425 kb on - strand, within A4249_RS12850at 2578.429 kb on + strand, within A4249_RS12850at 2578.429 kb on + strand, within A4249_RS12850at 2578.430 kb on - strand, within A4249_RS12850

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,574,827 + -2.2
2,574,827 + +0.4
2,574,935 + +0.7
2,574,935 + -0.0
2,574,935 + +0.2
2,574,935 + -1.4
2,574,935 + +1.1
2,574,936 - -0.0
2,574,936 - -1.1
2,574,936 - +0.8
2,574,955 + +0.9
2,574,955 + +0.2
2,574,955 + -0.6
2,574,955 + +0.3
2,574,955 + -0.1
2,574,955 + -0.9
2,574,955 + +0.5
2,574,956 - -0.6
2,574,956 - -0.9
2,574,956 - -0.1
2,574,956 - -0.2
2,574,956 - +0.6
2,575,058 + A4249_RS12840 0.20 -0.3
2,575,058 + A4249_RS12840 0.20 -0.4
2,575,058 + A4249_RS12840 0.20 -1.0
2,575,059 - A4249_RS12840 0.20 -0.8
2,575,059 - A4249_RS12840 0.20 -0.5
2,575,100 + A4249_RS12840 0.25 +0.4
2,575,100 + A4249_RS12840 0.25 -0.2
2,575,219 + A4249_RS12840 0.39 +0.1
2,575,219 + A4249_RS12840 0.39 -0.6
2,575,219 + A4249_RS12840 0.39 -0.3
2,575,219 + A4249_RS12840 0.39 +0.0
2,575,219 + A4249_RS12840 0.39 +0.4
2,575,219 + A4249_RS12840 0.39 -0.7
2,575,219 + A4249_RS12840 0.39 +0.2
2,575,220 - A4249_RS12840 0.39 -0.1
2,575,220 - A4249_RS12840 0.39 -0.0
2,575,220 - A4249_RS12840 0.39 +0.1
2,575,220 - A4249_RS12840 0.39 -1.2
2,575,220 - A4249_RS12840 0.39 -0.5
2,575,220 - A4249_RS12840 0.39 +1.4
2,575,487 + A4249_RS12840 0.69 +0.8
2,575,487 + A4249_RS12840 0.69 -0.8
2,575,488 - A4249_RS12840 0.69 +0.3
2,575,520 + A4249_RS12840 0.73 -0.2
2,575,520 + A4249_RS12840 0.73 -0.0
2,575,520 + A4249_RS12840 0.73 -1.3
2,575,521 - A4249_RS12840 0.73 -0.3
2,575,521 - A4249_RS12840 0.73 -1.4
2,575,751 + -0.3
2,575,751 + -1.1
2,575,751 + +1.2
2,575,752 - -0.3
2,575,752 - +0.1
2,575,752 - -1.0
2,575,752 - -0.5
2,575,752 - -0.4
2,575,798 + +1.4
2,575,798 + +1.4
2,575,798 + -1.0
2,575,798 + +0.4
2,575,798 + -0.6
2,575,798 + +0.5
2,575,798 + +0.5
2,575,798 + -0.2
2,575,799 - -0.8
2,575,799 - +0.0
2,575,799 - -1.3
2,575,799 - -0.3
2,575,844 + +1.2
2,575,844 + -1.1
2,575,844 + +0.9
2,575,844 + +0.9
2,575,844 + +0.9
2,575,845 - -0.1
2,575,845 - -1.1
2,575,845 - -1.7
2,575,845 - -1.4
2,575,845 - -0.2
2,575,845 - +0.3
2,575,845 - -1.2
2,576,346 + A4249_RS12845 0.35 +0.9
2,576,347 - A4249_RS12845 0.35 +0.3
2,576,375 - A4249_RS12845 0.36 -1.2
2,576,476 + A4249_RS12845 0.42 +0.2
2,576,823 + A4249_RS12845 0.62 -0.6
2,576,823 + A4249_RS12845 0.62 +0.3
2,576,824 - A4249_RS12845 0.62 -0.1
2,576,824 - A4249_RS12845 0.62 +0.2
2,576,824 - A4249_RS12845 0.62 -1.1
2,576,824 - A4249_RS12845 0.62 -0.1
2,576,824 - A4249_RS12845 0.62 +0.5
2,577,077 + A4249_RS12845 0.77 -2.7
2,577,077 + A4249_RS12845 0.77 -0.2
2,577,077 + A4249_RS12845 0.77 -0.4
2,577,077 + A4249_RS12845 0.77 -0.2
2,577,077 + A4249_RS12845 0.77 +0.2
2,577,078 - A4249_RS12845 0.77 -0.7
2,577,078 - A4249_RS12845 0.77 +1.4
2,577,078 - A4249_RS12845 0.77 -0.1
2,577,078 - A4249_RS12845 0.77 +0.2
2,577,280 + A4249_RS12845 0.89 -1.7
2,577,281 - A4249_RS12845 0.89 +0.9
2,577,281 - A4249_RS12845 0.89 +0.2
2,577,327 - +0.2
2,577,327 - -0.9
2,577,447 - +0.2
2,577,471 + +0.4
2,577,471 + +0.9
2,577,471 + -0.1
2,577,472 - +1.3
2,577,580 - +0.3
2,577,580 - +0.7
2,577,580 - +0.4
2,577,589 + -0.6
2,577,631 - -0.5
2,577,642 + +0.9
2,577,642 + -1.3
2,577,642 + +1.8
2,577,643 - +0.7
2,577,679 - +0.1
2,577,679 - -0.0
2,577,905 + -0.1
2,577,905 + -0.6
2,577,905 + +0.0
2,577,906 - -0.3
2,577,953 + +0.6
2,577,953 + -0.5
2,577,954 - -0.3
2,577,954 - -0.8
2,577,954 - +0.4
2,577,954 - +0.8
2,577,954 - -0.6
2,578,121 + A4249_RS12850 0.14 -0.2
2,578,244 + A4249_RS12850 0.18 -0.7
2,578,245 - A4249_RS12850 0.18 -0.4
2,578,245 - A4249_RS12850 0.18 +1.9
2,578,271 + A4249_RS12850 0.19 +0.0
2,578,310 + A4249_RS12850 0.21 -0.6
2,578,310 + A4249_RS12850 0.21 -0.2
2,578,310 + A4249_RS12850 0.21 -1.3
2,578,310 + A4249_RS12850 0.21 -1.1
2,578,311 - A4249_RS12850 0.21 +0.4
2,578,311 - A4249_RS12850 0.21 -0.6
2,578,311 - A4249_RS12850 0.21 -1.1
2,578,311 - A4249_RS12850 0.21 +1.5
2,578,403 + A4249_RS12850 0.24 +1.4
2,578,403 + A4249_RS12850 0.24 +0.7
2,578,403 + A4249_RS12850 0.24 -0.7
2,578,403 + A4249_RS12850 0.24 -1.1
2,578,403 + A4249_RS12850 0.24 +0.8
2,578,403 + A4249_RS12850 0.24 +0.0
2,578,403 + A4249_RS12850 0.24 -0.2
2,578,403 + A4249_RS12850 0.24 +1.3
2,578,403 + A4249_RS12850 0.24 -1.7
2,578,403 + A4249_RS12850 0.24 +0.2
2,578,403 + A4249_RS12850 0.24 -1.3
2,578,403 + A4249_RS12850 0.24 -0.6
2,578,403 + A4249_RS12850 0.24 +0.8
2,578,403 + A4249_RS12850 0.24 +0.9
2,578,403 + A4249_RS12850 0.24 +0.2
2,578,403 + A4249_RS12850 0.24 +1.7
2,578,403 + A4249_RS12850 0.24 -0.4
2,578,403 + A4249_RS12850 0.24 -0.5
2,578,403 + A4249_RS12850 0.24 +0.7
2,578,404 - A4249_RS12850 0.24 -0.2
2,578,404 - A4249_RS12850 0.24 +0.4
2,578,404 - A4249_RS12850 0.24 +0.0
2,578,404 - A4249_RS12850 0.24 -0.1
2,578,404 - A4249_RS12850 0.24 +0.8
2,578,404 - A4249_RS12850 0.24 -0.1
2,578,404 - A4249_RS12850 0.24 -0.6
2,578,404 - A4249_RS12850 0.24 +0.5
2,578,404 - A4249_RS12850 0.24 -1.0
2,578,404 - A4249_RS12850 0.24 -0.4
2,578,424 + A4249_RS12850 0.25 +0.2
2,578,424 + A4249_RS12850 0.25 +0.4
2,578,425 - A4249_RS12850 0.25 +0.4
2,578,425 - A4249_RS12850 0.25 -0.2
2,578,425 - A4249_RS12850 0.25 +0.3
2,578,425 - A4249_RS12850 0.25 -0.5
2,578,425 - A4249_RS12850 0.25 +0.4
2,578,425 - A4249_RS12850 0.25 +0.0
2,578,429 + A4249_RS12850 0.25 -0.5
2,578,429 + A4249_RS12850 0.25 -0.1
2,578,430 - A4249_RS12850 0.25 +0.7

Or see this region's nucleotide sequence