Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12460 and A4249_RS12465 are separated by 188 nucleotides A4249_RS12465 and A4249_RS12470 are separated by 71 nucleotides A4249_RS12470 and A4249_RS12475 are separated by 75 nucleotides A4249_RS12475 and A4249_RS12480 are separated by 4 nucleotides
A4249_RS12460: A4249_RS12460 - GlsB/YeaQ/YmgE family stress response membrane protein, at 2,499,342 to 2,499,596
_RS12460
A4249_RS12465: A4249_RS12465 - helix-turn-helix transcriptional regulator, at 2,499,785 to 2,500,165
_RS12465
A4249_RS12470: A4249_RS12470 - histidinol-phosphatase, at 2,500,237 to 2,501,022
_RS12470
A4249_RS12475: A4249_RS12475 - hypothetical protein, at 2,501,098 to 2,501,667
_RS12475
A4249_RS12480: A4249_RS12480 - alpha/beta hydrolase, at 2,501,672 to 2,502,706
_RS12480
Position (kb)
2500
2501
2502 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2499.305 kb on + strand at 2499.305 kb on + strand at 2499.305 kb on + strand at 2499.306 kb on - strand at 2499.324 kb on + strand at 2499.325 kb on - strand at 2499.393 kb on + strand, within A4249_RS12460 at 2499.394 kb on - strand, within A4249_RS12460 at 2499.652 kb on + strand at 2499.685 kb on + strand at 2499.686 kb on - strand at 2499.686 kb on - strand at 2499.686 kb on - strand at 2499.906 kb on - strand, within A4249_RS12465 at 2499.906 kb on - strand, within A4249_RS12465 at 2499.906 kb on - strand, within A4249_RS12465 at 2499.980 kb on + strand, within A4249_RS12465 at 2499.981 kb on - strand, within A4249_RS12465 at 2499.981 kb on - strand, within A4249_RS12465 at 2499.986 kb on + strand, within A4249_RS12465 at 2499.986 kb on + strand, within A4249_RS12465 at 2499.986 kb on + strand, within A4249_RS12465 at 2499.987 kb on - strand, within A4249_RS12465 at 2499.987 kb on - strand, within A4249_RS12465 at 2499.987 kb on - strand, within A4249_RS12465 at 2499.987 kb on - strand, within A4249_RS12465 at 2499.987 kb on - strand, within A4249_RS12465 at 2499.987 kb on - strand, within A4249_RS12465 at 2499.987 kb on - strand, within A4249_RS12465 at 2499.987 kb on - strand, within A4249_RS12465 at 2499.987 kb on - strand, within A4249_RS12465 at 2500.082 kb on + strand, within A4249_RS12465 at 2500.082 kb on + strand, within A4249_RS12465 at 2500.082 kb on + strand, within A4249_RS12465 at 2500.083 kb on - strand, within A4249_RS12465 at 2500.083 kb on - strand, within A4249_RS12465 at 2500.083 kb on - strand, within A4249_RS12465 at 2500.083 kb on - strand, within A4249_RS12465 at 2500.083 kb on - strand, within A4249_RS12465 at 2500.083 kb on - strand, within A4249_RS12465 at 2500.083 kb on - strand, within A4249_RS12465 at 2500.083 kb on - strand, within A4249_RS12465 at 2500.085 kb on + strand, within A4249_RS12465 at 2500.085 kb on + strand, within A4249_RS12465 at 2500.085 kb on + strand, within A4249_RS12465 at 2500.085 kb on + strand, within A4249_RS12465 at 2500.085 kb on + strand, within A4249_RS12465 at 2500.085 kb on + strand, within A4249_RS12465 at 2500.086 kb on - strand, within A4249_RS12465 at 2500.086 kb on - strand, within A4249_RS12465 at 2500.086 kb on - strand, within A4249_RS12465 at 2500.316 kb on + strand, within A4249_RS12470 at 2500.316 kb on + strand, within A4249_RS12470 at 2500.316 kb on + strand, within A4249_RS12470 at 2500.317 kb on - strand, within A4249_RS12470 at 2500.802 kb on - strand, within A4249_RS12470 at 2501.040 kb on + strand at 2501.040 kb on + strand at 2501.040 kb on + strand at 2501.040 kb on + strand at 2501.041 kb on - strand at 2501.251 kb on + strand, within A4249_RS12475 at 2501.252 kb on - strand, within A4249_RS12475 at 2501.488 kb on + strand, within A4249_RS12475 at 2501.488 kb on + strand, within A4249_RS12475 at 2501.489 kb on - strand, within A4249_RS12475 at 2501.519 kb on + strand, within A4249_RS12475 at 2501.519 kb on + strand, within A4249_RS12475 at 2501.519 kb on + strand, within A4249_RS12475 at 2501.519 kb on + strand, within A4249_RS12475 at 2501.519 kb on + strand, within A4249_RS12475 at 2501.519 kb on + strand, within A4249_RS12475 at 2501.519 kb on + strand, within A4249_RS12475 at 2501.519 kb on + strand, within A4249_RS12475 at 2501.519 kb on + strand, within A4249_RS12475 at 2501.519 kb on + strand, within A4249_RS12475 at 2501.519 kb on + strand, within A4249_RS12475 at 2501.520 kb on - strand, within A4249_RS12475 at 2501.520 kb on - strand, within A4249_RS12475 at 2501.520 kb on - strand, within A4249_RS12475 at 2501.520 kb on - strand, within A4249_RS12475 at 2501.520 kb on - strand, within A4249_RS12475 at 2501.520 kb on - strand, within A4249_RS12475 at 2501.612 kb on + strand at 2501.612 kb on + strand at 2501.612 kb on + strand at 2501.612 kb on + strand at 2501.613 kb on - strand at 2501.613 kb on - strand at 2501.613 kb on - strand at 2501.613 kb on - strand at 2501.613 kb on - strand at 2501.750 kb on - strand at 2501.832 kb on + strand, within A4249_RS12480 at 2501.833 kb on - strand, within A4249_RS12480 at 2501.833 kb on - strand, within A4249_RS12480 at 2501.833 kb on - strand, within A4249_RS12480 at 2501.833 kb on - strand, within A4249_RS12480 at 2501.833 kb on - strand, within A4249_RS12480 at 2501.833 kb on - strand, within A4249_RS12480 at 2501.994 kb on + strand, within A4249_RS12480 at 2501.994 kb on + strand, within A4249_RS12480 at 2501.994 kb on + strand, within A4249_RS12480 at 2501.994 kb on + strand, within A4249_RS12480 at 2501.994 kb on + strand, within A4249_RS12480 at 2501.994 kb on + strand, within A4249_RS12480 at 2501.994 kb on + strand, within A4249_RS12480 at 2501.994 kb on + strand, within A4249_RS12480 at 2501.994 kb on + strand, within A4249_RS12480 at 2501.995 kb on - strand, within A4249_RS12480 at 2501.995 kb on - strand, within A4249_RS12480 at 2501.995 kb on - strand, within A4249_RS12480 at 2501.995 kb on - strand, within A4249_RS12480 at 2501.995 kb on - strand, within A4249_RS12480
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 2,499,305 + +1.9 2,499,305 + -1.7 2,499,305 + -0.4 2,499,306 - +2.0 2,499,324 + -0.1 2,499,325 - +0.2 2,499,393 + A4249_RS12460 0.20 +0.0 2,499,394 - A4249_RS12460 0.20 +2.1 2,499,652 + +0.4 2,499,685 + -0.8 2,499,686 - -0.2 2,499,686 - +0.4 2,499,686 - +0.1 2,499,906 - A4249_RS12465 0.32 +0.2 2,499,906 - A4249_RS12465 0.32 +0.8 2,499,906 - A4249_RS12465 0.32 -0.6 2,499,980 + A4249_RS12465 0.51 +1.2 2,499,981 - A4249_RS12465 0.51 -0.3 2,499,981 - A4249_RS12465 0.51 -0.3 2,499,986 + A4249_RS12465 0.53 -2.1 2,499,986 + A4249_RS12465 0.53 +0.2 2,499,986 + A4249_RS12465 0.53 -0.8 2,499,987 - A4249_RS12465 0.53 -1.2 2,499,987 - A4249_RS12465 0.53 +0.4 2,499,987 - A4249_RS12465 0.53 -0.4 2,499,987 - A4249_RS12465 0.53 +0.2 2,499,987 - A4249_RS12465 0.53 -0.1 2,499,987 - A4249_RS12465 0.53 -0.9 2,499,987 - A4249_RS12465 0.53 -0.6 2,499,987 - A4249_RS12465 0.53 +0.3 2,499,987 - A4249_RS12465 0.53 +0.3 2,500,082 + A4249_RS12465 0.78 +0.5 2,500,082 + A4249_RS12465 0.78 +0.4 2,500,082 + A4249_RS12465 0.78 -0.0 2,500,083 - A4249_RS12465 0.78 +0.0 2,500,083 - A4249_RS12465 0.78 +0.6 2,500,083 - A4249_RS12465 0.78 +0.0 2,500,083 - A4249_RS12465 0.78 +0.0 2,500,083 - A4249_RS12465 0.78 -0.6 2,500,083 - A4249_RS12465 0.78 +1.2 2,500,083 - A4249_RS12465 0.78 -0.7 2,500,083 - A4249_RS12465 0.78 -0.1 2,500,085 + A4249_RS12465 0.79 +0.3 2,500,085 + A4249_RS12465 0.79 +0.2 2,500,085 + A4249_RS12465 0.79 +1.3 2,500,085 + A4249_RS12465 0.79 -1.3 2,500,085 + A4249_RS12465 0.79 +0.9 2,500,085 + A4249_RS12465 0.79 -0.5 2,500,086 - A4249_RS12465 0.79 +1.0 2,500,086 - A4249_RS12465 0.79 +0.1 2,500,086 - A4249_RS12465 0.79 -1.3 2,500,316 + A4249_RS12470 0.10 -0.6 2,500,316 + A4249_RS12470 0.10 -0.3 2,500,316 + A4249_RS12470 0.10 +0.0 2,500,317 - A4249_RS12470 0.10 +0.5 2,500,802 - A4249_RS12470 0.72 +0.5 2,501,040 + +2.1 2,501,040 + -0.5 2,501,040 + -1.0 2,501,040 + -1.8 2,501,041 - +0.6 2,501,251 + A4249_RS12475 0.27 +0.6 2,501,252 - A4249_RS12475 0.27 +1.3 2,501,488 + A4249_RS12475 0.68 +0.5 2,501,488 + A4249_RS12475 0.68 +1.4 2,501,489 - A4249_RS12475 0.69 -1.1 2,501,519 + A4249_RS12475 0.74 -0.0 2,501,519 + A4249_RS12475 0.74 +0.4 2,501,519 + A4249_RS12475 0.74 +0.8 2,501,519 + A4249_RS12475 0.74 -0.1 2,501,519 + A4249_RS12475 0.74 -1.3 2,501,519 + A4249_RS12475 0.74 +0.3 2,501,519 + A4249_RS12475 0.74 -0.4 2,501,519 + A4249_RS12475 0.74 +0.1 2,501,519 + A4249_RS12475 0.74 +0.4 2,501,519 + A4249_RS12475 0.74 -0.4 2,501,519 + A4249_RS12475 0.74 -0.0 2,501,520 - A4249_RS12475 0.74 -0.5 2,501,520 - A4249_RS12475 0.74 +1.0 2,501,520 - A4249_RS12475 0.74 -1.7 2,501,520 - A4249_RS12475 0.74 +0.1 2,501,520 - A4249_RS12475 0.74 +0.5 2,501,520 - A4249_RS12475 0.74 -0.3 2,501,612 + +0.6 2,501,612 + -0.2 2,501,612 + +0.0 2,501,612 + -0.4 2,501,613 - +0.5 2,501,613 - -0.1 2,501,613 - +1.4 2,501,613 - -0.4 2,501,613 - +0.4 2,501,750 - +0.0 2,501,832 + A4249_RS12480 0.15 -0.9 2,501,833 - A4249_RS12480 0.16 +0.7 2,501,833 - A4249_RS12480 0.16 +0.4 2,501,833 - A4249_RS12480 0.16 +0.8 2,501,833 - A4249_RS12480 0.16 +0.2 2,501,833 - A4249_RS12480 0.16 +0.4 2,501,833 - A4249_RS12480 0.16 +1.1 2,501,994 + A4249_RS12480 0.31 +0.3 2,501,994 + A4249_RS12480 0.31 +0.6 2,501,994 + A4249_RS12480 0.31 +0.5 2,501,994 + A4249_RS12480 0.31 -0.0 2,501,994 + A4249_RS12480 0.31 +0.6 2,501,994 + A4249_RS12480 0.31 +0.8 2,501,994 + A4249_RS12480 0.31 +1.5 2,501,994 + A4249_RS12480 0.31 +1.1 2,501,994 + A4249_RS12480 0.31 +1.8 2,501,995 - A4249_RS12480 0.31 +0.3 2,501,995 - A4249_RS12480 0.31 +0.9 2,501,995 - A4249_RS12480 0.31 +0.3 2,501,995 - A4249_RS12480 0.31 +0.1 2,501,995 - A4249_RS12480 0.31 +1.0
Or see this region's nucleotide sequence