Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11795

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11785 and A4249_RS11790 are separated by 125 nucleotidesA4249_RS11790 and A4249_RS11795 are separated by 312 nucleotidesA4249_RS11795 and A4249_RS11800 are separated by 310 nucleotides A4249_RS11785: A4249_RS11785 - single-stranded DNA-binding protein, at 2,366,639 to 2,367,064 _RS11785 A4249_RS11790: A4249_RS11790 - GcrA family cell cycle regulator, at 2,367,190 to 2,367,597 _RS11790 A4249_RS11795: A4249_RS11795 - DUF2493 domain-containing protein, at 2,367,910 to 2,368,848 _RS11795 A4249_RS11800: A4249_RS11800 - DUF3363 domain-containing protein, at 2,369,159 to 2,370,406 _RS11800 Position (kb) 2367 2368 2369Strain fitness (log2 ratio) -2 -1 0 1at 2366.921 kb on + strand, within A4249_RS11785at 2366.922 kb on - strand, within A4249_RS11785at 2367.035 kb on + strandat 2367.213 kb on + strandat 2367.213 kb on + strandat 2367.570 kb on + strandat 2367.570 kb on + strandat 2367.570 kb on + strandat 2367.570 kb on + strandat 2367.570 kb on + strandat 2367.571 kb on - strandat 2367.571 kb on - strandat 2368.087 kb on + strand, within A4249_RS11795at 2368.087 kb on + strand, within A4249_RS11795at 2368.534 kb on - strand, within A4249_RS11795at 2369.020 kb on + strandat 2369.020 kb on + strandat 2369.020 kb on + strandat 2369.020 kb on + strandat 2369.030 kb on + strandat 2369.030 kb on + strandat 2369.031 kb on - strandat 2369.031 kb on - strandat 2369.031 kb on - strandat 2369.184 kb on + strandat 2369.184 kb on + strandat 2369.185 kb on - strandat 2369.471 kb on + strand, within A4249_RS11800at 2369.472 kb on - strand, within A4249_RS11800at 2369.798 kb on + strand, within A4249_RS11800at 2369.798 kb on + strand, within A4249_RS11800at 2369.799 kb on - strand, within A4249_RS11800at 2369.799 kb on - strand, within A4249_RS11800at 2369.799 kb on - strand, within A4249_RS11800at 2369.799 kb on - strand, within A4249_RS11800at 2369.799 kb on - strand, within A4249_RS11800at 2369.808 kb on - strand, within A4249_RS11800

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,366,921 + A4249_RS11785 0.66 -0.9
2,366,922 - A4249_RS11785 0.66 -2.4
2,367,035 + +0.3
2,367,213 + -1.0
2,367,213 + -1.1
2,367,570 + -1.4
2,367,570 + -0.2
2,367,570 + +0.8
2,367,570 + +1.3
2,367,570 + -0.5
2,367,571 - +0.1
2,367,571 - +0.2
2,368,087 + A4249_RS11795 0.19 -0.1
2,368,087 + A4249_RS11795 0.19 -1.6
2,368,534 - A4249_RS11795 0.66 +0.5
2,369,020 + -0.1
2,369,020 + -0.7
2,369,020 + -0.2
2,369,020 + -0.3
2,369,030 + -0.2
2,369,030 + -0.1
2,369,031 - +0.2
2,369,031 - +0.9
2,369,031 - +0.3
2,369,184 + +0.9
2,369,184 + -0.1
2,369,185 - -1.4
2,369,471 + A4249_RS11800 0.25 -0.2
2,369,472 - A4249_RS11800 0.25 +0.3
2,369,798 + A4249_RS11800 0.51 +0.4
2,369,798 + A4249_RS11800 0.51 +0.3
2,369,799 - A4249_RS11800 0.51 +0.7
2,369,799 - A4249_RS11800 0.51 +1.2
2,369,799 - A4249_RS11800 0.51 -0.1
2,369,799 - A4249_RS11800 0.51 -1.1
2,369,799 - A4249_RS11800 0.51 +1.3
2,369,808 - A4249_RS11800 0.52 +0.0

Or see this region's nucleotide sequence