Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11210

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11200 and A4249_RS11205 are separated by 0 nucleotidesA4249_RS11205 and A4249_RS11210 are separated by 120 nucleotidesA4249_RS11210 and A4249_RS11215 are separated by 263 nucleotides A4249_RS11200: A4249_RS11200 - 4-hydroxyphenylpyruvate dioxygenase, at 2,257,061 to 2,258,140 _RS11200 A4249_RS11205: A4249_RS11205 - hypothetical protein, at 2,258,141 to 2,258,326 _RS11205 A4249_RS11210: A4249_RS11210 - hypothetical protein, at 2,258,447 to 2,258,644 _RS11210 A4249_RS11215: A4249_RS11215 - isoaspartyl peptidase/L-asparaginase, at 2,258,908 to 2,259,972 _RS11215 Position (kb) 2258 2259Strain fitness (log2 ratio) -2 -1 0 1at 2257.448 kb on + strand, within A4249_RS11200at 2257.448 kb on + strand, within A4249_RS11200at 2257.448 kb on + strand, within A4249_RS11200at 2257.448 kb on + strand, within A4249_RS11200at 2257.448 kb on + strand, within A4249_RS11200at 2257.448 kb on + strand, within A4249_RS11200at 2257.448 kb on + strand, within A4249_RS11200at 2257.448 kb on + strand, within A4249_RS11200at 2257.448 kb on + strand, within A4249_RS11200at 2257.448 kb on + strand, within A4249_RS11200at 2257.448 kb on + strand, within A4249_RS11200at 2257.448 kb on + strand, within A4249_RS11200at 2257.449 kb on - strand, within A4249_RS11200at 2257.449 kb on - strand, within A4249_RS11200at 2257.449 kb on - strand, within A4249_RS11200at 2257.449 kb on - strand, within A4249_RS11200at 2257.449 kb on - strand, within A4249_RS11200at 2257.449 kb on - strand, within A4249_RS11200at 2257.449 kb on - strand, within A4249_RS11200at 2257.449 kb on - strand, within A4249_RS11200at 2257.449 kb on - strand, within A4249_RS11200at 2257.463 kb on + strand, within A4249_RS11200at 2257.463 kb on + strand, within A4249_RS11200at 2257.463 kb on + strand, within A4249_RS11200at 2257.464 kb on - strand, within A4249_RS11200at 2257.484 kb on + strand, within A4249_RS11200at 2257.484 kb on + strand, within A4249_RS11200at 2257.485 kb on - strand, within A4249_RS11200at 2257.485 kb on - strand, within A4249_RS11200at 2257.485 kb on - strand, within A4249_RS11200at 2257.610 kb on + strand, within A4249_RS11200at 2257.610 kb on + strand, within A4249_RS11200at 2257.610 kb on + strand, within A4249_RS11200at 2257.610 kb on + strand, within A4249_RS11200at 2257.610 kb on + strand, within A4249_RS11200at 2257.610 kb on + strand, within A4249_RS11200at 2257.610 kb on + strand, within A4249_RS11200at 2257.610 kb on + strand, within A4249_RS11200at 2257.611 kb on - strand, within A4249_RS11200at 2257.611 kb on - strand, within A4249_RS11200at 2257.611 kb on - strand, within A4249_RS11200at 2257.611 kb on - strand, within A4249_RS11200at 2257.611 kb on - strand, within A4249_RS11200at 2257.611 kb on - strand, within A4249_RS11200at 2257.611 kb on - strand, within A4249_RS11200at 2257.631 kb on + strand, within A4249_RS11200at 2257.644 kb on - strand, within A4249_RS11200at 2257.644 kb on - strand, within A4249_RS11200at 2257.644 kb on - strand, within A4249_RS11200at 2257.772 kb on + strand, within A4249_RS11200at 2257.773 kb on - strand, within A4249_RS11200at 2257.773 kb on - strand, within A4249_RS11200at 2257.880 kb on + strand, within A4249_RS11200at 2257.880 kb on + strand, within A4249_RS11200at 2257.880 kb on + strand, within A4249_RS11200at 2257.880 kb on + strand, within A4249_RS11200at 2257.880 kb on + strand, within A4249_RS11200at 2257.881 kb on - strand, within A4249_RS11200at 2257.881 kb on - strand, within A4249_RS11200at 2257.881 kb on - strand, within A4249_RS11200at 2257.881 kb on - strand, within A4249_RS11200at 2258.219 kb on + strand, within A4249_RS11205at 2258.219 kb on + strand, within A4249_RS11205at 2258.220 kb on - strand, within A4249_RS11205at 2258.291 kb on + strand, within A4249_RS11205at 2258.298 kb on + strand, within A4249_RS11205at 2258.298 kb on + strand, within A4249_RS11205at 2258.298 kb on + strand, within A4249_RS11205at 2258.299 kb on - strand, within A4249_RS11205at 2258.299 kb on - strand, within A4249_RS11205at 2258.299 kb on - strand, within A4249_RS11205at 2258.299 kb on - strand, within A4249_RS11205at 2258.299 kb on - strand, within A4249_RS11205at 2258.364 kb on + strandat 2258.365 kb on - strandat 2258.365 kb on - strandat 2258.438 kb on + strandat 2258.466 kb on + strandat 2258.467 kb on - strand, within A4249_RS11210at 2258.467 kb on - strand, within A4249_RS11210at 2258.467 kb on - strand, within A4249_RS11210at 2258.477 kb on + strand, within A4249_RS11210at 2258.477 kb on + strand, within A4249_RS11210at 2258.477 kb on + strand, within A4249_RS11210at 2258.555 kb on + strand, within A4249_RS11210at 2258.555 kb on + strand, within A4249_RS11210at 2258.555 kb on + strand, within A4249_RS11210at 2258.555 kb on + strand, within A4249_RS11210at 2258.555 kb on + strand, within A4249_RS11210at 2258.555 kb on + strand, within A4249_RS11210at 2258.555 kb on + strand, within A4249_RS11210at 2258.556 kb on - strand, within A4249_RS11210at 2258.556 kb on - strand, within A4249_RS11210at 2258.556 kb on - strand, within A4249_RS11210at 2258.556 kb on - strand, within A4249_RS11210at 2258.556 kb on - strand, within A4249_RS11210at 2258.556 kb on - strand, within A4249_RS11210at 2258.556 kb on - strand, within A4249_RS11210at 2258.679 kb on + strandat 2258.832 kb on + strandat 2258.833 kb on - strandat 2258.833 kb on - strandat 2258.844 kb on + strandat 2258.844 kb on + strandat 2258.844 kb on + strandat 2258.844 kb on + strandat 2258.844 kb on + strandat 2258.844 kb on + strandat 2258.845 kb on - strandat 2258.845 kb on - strandat 2258.845 kb on - strandat 2258.845 kb on - strandat 2258.847 kb on + strandat 2259.073 kb on + strand, within A4249_RS11215

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,257,448 + A4249_RS11200 0.36 +0.6
2,257,448 + A4249_RS11200 0.36 +0.1
2,257,448 + A4249_RS11200 0.36 +0.4
2,257,448 + A4249_RS11200 0.36 -1.3
2,257,448 + A4249_RS11200 0.36 +0.4
2,257,448 + A4249_RS11200 0.36 +0.2
2,257,448 + A4249_RS11200 0.36 +0.3
2,257,448 + A4249_RS11200 0.36 -0.8
2,257,448 + A4249_RS11200 0.36 -0.3
2,257,448 + A4249_RS11200 0.36 -0.9
2,257,448 + A4249_RS11200 0.36 -2.2
2,257,448 + A4249_RS11200 0.36 -0.4
2,257,449 - A4249_RS11200 0.36 +1.4
2,257,449 - A4249_RS11200 0.36 +0.5
2,257,449 - A4249_RS11200 0.36 -1.0
2,257,449 - A4249_RS11200 0.36 +1.1
2,257,449 - A4249_RS11200 0.36 -0.4
2,257,449 - A4249_RS11200 0.36 +1.3
2,257,449 - A4249_RS11200 0.36 -0.5
2,257,449 - A4249_RS11200 0.36 -0.2
2,257,449 - A4249_RS11200 0.36 +0.2
2,257,463 + A4249_RS11200 0.37 -1.2
2,257,463 + A4249_RS11200 0.37 -0.9
2,257,463 + A4249_RS11200 0.37 +0.9
2,257,464 - A4249_RS11200 0.37 -0.9
2,257,484 + A4249_RS11200 0.39 +0.9
2,257,484 + A4249_RS11200 0.39 -1.9
2,257,485 - A4249_RS11200 0.39 -0.3
2,257,485 - A4249_RS11200 0.39 +0.2
2,257,485 - A4249_RS11200 0.39 -1.0
2,257,610 + A4249_RS11200 0.51 -0.9
2,257,610 + A4249_RS11200 0.51 -0.2
2,257,610 + A4249_RS11200 0.51 +0.0
2,257,610 + A4249_RS11200 0.51 +0.6
2,257,610 + A4249_RS11200 0.51 +0.0
2,257,610 + A4249_RS11200 0.51 -0.1
2,257,610 + A4249_RS11200 0.51 -0.7
2,257,610 + A4249_RS11200 0.51 +0.3
2,257,611 - A4249_RS11200 0.51 +0.1
2,257,611 - A4249_RS11200 0.51 -2.0
2,257,611 - A4249_RS11200 0.51 -1.3
2,257,611 - A4249_RS11200 0.51 -0.8
2,257,611 - A4249_RS11200 0.51 -1.2
2,257,611 - A4249_RS11200 0.51 -1.1
2,257,611 - A4249_RS11200 0.51 +0.3
2,257,631 + A4249_RS11200 0.53 -0.3
2,257,644 - A4249_RS11200 0.54 +0.4
2,257,644 - A4249_RS11200 0.54 -0.2
2,257,644 - A4249_RS11200 0.54 -1.9
2,257,772 + A4249_RS11200 0.66 -0.3
2,257,773 - A4249_RS11200 0.66 +0.4
2,257,773 - A4249_RS11200 0.66 +1.2
2,257,880 + A4249_RS11200 0.76 +0.3
2,257,880 + A4249_RS11200 0.76 -0.7
2,257,880 + A4249_RS11200 0.76 -0.3
2,257,880 + A4249_RS11200 0.76 +0.5
2,257,880 + A4249_RS11200 0.76 +0.1
2,257,881 - A4249_RS11200 0.76 +0.7
2,257,881 - A4249_RS11200 0.76 -2.4
2,257,881 - A4249_RS11200 0.76 +0.1
2,257,881 - A4249_RS11200 0.76 +0.6
2,258,219 + A4249_RS11205 0.42 +1.3
2,258,219 + A4249_RS11205 0.42 -0.7
2,258,220 - A4249_RS11205 0.42 -0.5
2,258,291 + A4249_RS11205 0.81 -0.4
2,258,298 + A4249_RS11205 0.84 +0.8
2,258,298 + A4249_RS11205 0.84 -0.1
2,258,298 + A4249_RS11205 0.84 +1.3
2,258,299 - A4249_RS11205 0.85 +0.8
2,258,299 - A4249_RS11205 0.85 +1.2
2,258,299 - A4249_RS11205 0.85 -1.1
2,258,299 - A4249_RS11205 0.85 +0.3
2,258,299 - A4249_RS11205 0.85 -0.5
2,258,364 + -0.1
2,258,365 - -1.1
2,258,365 - +0.5
2,258,438 + +1.2
2,258,466 + -0.7
2,258,467 - A4249_RS11210 0.10 -0.1
2,258,467 - A4249_RS11210 0.10 +0.5
2,258,467 - A4249_RS11210 0.10 +0.4
2,258,477 + A4249_RS11210 0.15 -1.0
2,258,477 + A4249_RS11210 0.15 -0.1
2,258,477 + A4249_RS11210 0.15 -0.2
2,258,555 + A4249_RS11210 0.55 -1.5
2,258,555 + A4249_RS11210 0.55 -0.3
2,258,555 + A4249_RS11210 0.55 +0.1
2,258,555 + A4249_RS11210 0.55 -0.1
2,258,555 + A4249_RS11210 0.55 -0.3
2,258,555 + A4249_RS11210 0.55 -0.5
2,258,555 + A4249_RS11210 0.55 -0.8
2,258,556 - A4249_RS11210 0.55 +1.3
2,258,556 - A4249_RS11210 0.55 -0.3
2,258,556 - A4249_RS11210 0.55 +0.0
2,258,556 - A4249_RS11210 0.55 -1.3
2,258,556 - A4249_RS11210 0.55 +1.3
2,258,556 - A4249_RS11210 0.55 -1.7
2,258,556 - A4249_RS11210 0.55 -1.0
2,258,679 + +0.2
2,258,832 + +0.4
2,258,833 - +0.5
2,258,833 - -1.3
2,258,844 + -0.5
2,258,844 + -0.9
2,258,844 + -1.5
2,258,844 + +0.3
2,258,844 + +0.3
2,258,844 + +0.9
2,258,845 - -0.5
2,258,845 - -0.9
2,258,845 - -0.1
2,258,845 - +0.7
2,258,847 + -1.1
2,259,073 + A4249_RS11215 0.15 +0.8

Or see this region's nucleotide sequence