Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10715 and A4249_RS10720 overlap by 4 nucleotides A4249_RS10720 and A4249_RS10725 are separated by 48 nucleotides A4249_RS10725 and A4249_RS10730 overlap by 8 nucleotides A4249_RS10730 and A4249_RS10735 are separated by 1 nucleotides
A4249_RS10715: A4249_RS10715 - imidazole glycerol phosphate synthase subunit HisF, at 2,153,882 to 2,154,649
_RS10715
A4249_RS10720: A4249_RS10720 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE, at 2,154,646 to 2,155,269
_RS10720
A4249_RS10725: A4249_RS10725 - glucose-6-phosphate dehydrogenase, at 2,155,318 to 2,156,778
_RS10725
A4249_RS10730: A4249_RS10730 - 6-phosphogluconolactonase, at 2,156,771 to 2,157,487
_RS10730
A4249_RS10735: A4249_RS10735 - phosphogluconate dehydratase, at 2,157,489 to 2,159,378
_RS10735
Position (kb)
2155
2156
2157 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2154.437 kb on + strand, within A4249_RS10715 at 2154.438 kb on - strand, within A4249_RS10715 at 2154.639 kb on + strand at 2154.639 kb on + strand at 2154.639 kb on + strand at 2154.639 kb on + strand at 2154.639 kb on + strand at 2154.639 kb on + strand at 2154.639 kb on + strand at 2154.639 kb on + strand at 2154.639 kb on + strand at 2154.639 kb on + strand at 2154.640 kb on - strand at 2154.640 kb on - strand at 2154.640 kb on - strand at 2154.640 kb on - strand at 2154.640 kb on - strand at 2154.640 kb on - strand at 2154.640 kb on - strand at 2154.640 kb on - strand at 2154.742 kb on + strand, within A4249_RS10720 at 2154.742 kb on + strand, within A4249_RS10720 at 2154.742 kb on + strand, within A4249_RS10720 at 2154.742 kb on + strand, within A4249_RS10720 at 2154.742 kb on + strand, within A4249_RS10720 at 2154.742 kb on + strand, within A4249_RS10720 at 2154.742 kb on + strand, within A4249_RS10720 at 2154.742 kb on + strand, within A4249_RS10720 at 2154.743 kb on - strand, within A4249_RS10720 at 2154.743 kb on - strand, within A4249_RS10720 at 2154.743 kb on - strand, within A4249_RS10720 at 2154.743 kb on - strand, within A4249_RS10720 at 2154.743 kb on - strand, within A4249_RS10720 at 2154.743 kb on - strand, within A4249_RS10720 at 2154.743 kb on - strand, within A4249_RS10720 at 2154.743 kb on - strand, within A4249_RS10720 at 2154.743 kb on - strand, within A4249_RS10720 at 2154.743 kb on - strand, within A4249_RS10720 at 2154.743 kb on - strand, within A4249_RS10720 at 2154.744 kb on + strand, within A4249_RS10720 at 2154.745 kb on - strand, within A4249_RS10720 at 2154.745 kb on - strand, within A4249_RS10720 at 2155.171 kb on + strand, within A4249_RS10720 at 2155.171 kb on + strand, within A4249_RS10720 at 2155.171 kb on + strand, within A4249_RS10720 at 2155.171 kb on + strand, within A4249_RS10720 at 2155.171 kb on + strand, within A4249_RS10720 at 2155.172 kb on - strand, within A4249_RS10720 at 2155.172 kb on - strand, within A4249_RS10720 at 2155.172 kb on - strand, within A4249_RS10720 at 2155.172 kb on - strand, within A4249_RS10720 at 2155.172 kb on - strand, within A4249_RS10720 at 2155.172 kb on - strand, within A4249_RS10720 at 2155.172 kb on - strand, within A4249_RS10720 at 2155.172 kb on - strand, within A4249_RS10720 at 2155.201 kb on - strand, within A4249_RS10720 at 2155.267 kb on + strand at 2155.274 kb on + strand at 2155.274 kb on + strand at 2155.274 kb on + strand at 2155.274 kb on + strand at 2157.562 kb on - strand at 2157.715 kb on - strand, within A4249_RS10735 at 2157.715 kb on - strand, within A4249_RS10735 at 2157.715 kb on - strand, within A4249_RS10735 at 2157.715 kb on - strand, within A4249_RS10735
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 2,154,437 + A4249_RS10715 0.72 -0.7 2,154,438 - A4249_RS10715 0.72 -0.8 2,154,639 + +0.9 2,154,639 + -0.2 2,154,639 + +0.8 2,154,639 + -0.2 2,154,639 + +0.1 2,154,639 + -1.9 2,154,639 + -0.1 2,154,639 + -0.8 2,154,639 + +0.8 2,154,639 + -0.7 2,154,640 - -1.3 2,154,640 - -1.9 2,154,640 - +0.0 2,154,640 - +1.4 2,154,640 - -0.5 2,154,640 - +0.1 2,154,640 - +1.5 2,154,640 - -0.4 2,154,742 + A4249_RS10720 0.15 +0.0 2,154,742 + A4249_RS10720 0.15 -0.4 2,154,742 + A4249_RS10720 0.15 +0.8 2,154,742 + A4249_RS10720 0.15 -0.0 2,154,742 + A4249_RS10720 0.15 +0.9 2,154,742 + A4249_RS10720 0.15 -0.1 2,154,742 + A4249_RS10720 0.15 +0.3 2,154,742 + A4249_RS10720 0.15 +0.2 2,154,743 - A4249_RS10720 0.16 -0.4 2,154,743 - A4249_RS10720 0.16 -0.5 2,154,743 - A4249_RS10720 0.16 -0.9 2,154,743 - A4249_RS10720 0.16 -0.4 2,154,743 - A4249_RS10720 0.16 -0.3 2,154,743 - A4249_RS10720 0.16 +0.5 2,154,743 - A4249_RS10720 0.16 -1.2 2,154,743 - A4249_RS10720 0.16 +0.1 2,154,743 - A4249_RS10720 0.16 -0.6 2,154,743 - A4249_RS10720 0.16 -0.3 2,154,743 - A4249_RS10720 0.16 -0.2 2,154,744 + A4249_RS10720 0.16 -0.7 2,154,745 - A4249_RS10720 0.16 -0.5 2,154,745 - A4249_RS10720 0.16 -0.7 2,155,171 + A4249_RS10720 0.84 +1.1 2,155,171 + A4249_RS10720 0.84 -0.2 2,155,171 + A4249_RS10720 0.84 -1.1 2,155,171 + A4249_RS10720 0.84 -0.5 2,155,171 + A4249_RS10720 0.84 -0.0 2,155,172 - A4249_RS10720 0.84 -1.3 2,155,172 - A4249_RS10720 0.84 -1.8 2,155,172 - A4249_RS10720 0.84 -0.9 2,155,172 - A4249_RS10720 0.84 -0.4 2,155,172 - A4249_RS10720 0.84 +0.4 2,155,172 - A4249_RS10720 0.84 -0.3 2,155,172 - A4249_RS10720 0.84 -1.0 2,155,172 - A4249_RS10720 0.84 -0.9 2,155,201 - A4249_RS10720 0.89 +0.2 2,155,267 + +0.1 2,155,274 + +1.7 2,155,274 + -0.4 2,155,274 + +0.5 2,155,274 + +0.1 2,157,562 - +1.9 2,157,715 - A4249_RS10735 0.12 -0.5 2,157,715 - A4249_RS10735 0.12 +1.3 2,157,715 - A4249_RS10735 0.12 +0.7 2,157,715 - A4249_RS10735 0.12 +0.3
Or see this region's nucleotide sequence