Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10230

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10225 and A4249_RS10230 are separated by 44 nucleotidesA4249_RS10230 and A4249_RS10235 are separated by 95 nucleotidesA4249_RS10235 and A4249_RS10240 overlap by 4 nucleotides A4249_RS10225: A4249_RS10225 - energy transducer TonB, at 2,052,675 to 2,053,841 _RS10225 A4249_RS10230: A4249_RS10230 - ABC transporter substrate-binding protein, at 2,053,886 to 2,054,926 _RS10230 A4249_RS10235: A4249_RS10235 - hypothetical protein, at 2,055,022 to 2,055,924 _RS10235 A4249_RS10240: A4249_RS10240 - DUF2336 domain-containing protein, at 2,055,921 to 2,057,036 _RS10240 Position (kb) 2053 2054 2055Strain fitness (log2 ratio) -2 -1 0 1at 2052.971 kb on + strand, within A4249_RS10225at 2052.971 kb on + strand, within A4249_RS10225at 2052.971 kb on + strand, within A4249_RS10225at 2052.972 kb on - strand, within A4249_RS10225at 2052.972 kb on - strand, within A4249_RS10225at 2053.128 kb on + strand, within A4249_RS10225at 2053.128 kb on + strand, within A4249_RS10225at 2053.129 kb on - strand, within A4249_RS10225at 2053.129 kb on - strand, within A4249_RS10225at 2053.249 kb on - strand, within A4249_RS10225at 2053.257 kb on + strand, within A4249_RS10225at 2053.258 kb on - strand, within A4249_RS10225at 2053.258 kb on - strand, within A4249_RS10225at 2053.370 kb on + strand, within A4249_RS10225at 2053.370 kb on + strand, within A4249_RS10225at 2053.371 kb on - strand, within A4249_RS10225at 2053.371 kb on - strand, within A4249_RS10225at 2053.371 kb on - strand, within A4249_RS10225at 2053.458 kb on + strand, within A4249_RS10225at 2053.458 kb on + strand, within A4249_RS10225at 2053.458 kb on + strand, within A4249_RS10225at 2053.459 kb on - strand, within A4249_RS10225at 2053.459 kb on - strand, within A4249_RS10225at 2053.576 kb on - strand, within A4249_RS10225at 2053.660 kb on + strand, within A4249_RS10225at 2053.660 kb on + strand, within A4249_RS10225at 2053.660 kb on + strand, within A4249_RS10225at 2053.660 kb on + strand, within A4249_RS10225at 2053.661 kb on - strand, within A4249_RS10225at 2053.661 kb on - strand, within A4249_RS10225at 2053.661 kb on - strand, within A4249_RS10225at 2053.661 kb on - strand, within A4249_RS10225at 2053.661 kb on - strand, within A4249_RS10225at 2053.661 kb on - strand, within A4249_RS10225at 2053.661 kb on - strand, within A4249_RS10225at 2053.765 kb on + strandat 2053.765 kb on + strandat 2053.765 kb on + strandat 2053.766 kb on - strandat 2053.766 kb on - strandat 2053.766 kb on - strandat 2053.779 kb on + strandat 2053.779 kb on + strandat 2053.779 kb on + strandat 2053.779 kb on + strandat 2053.780 kb on - strandat 2053.780 kb on - strandat 2053.780 kb on - strandat 2053.780 kb on - strandat 2053.780 kb on - strandat 2054.971 kb on - strandat 2054.986 kb on - strandat 2054.986 kb on - strandat 2054.986 kb on - strandat 2055.124 kb on + strand, within A4249_RS10235at 2055.124 kb on + strand, within A4249_RS10235at 2055.124 kb on + strand, within A4249_RS10235at 2055.124 kb on + strand, within A4249_RS10235at 2055.124 kb on + strand, within A4249_RS10235at 2055.125 kb on - strand, within A4249_RS10235at 2055.125 kb on - strand, within A4249_RS10235at 2055.125 kb on - strand, within A4249_RS10235at 2055.372 kb on + strand, within A4249_RS10235at 2055.372 kb on + strand, within A4249_RS10235at 2055.372 kb on + strand, within A4249_RS10235at 2055.372 kb on + strand, within A4249_RS10235at 2055.372 kb on + strand, within A4249_RS10235at 2055.372 kb on + strand, within A4249_RS10235at 2055.373 kb on - strand, within A4249_RS10235at 2055.373 kb on - strand, within A4249_RS10235at 2055.373 kb on - strand, within A4249_RS10235at 2055.384 kb on - strand, within A4249_RS10235at 2055.384 kb on - strand, within A4249_RS10235at 2055.399 kb on - strand, within A4249_RS10235at 2055.442 kb on + strand, within A4249_RS10235at 2055.443 kb on - strand, within A4249_RS10235at 2055.443 kb on - strand, within A4249_RS10235at 2055.613 kb on + strand, within A4249_RS10235at 2055.613 kb on + strand, within A4249_RS10235at 2055.613 kb on + strand, within A4249_RS10235at 2055.613 kb on + strand, within A4249_RS10235at 2055.614 kb on - strand, within A4249_RS10235at 2055.614 kb on - strand, within A4249_RS10235at 2055.614 kb on - strand, within A4249_RS10235at 2055.614 kb on - strand, within A4249_RS10235at 2055.614 kb on - strand, within A4249_RS10235at 2055.718 kb on + strand, within A4249_RS10235at 2055.718 kb on + strand, within A4249_RS10235at 2055.721 kb on + strand, within A4249_RS10235at 2055.721 kb on + strand, within A4249_RS10235at 2055.721 kb on + strand, within A4249_RS10235at 2055.721 kb on + strand, within A4249_RS10235at 2055.722 kb on - strand, within A4249_RS10235at 2055.722 kb on - strand, within A4249_RS10235at 2055.781 kb on + strand, within A4249_RS10235at 2055.781 kb on + strand, within A4249_RS10235at 2055.782 kb on - strand, within A4249_RS10235at 2055.782 kb on - strand, within A4249_RS10235at 2055.782 kb on - strand, within A4249_RS10235at 2055.782 kb on - strand, within A4249_RS10235

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,052,971 + A4249_RS10225 0.25 +1.4
2,052,971 + A4249_RS10225 0.25 -0.7
2,052,971 + A4249_RS10225 0.25 -1.4
2,052,972 - A4249_RS10225 0.25 +1.4
2,052,972 - A4249_RS10225 0.25 -0.2
2,053,128 + A4249_RS10225 0.39 +1.5
2,053,128 + A4249_RS10225 0.39 -0.4
2,053,129 - A4249_RS10225 0.39 +0.7
2,053,129 - A4249_RS10225 0.39 +1.0
2,053,249 - A4249_RS10225 0.49 +0.8
2,053,257 + A4249_RS10225 0.50 -1.5
2,053,258 - A4249_RS10225 0.50 +0.1
2,053,258 - A4249_RS10225 0.50 -0.5
2,053,370 + A4249_RS10225 0.60 -1.2
2,053,370 + A4249_RS10225 0.60 +0.5
2,053,371 - A4249_RS10225 0.60 -0.6
2,053,371 - A4249_RS10225 0.60 -0.6
2,053,371 - A4249_RS10225 0.60 -1.2
2,053,458 + A4249_RS10225 0.67 -0.7
2,053,458 + A4249_RS10225 0.67 -0.9
2,053,458 + A4249_RS10225 0.67 +0.2
2,053,459 - A4249_RS10225 0.67 +0.3
2,053,459 - A4249_RS10225 0.67 -0.1
2,053,576 - A4249_RS10225 0.77 -1.1
2,053,660 + A4249_RS10225 0.84 +0.4
2,053,660 + A4249_RS10225 0.84 -0.5
2,053,660 + A4249_RS10225 0.84 -0.2
2,053,660 + A4249_RS10225 0.84 +0.5
2,053,661 - A4249_RS10225 0.84 -0.1
2,053,661 - A4249_RS10225 0.84 -0.1
2,053,661 - A4249_RS10225 0.84 +0.3
2,053,661 - A4249_RS10225 0.84 +1.3
2,053,661 - A4249_RS10225 0.84 +1.4
2,053,661 - A4249_RS10225 0.84 -1.2
2,053,661 - A4249_RS10225 0.84 -0.6
2,053,765 + -0.2
2,053,765 + -0.5
2,053,765 + +0.3
2,053,766 - -1.3
2,053,766 - +0.4
2,053,766 - +0.0
2,053,779 + -0.3
2,053,779 + +0.0
2,053,779 + +0.1
2,053,779 + -0.0
2,053,780 - +0.7
2,053,780 - -0.3
2,053,780 - -1.3
2,053,780 - +0.5
2,053,780 - -0.4
2,054,971 - -0.1
2,054,986 - -1.5
2,054,986 - -0.5
2,054,986 - +0.7
2,055,124 + A4249_RS10235 0.11 +0.8
2,055,124 + A4249_RS10235 0.11 -0.1
2,055,124 + A4249_RS10235 0.11 +0.1
2,055,124 + A4249_RS10235 0.11 -0.6
2,055,124 + A4249_RS10235 0.11 -0.1
2,055,125 - A4249_RS10235 0.11 -0.9
2,055,125 - A4249_RS10235 0.11 +1.6
2,055,125 - A4249_RS10235 0.11 +0.9
2,055,372 + A4249_RS10235 0.39 -0.7
2,055,372 + A4249_RS10235 0.39 -1.1
2,055,372 + A4249_RS10235 0.39 +0.4
2,055,372 + A4249_RS10235 0.39 -0.5
2,055,372 + A4249_RS10235 0.39 -0.5
2,055,372 + A4249_RS10235 0.39 +0.2
2,055,373 - A4249_RS10235 0.39 +0.3
2,055,373 - A4249_RS10235 0.39 +0.1
2,055,373 - A4249_RS10235 0.39 +0.5
2,055,384 - A4249_RS10235 0.40 -0.5
2,055,384 - A4249_RS10235 0.40 -0.2
2,055,399 - A4249_RS10235 0.42 +0.5
2,055,442 + A4249_RS10235 0.47 +1.3
2,055,443 - A4249_RS10235 0.47 +0.1
2,055,443 - A4249_RS10235 0.47 +0.3
2,055,613 + A4249_RS10235 0.65 +0.4
2,055,613 + A4249_RS10235 0.65 +0.1
2,055,613 + A4249_RS10235 0.65 +0.1
2,055,613 + A4249_RS10235 0.65 -0.3
2,055,614 - A4249_RS10235 0.66 +1.2
2,055,614 - A4249_RS10235 0.66 -0.2
2,055,614 - A4249_RS10235 0.66 -0.2
2,055,614 - A4249_RS10235 0.66 +0.6
2,055,614 - A4249_RS10235 0.66 -0.5
2,055,718 + A4249_RS10235 0.77 -0.5
2,055,718 + A4249_RS10235 0.77 -0.3
2,055,721 + A4249_RS10235 0.77 -0.2
2,055,721 + A4249_RS10235 0.77 +0.1
2,055,721 + A4249_RS10235 0.77 +0.2
2,055,721 + A4249_RS10235 0.77 -1.9
2,055,722 - A4249_RS10235 0.78 -0.3
2,055,722 - A4249_RS10235 0.78 -0.2
2,055,781 + A4249_RS10235 0.84 +0.0
2,055,781 + A4249_RS10235 0.84 +0.8
2,055,782 - A4249_RS10235 0.84 -0.2
2,055,782 - A4249_RS10235 0.84 +0.6
2,055,782 - A4249_RS10235 0.84 +0.4
2,055,782 - A4249_RS10235 0.84 +0.0

Or see this region's nucleotide sequence