Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS09470 and A4249_RS09475 are separated by 178 nucleotides A4249_RS09475 and A4249_RS09480 are separated by 86 nucleotides A4249_RS09480 and A4249_RS09485 overlap by 4 nucleotides A4249_RS09485 and A4249_RS09490 are separated by 67 nucleotides
A4249_RS09470: A4249_RS09470 - dihydroorotase, at 1,891,967 to 1,893,298
_RS09470
A4249_RS09475: A4249_RS09475 - glycosyltransferase family 9 protein, at 1,893,477 to 1,894,442
_RS09475
A4249_RS09480: A4249_RS09480 - hypothetical protein, at 1,894,529 to 1,894,759
_RS09480
A4249_RS09485: A4249_RS09485 - hypothetical protein, at 1,894,756 to 1,895,322
_RS09485
A4249_RS09490: A4249_RS09490 - response regulator, at 1,895,390 to 1,896,778
_RS09490
Position (kb) 1893
1894
1895 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1893.334 kb on + strand at 1893.334 kb on + strand at 1893.334 kb on + strand at 1893.334 kb on + strand at 1893.334 kb on + strand at 1893.334 kb on + strand at 1893.334 kb on + strand at 1893.334 kb on + strand at 1893.334 kb on + strand at 1893.334 kb on + strand at 1893.334 kb on + strand at 1893.334 kb on + strand at 1893.335 kb on - strand at 1893.335 kb on - strand at 1893.335 kb on - strand at 1893.335 kb on - strand at 1893.335 kb on - strand at 1893.335 kb on - strand at 1893.335 kb on - strand at 1893.337 kb on + strand at 1893.337 kb on + strand at 1893.337 kb on + strand at 1893.337 kb on + strand at 1893.337 kb on + strand at 1893.337 kb on + strand at 1893.337 kb on + strand at 1893.337 kb on + strand at 1893.337 kb on + strand at 1893.337 kb on + strand at 1893.337 kb on + strand at 1893.338 kb on - strand at 1893.338 kb on - strand at 1893.338 kb on - strand at 1893.338 kb on - strand at 1893.338 kb on - strand at 1893.338 kb on - strand at 1893.338 kb on - strand at 1893.338 kb on - strand at 1893.339 kb on + strand at 1893.339 kb on + strand at 1893.339 kb on + strand at 1893.339 kb on + strand at 1893.339 kb on + strand at 1893.339 kb on + strand at 1893.339 kb on + strand at 1893.340 kb on - strand at 1893.340 kb on - strand at 1893.340 kb on - strand at 1893.340 kb on - strand at 1893.340 kb on - strand at 1893.340 kb on - strand at 1893.340 kb on - strand at 1893.340 kb on - strand at 1893.408 kb on - strand at 1893.418 kb on + strand at 1893.419 kb on - strand at 1893.419 kb on - strand at 1893.419 kb on - strand at 1893.478 kb on + strand at 1893.478 kb on + strand at 1893.478 kb on + strand at 1893.478 kb on + strand at 1893.478 kb on + strand at 1893.478 kb on + strand at 1893.478 kb on + strand at 1893.478 kb on + strand at 1893.478 kb on + strand at 1893.479 kb on - strand at 1893.479 kb on - strand at 1893.479 kb on - strand at 1893.479 kb on - strand at 1893.479 kb on - strand at 1893.479 kb on - strand at 1893.542 kb on + strand at 1893.542 kb on + strand at 1893.542 kb on + strand at 1893.542 kb on + strand at 1893.542 kb on + strand at 1893.542 kb on + strand at 1893.542 kb on + strand at 1893.542 kb on + strand at 1893.542 kb on + strand at 1893.542 kb on + strand at 1893.542 kb on + strand at 1893.543 kb on - strand at 1893.543 kb on - strand at 1893.543 kb on - strand at 1893.543 kb on - strand at 1893.543 kb on - strand at 1893.543 kb on - strand at 1893.543 kb on - strand at 1893.543 kb on - strand at 1893.543 kb on - strand at 1893.543 kb on - strand at 1893.543 kb on - strand at 1893.543 kb on - strand at 1893.543 kb on - strand at 1893.543 kb on - strand at 1893.543 kb on - strand at 1893.592 kb on + strand, within A4249_RS09475 at 1893.592 kb on + strand, within A4249_RS09475 at 1893.592 kb on + strand, within A4249_RS09475 at 1893.593 kb on - strand, within A4249_RS09475 at 1893.593 kb on - strand, within A4249_RS09475 at 1893.593 kb on - strand, within A4249_RS09475 at 1893.593 kb on - strand, within A4249_RS09475 at 1893.593 kb on - strand, within A4249_RS09475 at 1893.593 kb on - strand, within A4249_RS09475 at 1893.593 kb on - strand, within A4249_RS09475 at 1893.593 kb on - strand, within A4249_RS09475 at 1893.593 kb on - strand, within A4249_RS09475 at 1893.724 kb on + strand, within A4249_RS09475 at 1893.724 kb on + strand, within A4249_RS09475 at 1893.724 kb on + strand, within A4249_RS09475 at 1893.724 kb on + strand, within A4249_RS09475 at 1893.724 kb on + strand, within A4249_RS09475 at 1893.725 kb on - strand, within A4249_RS09475 at 1893.725 kb on - strand, within A4249_RS09475 at 1893.725 kb on - strand, within A4249_RS09475 at 1893.725 kb on - strand, within A4249_RS09475 at 1893.725 kb on - strand, within A4249_RS09475 at 1893.725 kb on - strand, within A4249_RS09475 at 1893.919 kb on + strand, within A4249_RS09475 at 1894.042 kb on + strand, within A4249_RS09475 at 1894.042 kb on + strand, within A4249_RS09475 at 1894.042 kb on + strand, within A4249_RS09475 at 1894.042 kb on + strand, within A4249_RS09475 at 1894.042 kb on + strand, within A4249_RS09475 at 1894.042 kb on + strand, within A4249_RS09475 at 1894.042 kb on + strand, within A4249_RS09475 at 1894.042 kb on + strand, within A4249_RS09475 at 1894.042 kb on + strand, within A4249_RS09475 at 1894.042 kb on + strand, within A4249_RS09475 at 1894.042 kb on + strand, within A4249_RS09475 at 1894.042 kb on + strand, within A4249_RS09475 at 1894.042 kb on + strand, within A4249_RS09475 at 1894.042 kb on + strand, within A4249_RS09475 at 1894.042 kb on + strand, within A4249_RS09475 at 1894.043 kb on - strand, within A4249_RS09475 at 1894.043 kb on - strand, within A4249_RS09475 at 1894.043 kb on - strand, within A4249_RS09475 at 1894.043 kb on - strand, within A4249_RS09475 at 1894.043 kb on - strand, within A4249_RS09475 at 1894.043 kb on - strand, within A4249_RS09475 at 1894.043 kb on - strand, within A4249_RS09475 at 1894.043 kb on - strand, within A4249_RS09475 at 1894.289 kb on + strand, within A4249_RS09475 at 1894.417 kb on + strand at 1894.417 kb on + strand at 1894.417 kb on + strand at 1894.417 kb on + strand at 1894.417 kb on + strand at 1894.417 kb on + strand at 1894.417 kb on + strand at 1894.417 kb on + strand at 1894.418 kb on - strand at 1894.418 kb on - strand at 1894.418 kb on - strand at 1894.455 kb on - strand at 1894.455 kb on - strand at 1894.465 kb on + strand at 1894.465 kb on + strand at 1894.465 kb on + strand at 1894.466 kb on - strand at 1894.466 kb on - strand at 1894.516 kb on + strand at 1894.516 kb on + strand at 1894.516 kb on + strand at 1894.613 kb on + strand, within A4249_RS09480 at 1894.614 kb on - strand, within A4249_RS09480 at 1894.614 kb on - strand, within A4249_RS09480 at 1894.614 kb on - strand, within A4249_RS09480 at 1894.614 kb on - strand, within A4249_RS09480 at 1894.652 kb on + strand, within A4249_RS09480 at 1894.653 kb on - strand, within A4249_RS09480 at 1894.867 kb on + strand, within A4249_RS09485 at 1894.867 kb on + strand, within A4249_RS09485 at 1894.868 kb on - strand, within A4249_RS09485 at 1894.868 kb on - strand, within A4249_RS09485 at 1894.868 kb on - strand, within A4249_RS09485 at 1894.923 kb on + strand, within A4249_RS09485 at 1894.923 kb on + strand, within A4249_RS09485 at 1894.923 kb on + strand, within A4249_RS09485 at 1894.924 kb on - strand, within A4249_RS09485 at 1894.924 kb on - strand, within A4249_RS09485 at 1894.988 kb on + strand, within A4249_RS09485 at 1895.032 kb on + strand, within A4249_RS09485 at 1895.032 kb on + strand, within A4249_RS09485 at 1895.032 kb on + strand, within A4249_RS09485 at 1895.032 kb on + strand, within A4249_RS09485 at 1895.032 kb on + strand, within A4249_RS09485 at 1895.032 kb on + strand, within A4249_RS09485 at 1895.032 kb on + strand, within A4249_RS09485 at 1895.032 kb on + strand, within A4249_RS09485 at 1895.033 kb on - strand, within A4249_RS09485 at 1895.033 kb on - strand, within A4249_RS09485 at 1895.033 kb on - strand, within A4249_RS09485 at 1895.033 kb on - strand, within A4249_RS09485 at 1895.033 kb on - strand, within A4249_RS09485 at 1895.146 kb on + strand, within A4249_RS09485 at 1895.146 kb on + strand, within A4249_RS09485 at 1895.147 kb on - strand, within A4249_RS09485 at 1895.147 kb on - strand, within A4249_RS09485 at 1895.147 kb on - strand, within A4249_RS09485 at 1895.147 kb on - strand, within A4249_RS09485 at 1895.287 kb on + strand at 1895.331 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 1,893,334 + +1.3 1,893,334 + -0.1 1,893,334 + +0.0 1,893,334 + -0.6 1,893,334 + +1.0 1,893,334 + -0.1 1,893,334 + +0.6 1,893,334 + +0.7 1,893,334 + -1.1 1,893,334 + +0.6 1,893,334 + -0.4 1,893,334 + +0.1 1,893,335 - +0.2 1,893,335 - -0.6 1,893,335 - +1.3 1,893,335 - +0.4 1,893,335 - -0.2 1,893,335 - -0.4 1,893,335 - +0.2 1,893,337 + +1.4 1,893,337 + +0.0 1,893,337 + +0.2 1,893,337 + -0.8 1,893,337 + -0.1 1,893,337 + +0.5 1,893,337 + -0.6 1,893,337 + +0.1 1,893,337 + +0.3 1,893,337 + +0.1 1,893,337 + -0.4 1,893,338 - -0.5 1,893,338 - -0.6 1,893,338 - -1.1 1,893,338 - -0.1 1,893,338 - +1.0 1,893,338 - -0.1 1,893,338 - -0.8 1,893,338 - -0.6 1,893,339 + -0.4 1,893,339 + +0.1 1,893,339 + -0.0 1,893,339 + +0.0 1,893,339 + -0.3 1,893,339 + -0.6 1,893,339 + -0.2 1,893,340 - +0.0 1,893,340 - +1.1 1,893,340 - -0.6 1,893,340 - -1.3 1,893,340 - +0.8 1,893,340 - +0.6 1,893,340 - -0.3 1,893,340 - +0.7 1,893,408 - -0.1 1,893,418 + -0.9 1,893,419 - -0.6 1,893,419 - -0.7 1,893,419 - +0.4 1,893,478 + +0.7 1,893,478 + +0.8 1,893,478 + +1.2 1,893,478 + -0.5 1,893,478 + -0.1 1,893,478 + +0.1 1,893,478 + +1.6 1,893,478 + +0.8 1,893,478 + -0.5 1,893,479 - -0.5 1,893,479 - +0.1 1,893,479 - +0.2 1,893,479 - +0.1 1,893,479 - +0.2 1,893,479 - -0.5 1,893,542 + +0.9 1,893,542 + +1.0 1,893,542 + -0.0 1,893,542 + +0.4 1,893,542 + -1.8 1,893,542 + -0.4 1,893,542 + -0.7 1,893,542 + -0.7 1,893,542 + -0.1 1,893,542 + -0.3 1,893,542 + +0.2 1,893,543 - +1.1 1,893,543 - -0.6 1,893,543 - -0.5 1,893,543 - -0.0 1,893,543 - -0.1 1,893,543 - -0.1 1,893,543 - -0.8 1,893,543 - +0.0 1,893,543 - -0.3 1,893,543 - -1.1 1,893,543 - +1.5 1,893,543 - +0.1 1,893,543 - -0.2 1,893,543 - -0.0 1,893,543 - -0.4 1,893,592 + A4249_RS09475 0.12 -0.2 1,893,592 + A4249_RS09475 0.12 +0.7 1,893,592 + A4249_RS09475 0.12 +1.3 1,893,593 - A4249_RS09475 0.12 -0.2 1,893,593 - A4249_RS09475 0.12 -1.1 1,893,593 - A4249_RS09475 0.12 +1.0 1,893,593 - A4249_RS09475 0.12 +0.1 1,893,593 - A4249_RS09475 0.12 +0.3 1,893,593 - A4249_RS09475 0.12 +0.3 1,893,593 - A4249_RS09475 0.12 -1.5 1,893,593 - A4249_RS09475 0.12 +0.4 1,893,593 - A4249_RS09475 0.12 -1.3 1,893,724 + A4249_RS09475 0.26 -1.8 1,893,724 + A4249_RS09475 0.26 -0.7 1,893,724 + A4249_RS09475 0.26 -1.0 1,893,724 + A4249_RS09475 0.26 +0.0 1,893,724 + A4249_RS09475 0.26 +0.5 1,893,725 - A4249_RS09475 0.26 -0.7 1,893,725 - A4249_RS09475 0.26 -1.7 1,893,725 - A4249_RS09475 0.26 -1.4 1,893,725 - A4249_RS09475 0.26 -0.5 1,893,725 - A4249_RS09475 0.26 +0.4 1,893,725 - A4249_RS09475 0.26 -0.0 1,893,919 + A4249_RS09475 0.46 -0.6 1,894,042 + A4249_RS09475 0.58 -0.7 1,894,042 + A4249_RS09475 0.58 -0.8 1,894,042 + A4249_RS09475 0.58 -1.2 1,894,042 + A4249_RS09475 0.58 +1.5 1,894,042 + A4249_RS09475 0.58 +1.3 1,894,042 + A4249_RS09475 0.58 -0.1 1,894,042 + A4249_RS09475 0.58 +0.7 1,894,042 + A4249_RS09475 0.58 -0.2 1,894,042 + A4249_RS09475 0.58 +0.6 1,894,042 + A4249_RS09475 0.58 +0.4 1,894,042 + A4249_RS09475 0.58 -1.0 1,894,042 + A4249_RS09475 0.58 -1.1 1,894,042 + A4249_RS09475 0.58 -0.9 1,894,042 + A4249_RS09475 0.58 +1.3 1,894,042 + A4249_RS09475 0.58 -0.9 1,894,043 - A4249_RS09475 0.59 +0.4 1,894,043 - A4249_RS09475 0.59 +1.8 1,894,043 - A4249_RS09475 0.59 -0.3 1,894,043 - A4249_RS09475 0.59 +0.2 1,894,043 - A4249_RS09475 0.59 +0.7 1,894,043 - A4249_RS09475 0.59 +0.4 1,894,043 - A4249_RS09475 0.59 +0.6 1,894,043 - A4249_RS09475 0.59 -0.9 1,894,289 + A4249_RS09475 0.84 +0.0 1,894,417 + +1.3 1,894,417 + +0.3 1,894,417 + -1.1 1,894,417 + +0.6 1,894,417 + -0.5 1,894,417 + -0.5 1,894,417 + -0.1 1,894,417 + -1.7 1,894,418 - -0.4 1,894,418 - -0.5 1,894,418 - +0.2 1,894,455 - -0.4 1,894,455 - +0.6 1,894,465 + -1.5 1,894,465 + +0.9 1,894,465 + +0.4 1,894,466 - -1.5 1,894,466 - -0.7 1,894,516 + -0.9 1,894,516 + +2.1 1,894,516 + -0.9 1,894,613 + A4249_RS09480 0.36 -0.4 1,894,614 - A4249_RS09480 0.37 +0.5 1,894,614 - A4249_RS09480 0.37 -0.3 1,894,614 - A4249_RS09480 0.37 +0.4 1,894,614 - A4249_RS09480 0.37 +0.5 1,894,652 + A4249_RS09480 0.53 +0.2 1,894,653 - A4249_RS09480 0.54 +0.8 1,894,867 + A4249_RS09485 0.20 -0.4 1,894,867 + A4249_RS09485 0.20 +0.2 1,894,868 - A4249_RS09485 0.20 -0.1 1,894,868 - A4249_RS09485 0.20 -0.2 1,894,868 - A4249_RS09485 0.20 +0.1 1,894,923 + A4249_RS09485 0.29 -0.4 1,894,923 + A4249_RS09485 0.29 -0.8 1,894,923 + A4249_RS09485 0.29 -0.3 1,894,924 - A4249_RS09485 0.30 +0.0 1,894,924 - A4249_RS09485 0.30 +0.1 1,894,988 + A4249_RS09485 0.41 +0.0 1,895,032 + A4249_RS09485 0.49 +1.1 1,895,032 + A4249_RS09485 0.49 -0.2 1,895,032 + A4249_RS09485 0.49 +0.6 1,895,032 + A4249_RS09485 0.49 +1.1 1,895,032 + A4249_RS09485 0.49 +0.8 1,895,032 + A4249_RS09485 0.49 +1.0 1,895,032 + A4249_RS09485 0.49 -0.6 1,895,032 + A4249_RS09485 0.49 +0.6 1,895,033 - A4249_RS09485 0.49 -1.9 1,895,033 - A4249_RS09485 0.49 +0.6 1,895,033 - A4249_RS09485 0.49 -1.1 1,895,033 - A4249_RS09485 0.49 -1.1 1,895,033 - A4249_RS09485 0.49 +0.2 1,895,146 + A4249_RS09485 0.69 +0.3 1,895,146 + A4249_RS09485 0.69 -0.4 1,895,147 - A4249_RS09485 0.69 +0.0 1,895,147 - A4249_RS09485 0.69 -0.2 1,895,147 - A4249_RS09485 0.69 -0.5 1,895,147 - A4249_RS09485 0.69 +0.5 1,895,287 + -0.1 1,895,331 + -0.7
Or see this region's nucleotide sequence