Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS08055

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS08050 and A4249_RS08055 are separated by 109 nucleotidesA4249_RS08055 and A4249_RS08060 are separated by 145 nucleotidesA4249_RS08060 and A4249_RS08065 are separated by 81 nucleotides A4249_RS08050: A4249_RS08050 - elongation factor Tu, at 1,610,361 to 1,611,551 _RS08050 A4249_RS08055: A4249_RS08055 - elongation factor G, at 1,611,661 to 1,613,739 _RS08055 A4249_RS08060: A4249_RS08060 - 30S ribosomal protein S7, at 1,613,885 to 1,614,358 _RS08060 A4249_RS08065: A4249_RS08065 - 30S ribosomal protein S12, at 1,614,440 to 1,614,814 _RS08065 Position (kb) 1611 1612 1613 1614Strain fitness (log2 ratio) -1 0 1 2at 1610.950 kb on + strand, within A4249_RS08050at 1611.557 kb on - strandat 1611.563 kb on + strandat 1611.563 kb on + strandat 1611.563 kb on + strandat 1611.564 kb on - strandat 1611.564 kb on - strandat 1611.564 kb on - strandat 1611.564 kb on - strandat 1611.564 kb on - strandat 1611.564 kb on - strandat 1611.564 kb on - strandat 1611.633 kb on - strandat 1611.633 kb on - strandat 1611.633 kb on - strandat 1611.633 kb on - strandat 1611.633 kb on - strandat 1611.633 kb on - strandat 1611.633 kb on - strandat 1611.633 kb on - strandat 1611.634 kb on + strandat 1611.635 kb on - strandat 1611.635 kb on - strandat 1611.635 kb on - strandat 1611.635 kb on - strandat 1611.635 kb on - strandat 1611.635 kb on - strandat 1611.635 kb on - strandat 1611.635 kb on - strandat 1611.669 kb on - strandat 1613.824 kb on - strandat 1613.824 kb on - strandat 1613.857 kb on - strandat 1614.442 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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1,610,950 + A4249_RS08050 0.49 +1.9
1,611,557 - -0.8
1,611,563 + +1.3
1,611,563 + +2.1
1,611,563 + +0.8
1,611,564 - -0.4
1,611,564 - -0.5
1,611,564 - +0.4
1,611,564 - +0.1
1,611,564 - +0.0
1,611,564 - +0.0
1,611,564 - +0.1
1,611,633 - +0.1
1,611,633 - +0.3
1,611,633 - +0.1
1,611,633 - +0.5
1,611,633 - -0.7
1,611,633 - +0.3
1,611,633 - -1.7
1,611,633 - -0.5
1,611,634 + -0.2
1,611,635 - -0.2
1,611,635 - +0.3
1,611,635 - -1.1
1,611,635 - -0.4
1,611,635 - +0.3
1,611,635 - +0.2
1,611,635 - +0.5
1,611,635 - +0.2
1,611,669 - -0.2
1,613,824 - +0.9
1,613,824 - +0.9
1,613,857 - -0.6
1,614,442 - +0.5

Or see this region's nucleotide sequence