Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS07840 and A4249_RS07845 are separated by 0 nucleotides A4249_RS07845 and A4249_RS07850 are separated by 279 nucleotides A4249_RS07850 and A4249_RS07855 overlap by 4 nucleotides A4249_RS07855 and A4249_RS07860 are separated by 17 nucleotides
A4249_RS07840: A4249_RS07840 - DUF938 domain-containing protein, at 1,569,385 to 1,570,020
_RS07840
A4249_RS07845: A4249_RS07845 - hypothetical protein, at 1,570,021 to 1,570,512
_RS07845
A4249_RS07850: A4249_RS07850 - pseudouridine synthase, at 1,570,792 to 1,571,571
_RS07850
A4249_RS07855: A4249_RS07855 - ATPase, at 1,571,568 to 1,572,320
_RS07855
A4249_RS07860: A4249_RS07860 - putative 2OG-Fe(II) oxygenase, at 1,572,338 to 1,573,822
_RS07860
Position (kb)
1570
1571
1572 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1569.821 kb on - strand, within A4249_RS07840 at 1569.829 kb on + strand, within A4249_RS07840 at 1570.291 kb on - strand, within A4249_RS07845 at 1570.466 kb on + strand at 1570.466 kb on + strand at 1570.603 kb on + strand at 1570.659 kb on + strand at 1570.660 kb on - strand at 1570.661 kb on + strand at 1570.662 kb on - strand at 1570.662 kb on - strand at 1570.711 kb on - strand at 1570.714 kb on - strand at 1570.714 kb on - strand at 1570.714 kb on - strand at 1570.760 kb on - strand at 1570.760 kb on - strand at 1570.810 kb on + strand at 1570.810 kb on + strand at 1570.810 kb on + strand at 1570.810 kb on + strand at 1570.810 kb on + strand at 1570.810 kb on + strand at 1570.810 kb on + strand at 1570.810 kb on + strand at 1570.810 kb on + strand at 1570.810 kb on + strand at 1570.810 kb on + strand at 1570.810 kb on + strand at 1570.810 kb on + strand at 1570.811 kb on - strand at 1570.811 kb on - strand at 1570.811 kb on - strand at 1570.811 kb on - strand at 1570.811 kb on - strand at 1571.038 kb on + strand, within A4249_RS07850 at 1571.038 kb on + strand, within A4249_RS07850 at 1571.251 kb on + strand, within A4249_RS07850 at 1571.251 kb on + strand, within A4249_RS07850 at 1571.251 kb on + strand, within A4249_RS07850 at 1571.251 kb on + strand, within A4249_RS07850 at 1571.252 kb on - strand, within A4249_RS07850 at 1571.252 kb on - strand, within A4249_RS07850 at 1571.252 kb on - strand, within A4249_RS07850 at 1571.252 kb on - strand, within A4249_RS07850 at 1571.334 kb on - strand, within A4249_RS07850 at 1571.398 kb on + strand, within A4249_RS07850 at 1571.398 kb on + strand, within A4249_RS07850 at 1571.398 kb on + strand, within A4249_RS07850 at 1571.398 kb on + strand, within A4249_RS07850 at 1571.399 kb on - strand, within A4249_RS07850 at 1571.399 kb on - strand, within A4249_RS07850 at 1571.399 kb on - strand, within A4249_RS07850 at 1571.444 kb on + strand, within A4249_RS07850 at 1571.444 kb on + strand, within A4249_RS07850 at 1571.444 kb on + strand, within A4249_RS07850 at 1571.444 kb on + strand, within A4249_RS07850 at 1571.445 kb on - strand, within A4249_RS07850 at 1571.445 kb on - strand, within A4249_RS07850 at 1571.445 kb on - strand, within A4249_RS07850 at 1571.445 kb on - strand, within A4249_RS07850 at 1571.445 kb on - strand, within A4249_RS07850 at 1571.445 kb on - strand, within A4249_RS07850 at 1571.477 kb on + strand, within A4249_RS07850 at 1571.570 kb on - strand at 1572.412 kb on + strand at 1572.412 kb on + strand at 1572.412 kb on + strand at 1572.412 kb on + strand at 1572.412 kb on + strand at 1572.412 kb on + strand at 1572.412 kb on + strand at 1572.412 kb on + strand at 1572.412 kb on + strand at 1572.412 kb on + strand at 1572.412 kb on + strand at 1572.412 kb on + strand at 1572.412 kb on + strand at 1572.412 kb on + strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.413 kb on - strand at 1572.414 kb on + strand at 1572.414 kb on + strand at 1572.414 kb on + strand at 1572.414 kb on + strand at 1572.414 kb on + strand at 1572.414 kb on + strand at 1572.414 kb on + strand at 1572.414 kb on + strand at 1572.414 kb on + strand at 1572.415 kb on - strand at 1572.415 kb on - strand at 1572.415 kb on - strand at 1572.415 kb on - strand at 1572.415 kb on - strand at 1572.415 kb on - strand at 1572.415 kb on - strand at 1572.415 kb on - strand at 1572.415 kb on - strand at 1572.415 kb on - strand at 1572.415 kb on - strand at 1572.415 kb on - strand at 1572.415 kb on - strand at 1572.415 kb on - strand at 1572.415 kb on - strand at 1572.452 kb on + strand at 1572.452 kb on + strand at 1572.452 kb on + strand at 1572.452 kb on + strand at 1572.452 kb on + strand at 1572.452 kb on + strand at 1572.452 kb on + strand at 1572.452 kb on + strand at 1572.452 kb on + strand at 1572.452 kb on + strand at 1572.452 kb on + strand at 1572.453 kb on - strand at 1572.453 kb on - strand at 1572.453 kb on - strand at 1572.453 kb on - strand at 1572.453 kb on - strand at 1572.453 kb on - strand at 1572.453 kb on - strand at 1572.453 kb on - strand at 1572.453 kb on - strand at 1572.453 kb on - strand at 1572.456 kb on + strand at 1572.456 kb on + strand at 1572.456 kb on + strand at 1572.456 kb on + strand at 1572.456 kb on + strand at 1572.456 kb on + strand at 1572.456 kb on + strand at 1572.456 kb on + strand at 1572.456 kb on + strand at 1572.456 kb on + strand at 1572.456 kb on + strand at 1572.456 kb on + strand at 1572.456 kb on + strand at 1572.456 kb on + strand at 1572.456 kb on + strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand at 1572.457 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 1,569,821 - A4249_RS07840 0.69 -0.4 1,569,829 + A4249_RS07840 0.70 -0.1 1,570,291 - A4249_RS07845 0.55 +0.7 1,570,466 + -1.4 1,570,466 + +0.3 1,570,603 + -0.7 1,570,659 + -0.7 1,570,660 - +0.1 1,570,661 + +0.4 1,570,662 - -1.2 1,570,662 - +0.6 1,570,711 - +0.1 1,570,714 - +0.4 1,570,714 - -0.8 1,570,714 - +1.5 1,570,760 - -1.4 1,570,760 - -2.0 1,570,810 + -0.1 1,570,810 + +0.2 1,570,810 + -0.5 1,570,810 + +0.9 1,570,810 + +0.4 1,570,810 + -0.6 1,570,810 + -0.9 1,570,810 + +0.6 1,570,810 + +0.3 1,570,810 + +0.3 1,570,810 + -0.7 1,570,810 + -0.6 1,570,810 + -0.3 1,570,811 - +1.2 1,570,811 - +0.3 1,570,811 - +0.7 1,570,811 - -0.1 1,570,811 - +1.0 1,571,038 + A4249_RS07850 0.32 +1.3 1,571,038 + A4249_RS07850 0.32 -0.3 1,571,251 + A4249_RS07850 0.59 -0.9 1,571,251 + A4249_RS07850 0.59 +0.2 1,571,251 + A4249_RS07850 0.59 +0.1 1,571,251 + A4249_RS07850 0.59 +1.3 1,571,252 - A4249_RS07850 0.59 +0.1 1,571,252 - A4249_RS07850 0.59 +1.0 1,571,252 - A4249_RS07850 0.59 -0.1 1,571,252 - A4249_RS07850 0.59 +0.2 1,571,334 - A4249_RS07850 0.69 +0.5 1,571,398 + A4249_RS07850 0.78 +0.2 1,571,398 + A4249_RS07850 0.78 +0.5 1,571,398 + A4249_RS07850 0.78 +0.5 1,571,398 + A4249_RS07850 0.78 -1.2 1,571,399 - A4249_RS07850 0.78 -0.8 1,571,399 - A4249_RS07850 0.78 -0.1 1,571,399 - A4249_RS07850 0.78 -1.0 1,571,444 + A4249_RS07850 0.84 +0.5 1,571,444 + A4249_RS07850 0.84 +0.9 1,571,444 + A4249_RS07850 0.84 +0.1 1,571,444 + A4249_RS07850 0.84 -0.5 1,571,445 - A4249_RS07850 0.84 +0.5 1,571,445 - A4249_RS07850 0.84 +2.3 1,571,445 - A4249_RS07850 0.84 +0.7 1,571,445 - A4249_RS07850 0.84 +1.5 1,571,445 - A4249_RS07850 0.84 -0.2 1,571,445 - A4249_RS07850 0.84 -1.3 1,571,477 + A4249_RS07850 0.88 -0.8 1,571,570 - -0.1 1,572,412 + +1.1 1,572,412 + -0.1 1,572,412 + +0.7 1,572,412 + +0.5 1,572,412 + +0.9 1,572,412 + -0.5 1,572,412 + -0.4 1,572,412 + -1.7 1,572,412 + -0.6 1,572,412 + -1.3 1,572,412 + +0.9 1,572,412 + -0.8 1,572,412 + -0.3 1,572,412 + +0.1 1,572,413 - +0.5 1,572,413 - +0.4 1,572,413 - +0.1 1,572,413 - -0.8 1,572,413 - +0.5 1,572,413 - -0.7 1,572,413 - -1.6 1,572,413 - -0.4 1,572,413 - +0.3 1,572,413 - -0.6 1,572,413 - +0.7 1,572,413 - +0.1 1,572,413 - -0.3 1,572,413 - -0.7 1,572,413 - -0.1 1,572,413 - +2.1 1,572,413 - +0.9 1,572,413 - -0.7 1,572,413 - -0.8 1,572,413 - -0.6 1,572,413 - -0.4 1,572,414 + +0.2 1,572,414 + +1.0 1,572,414 + -0.1 1,572,414 + -0.1 1,572,414 + -1.0 1,572,414 + -0.4 1,572,414 + +0.2 1,572,414 + +0.7 1,572,414 + +1.1 1,572,415 - -0.1 1,572,415 - +0.4 1,572,415 - -1.8 1,572,415 - -0.1 1,572,415 - -0.2 1,572,415 - +0.1 1,572,415 - +0.4 1,572,415 - -0.3 1,572,415 - -2.2 1,572,415 - -0.6 1,572,415 - +0.8 1,572,415 - -0.8 1,572,415 - +0.8 1,572,415 - +0.6 1,572,415 - +0.6 1,572,452 + +0.4 1,572,452 + +0.7 1,572,452 + +0.1 1,572,452 + -0.4 1,572,452 + -0.1 1,572,452 + -2.5 1,572,452 + +0.5 1,572,452 + -0.5 1,572,452 + +0.6 1,572,452 + -1.5 1,572,452 + -0.1 1,572,453 - -1.8 1,572,453 - +1.4 1,572,453 - -0.1 1,572,453 - -0.1 1,572,453 - +0.6 1,572,453 - +0.6 1,572,453 - +0.2 1,572,453 - -0.3 1,572,453 - +0.8 1,572,453 - +0.4 1,572,456 + -2.1 1,572,456 + +0.2 1,572,456 + +0.2 1,572,456 + +0.9 1,572,456 + -0.2 1,572,456 + -0.4 1,572,456 + -0.3 1,572,456 + +0.4 1,572,456 + +0.3 1,572,456 + -0.2 1,572,456 + +0.6 1,572,456 + -0.1 1,572,456 + +0.5 1,572,456 + -0.0 1,572,456 + -0.2 1,572,457 - -0.1 1,572,457 - +0.5 1,572,457 - -0.1 1,572,457 - -0.8 1,572,457 - -0.0 1,572,457 - -0.0 1,572,457 - +0.3 1,572,457 - +0.3 1,572,457 - -0.4 1,572,457 - -1.9 1,572,457 - +1.5 1,572,457 - -0.1 1,572,457 - -0.4 1,572,457 - +0.4 1,572,457 - -0.3 1,572,457 - -1.2 1,572,457 - +0.7 1,572,457 - -0.2 1,572,457 - +1.1 1,572,457 - -0.7 1,572,457 - +0.2
Or see this region's nucleotide sequence